RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 PGLYRP1O75594 196 aaPredicted RBP2.15□□□□□ -2.07
SLIRP-202ENST00000553981 HPRT1P00492 218 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 IGKV1-5P01602 117 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 HSMCR30P0CW71 290 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 RNASE2P10153 161 aaKnown RBP2.15□□□□□ -2.07
SLIRP-202ENST00000553981 NQO2P16083 231 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 CRYBB3P26998 211 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 MAPK3P27361 379 aaPredicted RBP2.15□□□□□ -2.07
SLIRP-202ENST00000553981 EMP1P54849 157 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 CTF1Q16619 201 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 TIGITQ495A1 244 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 FAM222AQ5U5X8 452 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 TTC23Q5W5X9 447 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 ZFP1Q6P2D0 407 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 MORN3Q6PF18 240 aaPredicted RBP2.15□□□□□ -2.07
SLIRP-202ENST00000553981 C16orf54Q6UWD8 224 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 AMTNQ6UX39 209 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 TBC1D26Q86UD7 250 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 HOGA1Q86XE5 327 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 STHQ8IWL8 128 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 C6orf223Q8N319 242 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 DHRSXQ8N5I4 330 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 ZNF555Q8NEP9 628 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 STXBP6Q8NFX7 210 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 VSTM2AQ8TAG5 236 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 LGALS14Q8TCE9 139 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 UFD1Q92890 307 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 PINX1Q96BK5 328 aaKnown RBP2.15□□□□□ -2.07
SLIRP-202ENST00000553981 HSD17B10Q99714 261 aaKnown RBP2.15□□□□□ -2.07
SLIRP-202ENST00000553981 SRSF8Q9BRL6 282 aaKnown RBP2.15□□□□□ -2.07
SLIRP-202ENST00000553981 NDUFAF3Q9BU61 184 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 MND1Q9BWT6 205 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 HINT2Q9BX68 163 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 SLC5A7Q9GZV3 580 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 ATG5Q9H1Y0 275 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 TMEM14BQ9NUH8 114 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 ANAPC10Q9UM13 185 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 PRELID3BQ9Y3B1 194 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 OR51B2Q9Y5P1 312 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 FLG2Q5D862 2391 aaPredicted RBP2.14□□□□□ -2.07
SLIRP-202ENST00000553981 IGHV3OR16-12A0A075B7B8 117 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 TRAV2A0A0B4J234 112 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 TRAV1-2A0A0B4J238 106 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 EPM2AB3EWF7 344 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 FAM90A26D6RGX4 464 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 ANKRD65E5RJM6 399 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 CASQ2O14958 399 aaPredicted RBP2.14□□□□□ -2.07
SLIRP-202ENST00000553981 MRPS14O60783 128 aaKnown RBP2.14□□□□□ -2.07
SLIRP-202ENST00000553981 CIB2O75838 187 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 YIF1AO95070 293 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 HRASP01112 189 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 KRASP01116 189 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 IFNA10P01566 189 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 RLN1P04808 185 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 IGLC1P0CG04 106 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 DNAH10OSP0CZ25 163 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 SPP1P10451 314 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 HTN3P15516 51 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 CD36P16671 472 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 RAB3BP20337 219 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 P2RY1P47900 373 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 HOXA1P49639 335 aaPredicted RBP2.14□□□□□ -2.07
SLIRP-202ENST00000553981 MFAP4P55083 255 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 AQP4P55087 323 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 KRTAP10-4P60372 401 aaPredicted RBP2.14□□□□□ -2.07
SLIRP-202ENST00000553981 DLK1P80370 383 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 PRCDQ00LT1 54 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 MLLT11Q13015 90 aaPredicted RBP2.14□□□□□ -2.07
SLIRP-202ENST00000553981 CBX3Q13185 183 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 BSXQ3C1V8 233 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 KRTAP13-3Q3SY46 172 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 RNF212Q495C1 297 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 PSMG4Q5JS54 123 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 Q5VSD8 79 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 C22orf42Q6IC83 251 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 DHRS11Q6UWP2 260 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 TMEM182Q6ZP80 229 aaPredicted RBP2.14□□□□□ -2.07
SLIRP-202ENST00000553981 KRTAP5-2Q701N4 177 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 TMEM17Q86X19 198 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 C8orf59Q8N0T1 100 aaPredicted RBP2.14□□□□□ -2.07
SLIRP-202ENST00000553981 BEST4Q8NFU0 473 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 OR1L8Q8NGR8 309 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 OR1P1Q8NH06 330 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 IL22RA2Q969J5 263 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 LSM10Q969L4 123 aaKnown RBP2.14□□□□□ -2.07
SLIRP-202ENST00000553981 MRGPRFQ96AM1 343 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 RNF125Q96EQ8 232 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 GRAMD2BQ96HH9 432 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 MYCBPQ99417 103 aaPredicted RBP2.14□□□□□ -2.07
SLIRP-202ENST00000553981 MGLLQ99685 303 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 COMMD5Q9GZQ3 224 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 TXNL4BQ9NX01 149 aaKnown RBP2.14□□□□□ -2.07
SLIRP-202ENST00000553981 RABAC1Q9UI14 185 aa2.14□□□□□ -2.07
SLIRP-202ENST00000553981 MRPS7Q9Y2R9 242 aaKnown RBP2.14□□□□□ -2.07
SLIRP-202ENST00000553981 YTHDF2Q9Y5A9 579 aaKnown RBP2.14□□□□□ -2.07
SLIRP-202ENST00000553981 IGKV1D-37A0A075B6S9 117 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 TRAV18A0A075B6X5 111 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 TRDV1A0A1B0GX56 115 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 A8MTW9 85 aa2.13□□□□□ -2.07
SLIRP-202ENST00000553981 ZNF705GA8MUZ8 300 aaPredicted RBP2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms