RNA–Protein interactions for RNA: ENST00000554498.1

SLC38A6-219, Transcript of solute carrier family 38 member 6, humanhuman

TSL 3

Gene SLC38A6, Length 470 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A6-219ENST00000554498 PIGXQ8TBF5 258 aa-0.28□□□□□ -2.45
SLC38A6-219ENST00000554498 PLAC4Q8WY50 150 aa-0.28□□□□□ -2.45
SLC38A6-219ENST00000554498 RAB8BQ92930 207 aa-0.28□□□□□ -2.45
SLC38A6-219ENST00000554498 ADAT3Q96EY9 351 aaPredicted RBP-0.28□□□□□ -2.45
SLC38A6-219ENST00000554498 C20orf27Q9GZN8 174 aa-0.28□□□□□ -2.45
SLC38A6-219ENST00000554498 C6orf62Q9GZU0 229 aaPredicted RBP-0.28□□□□□ -2.45
SLC38A6-219ENST00000554498 CHMP4BQ9H444 224 aaKnown RBP-0.28□□□□□ -2.45
SLC38A6-219ENST00000554498 PRTFDC1Q9NRG1 225 aa-0.28□□□□□ -2.45
SLC38A6-219ENST00000554498 MED29Q9NX70 200 aa-0.28□□□□□ -2.45
SLC38A6-219ENST00000554498 HECW1Q76N89 1606 aa-0.28□□□□□ -2.45
SLC38A6-219ENST00000554498 MED1Q15648 1581 aaPredicted RBP-0.28□□□□□ -2.45
SLC38A6-219ENST00000554498 NEO1Q92859 1461 aa-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 BCL9O00512 1426 aa-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 TNS3Q68CZ2 1445 aa-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 STAB1Q9NY15 2570 aa-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 JMJD1CQ15652 2540 aa-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 ERICH2A1L162 156 aa-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 NUPR2A6NF83 97 aa-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 H0Y980 276 aa-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 SMIM10L2AP0DMW4 78 aa-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 SMIM10L2BP0DMW5 78 aa-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 CCL4P13236 92 aa-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 HIST1H1TP22492 207 aaPredicted RBP-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 FXYD6P3P58550 94 aa-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 RPS20P60866 119 aaKnown RBP-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 YPEL3P61236 119 aaPredicted RBP-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 SNRPD2P62316 118 aaKnown RBP-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 TSNQ15631 228 aaKnown RBP-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 KRTAP6-1Q3LI64 71 aa-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 C10orf99Q6UWK7 81 aa-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 TRAPPC6BQ86SZ2 158 aa-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 PRR15Q8IV56 129 aa-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 C20orf196Q8IYI0 205 aa-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 OR51D1Q8NGF3 324 aa-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 OR2T35Q8NGX2 323 aa-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 TMEM254Q8TBM7 123 aa-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 WFDC5Q8TCV5 224 aa-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 SLC35B4Q969S0 331 aa-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 PPP1R2P1Q96PQ5 205 aa-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 TP53RKQ96S44 253 aa-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 GPER1Q99527 375 aa-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 BCL2L10Q9HD36 194 aa-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 UTP11Q9Y3A2 253 aaKnown RBP-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 TMEM56-RWDD3S4R434 201 aa-0.29□□□□□ -2.46
SLC38A6-219ENST00000554498 KDM6AO15550 1401 aaPredicted RBP-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 NUP155O75694 1391 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 PTPRDP23468 1912 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 EVC2Q86UK5 1308 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 MGAMO43451 1857 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 HECW2Q9P2P5 1572 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 A0A087X0T9 212 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 ZNF727A8MUV8 499 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 E7EUB6 86 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 F8W1H4 67 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 M0QZ92 97 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 SLC16A4O15374 487 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 GADD45GO95257 159 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 APOEP02649 317 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 S100A4P26447 101 aaKnown RBP-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 ANP32AP39687 249 aaKnown RBP-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 RPL5P46777 297 aaKnown RBP-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 TCL1AP56279 114 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 FXYD4P59646 89 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 ROMO1P60602 79 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 DYNLT1P63172 113 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 SKP1P63208 163 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 ASB16-AS1Q495Z4 193 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 SPATA45Q537H7 98 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 Q5BKY6 102 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 CD200R1LQ6Q8B3 271 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 C2orf82Q6UX34 121 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 C12orf45Q8N5I9 185 aaPredicted RBP-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 ANKRD29Q8N6D5 301 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 GDPD1Q8N9F7 314 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 OR52E6Q96RD3 313 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 HIST1H2BLQ99880 126 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 UPF3BQ9BZI7 483 aaKnown RBP-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 WFDC10AQ9H1F0 79 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 TMEM138Q9NPI0 162 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 IDI2-AS1Q9NZ38 188 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 MRPL27Q9P0M9 148 aaKnown RBP-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 CYSLTR1Q9Y271 337 aa-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 WRNQ14191 1432 aaPredicted RBP eCLIP-0.3□□□□□ -2.46
SLC38A6-219ENST00000554498 RIMBP3CA6NJZ7 1639 aa-0.31□□□□□ -2.46
SLC38A6-219ENST00000554498 RIMBP3BA6NNM3 1639 aa-0.31□□□□□ -2.46
SLC38A6-219ENST00000554498 RFX7Q2KHR2 1363 aa-0.31□□□□□ -2.46
SLC38A6-219ENST00000554498 RIMBP3Q9UFD9 1639 aa-0.31□□□□□ -2.46
SLC38A6-219ENST00000554498 A0A087WSZ3 146 aa-0.31□□□□□ -2.46
SLC38A6-219ENST00000554498 TRAV10A0A0B4J240 114 aa-0.31□□□□□ -2.46
SLC38A6-219ENST00000554498 TRAV26-2A0A0B4J265 109 aa-0.31□□□□□ -2.46
SLC38A6-219ENST00000554498 OR4C46A6NHA9 309 aa-0.31□□□□□ -2.46
SLC38A6-219ENST00000554498 B4DSR2 109 aa-0.31□□□□□ -2.46
SLC38A6-219ENST00000554498 LRRN3E7EW58 273 aa-0.31□□□□□ -2.46
SLC38A6-219ENST00000554498 JMJD7-PLA2G4BH0Y9G9 81 aa-0.31□□□□□ -2.46
SLC38A6-219ENST00000554498 H3BRM9 83 aa-0.31□□□□□ -2.46
SLC38A6-219ENST00000554498 SPINK1P00995 79 aa-0.31□□□□□ -2.46
SLC38A6-219ENST00000554498 ISG15P05161 165 aa-0.31□□□□□ -2.46
SLC38A6-219ENST00000554498 CD2P06729 351 aa-0.31□□□□□ -2.46
SLC38A6-219ENST00000554498 CD14P08571 375 aa-0.31□□□□□ -2.46
SLC38A6-219ENST00000554498 OCM2P0CE71 109 aa-0.31□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms