RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 OR2J3O76001 311 aa4.85□□□□□ -1.63
SCFD1-212ENST00000554486 CST7O76096 145 aa4.85□□□□□ -1.63
SCFD1-212ENST00000554486 C1QBP02746 253 aa4.85□□□□□ -1.63
SCFD1-212ENST00000554486 IFNA4P05014 189 aa4.85□□□□□ -1.63
SCFD1-212ENST00000554486 OR8U8P0C7N1 319 aa4.85□□□□□ -1.63
SCFD1-212ENST00000554486 DEFA4P12838 97 aa4.85□□□□□ -1.63
SCFD1-212ENST00000554486 RPL12P30050 165 aaKnown RBP4.85□□□□□ -1.63
SCFD1-212ENST00000554486 RAB9AP51151 201 aa4.85□□□□□ -1.63
SCFD1-212ENST00000554486 CAV2P51636 162 aa4.85□□□□□ -1.63
SCFD1-212ENST00000554486 SUB1P53999 127 aaKnown RBP eCLIP4.85□□□□□ -1.63
SCFD1-212ENST00000554486 ATP5IP56385 69 aaPredicted RBP4.85□□□□□ -1.63
SCFD1-212ENST00000554486 KRTAP10-3P60369 221 aa4.85□□□□□ -1.63
SCFD1-212ENST00000554486 RHOGP84095 191 aa4.85□□□□□ -1.63
SCFD1-212ENST00000554486 EWSR1Q01844 656 aaKnown RBP eCLIP4.85□□□□□ -1.63
SCFD1-212ENST00000554486 TCTEX1D4Q5JR98 221 aa4.85□□□□□ -1.63
SCFD1-212ENST00000554486 TEX38Q6PEX7 206 aa4.85□□□□□ -1.63
SCFD1-212ENST00000554486 C9orf47Q6ZRZ4 202 aa4.85□□□□□ -1.63
SCFD1-212ENST00000554486 CENPVQ7Z7K6 275 aaPredicted RBP4.85□□□□□ -1.63
SCFD1-212ENST00000554486 ZNF546Q86UE3 836 aa4.85□□□□□ -1.63
SCFD1-212ENST00000554486 OR5AU1Q8NGC0 362 aa4.85□□□□□ -1.63
SCFD1-212ENST00000554486 MYOZ3Q8TDC0 251 aa4.85□□□□□ -1.63
SCFD1-212ENST00000554486 RNASEH2CQ8TDP1 164 aaKnown RBP4.85□□□□□ -1.63
SCFD1-212ENST00000554486 MS4A10Q96PG2 267 aa4.85□□□□□ -1.63
SCFD1-212ENST00000554486 AQP10Q96PS8 301 aa4.85□□□□□ -1.63
SCFD1-212ENST00000554486 GON7Q9BXV9 100 aa4.85□□□□□ -1.63
SCFD1-212ENST00000554486 ZNF355PQ9NSJ1 428 aa4.85□□□□□ -1.63
SCFD1-212ENST00000554486 MRPL36Q9P0J6 103 aaKnown RBP4.85□□□□□ -1.63
SCFD1-212ENST00000554486 PAIP2BQ9ULR5 123 aaKnown RBP4.85□□□□□ -1.63
SCFD1-212ENST00000554486 TNFSF18Q9UNG2 199 aa4.85□□□□□ -1.63
SCFD1-212ENST00000554486 STAB1Q9NY15 2570 aa4.85□□□□□ -1.63
SCFD1-212ENST00000554486 WNK1Q9H4A3 2382 aa4.84□□□□□ -1.63
SCFD1-212ENST00000554486 IGHV3-21A0A0B4J1V1 117 aa4.84□□□□□ -1.63
SCFD1-212ENST00000554486 MFSD2BA6NFX1 497 aa4.84□□□□□ -1.63
SCFD1-212ENST00000554486 FAM223BA6NKX1 122 aa4.84□□□□□ -1.63
SCFD1-212ENST00000554486 HMSDA8MTL9 139 aa4.84□□□□□ -1.63
SCFD1-212ENST00000554486 CYB5BO43169 146 aa4.84□□□□□ -1.63
SCFD1-212ENST00000554486 PAGE4O60829 102 aa4.84□□□□□ -1.63
SCFD1-212ENST00000554486 PFDN1O60925 122 aa4.84□□□□□ -1.63
SCFD1-212ENST00000554486 MT-CO2P00403 227 aa4.84□□□□□ -1.63
SCFD1-212ENST00000554486 IGHV3-48P01763 117 aa4.84□□□□□ -1.63
SCFD1-212ENST00000554486 TRGV3P03979 118 aa4.84□□□□□ -1.63
SCFD1-212ENST00000554486 CD28P10747 220 aa4.84□□□□□ -1.63
SCFD1-212ENST00000554486 HIST1H1BP16401 226 aaKnown RBP4.84□□□□□ -1.63
SCFD1-212ENST00000554486 CXCL2P19875 107 aa4.84□□□□□ -1.63
SCFD1-212ENST00000554486 GPX4P36969 197 aaPredicted RBP4.84□□□□□ -1.63
SCFD1-212ENST00000554486 SULT1A1P50225 295 aa4.84□□□□□ -1.63
SCFD1-212ENST00000554486 TPPP2P59282 170 aa4.84□□□□□ -1.63
SCFD1-212ENST00000554486 RAB11AP62491 216 aa4.84□□□□□ -1.63
SCFD1-212ENST00000554486 SLC35B1P78383 322 aa4.84□□□□□ -1.63
SCFD1-212ENST00000554486 EXOSC2Q13868 293 aaKnown RBP4.84□□□□□ -1.63
SCFD1-212ENST00000554486 OR8G2PQ6IF36 304 aa4.84□□□□□ -1.63
SCFD1-212ENST00000554486 FAM223AQ8IWN6 122 aa4.84□□□□□ -1.63
SCFD1-212ENST00000554486 ZNF491Q8N8L2 437 aa4.84□□□□□ -1.63
SCFD1-212ENST00000554486 NECAP1Q8NC96 275 aa4.84□□□□□ -1.63
SCFD1-212ENST00000554486 OR1L6Q8NGR2 347 aa4.84□□□□□ -1.63
SCFD1-212ENST00000554486 C19orf24Q9BVV8 132 aa4.84□□□□□ -1.63
SCFD1-212ENST00000554486 SLC25A31Q9H0C2 315 aa4.84□□□□□ -1.63
SCFD1-212ENST00000554486 WFDC1Q9HC57 220 aa4.84□□□□□ -1.63
SCFD1-212ENST00000554486 HSPB11Q9Y547 144 aa4.84□□□□□ -1.63
SCFD1-212ENST00000554486 S4R3C0 116 aa4.84□□□□□ -1.63
SCFD1-212ENST00000554486 VWFP04275 2813 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 IGHV4-28A0A0C4DH34 117 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 A0A1B0GUS0 222 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 USP17L23D6RBM5 183 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 BOLA2-SMG1P6H3BVE0 249 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 CORTO00230 105 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 ARPC5O15511 151 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 IGHV3-23P01764 117 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 OPRK1P41145 380 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 EIF2B2P49770 351 aaKnown RBP4.83□□□□□ -1.64
SCFD1-212ENST00000554486 NKX2-5P52952 324 aaPredicted RBP4.83□□□□□ -1.64
SCFD1-212ENST00000554486 DLK1P80370 383 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 ATP5G2Q06055 141 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 BAXQ07812 192 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 SLC38A11Q08AI6 406 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 OR2F1Q13607 317 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 GAMTQ14353 236 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 C15orf32Q32M92 178 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 LGALSLQ3ZCW2 172 aaPredicted RBP4.83□□□□□ -1.64
SCFD1-212ENST00000554486 ZFP69Q49AA0 526 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 LCE1AQ5T7P2 110 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 LAMTOR1Q6IAA8 161 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 C18orf65Q6ZTR6 163 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 ACOT7LQ6ZUV0 252 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 SLC16A13Q7RTY0 426 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 STX12Q86Y82 276 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 COMMD1Q8N668 190 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 INO80EQ8NBZ0 244 aaPredicted RBP4.83□□□□□ -1.64
SCFD1-212ENST00000554486 TMEM116Q8NCL8 245 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 OR10P1Q8NGE3 313 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 VN1R17PQ8TDU5 208 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 CACNG8Q8WXS5 425 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 PINX1Q96BK5 328 aaKnown RBP4.83□□□□□ -1.64
SCFD1-212ENST00000554486 USMG5Q96IX5 58 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 MFFQ9GZY8 342 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 SLA2Q9H6Q3 261 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 GNB4Q9HAV0 340 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 THYN1Q9P016 225 aa4.83□□□□□ -1.64
SCFD1-212ENST00000554486 TRRAPQ9Y4A5 3859 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 IGKV1D-37A0A075B6S9 117 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms