RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 FAM27BQ5VT28 67 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 TMEM244Q5VVB8 128 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 C22orf39Q6P5X5 142 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 LYZL1Q6UWQ5 148 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 LCN15Q6UWW0 184 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 LINC00471Q8N535 108 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 OR5H6Q8NGV6 325 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 PFN4Q8NHR9 129 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 AQP3Q92482 292 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 MRPS24Q96EL2 167 aaKnown RBP1.29□□□□□ -2.2
SRP54-204ENST00000553923 TP53RKQ96S44 253 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 TMEM133Q9H2Q1 129 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 TPT1P8Q9HAU6 139 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 BAIAP2Q9UQB8 552 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 HHLA3Q9XRX5 114 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 ADAMTSL1Q8N6G6 1762 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 BAZ2AQ9UIF9 1905 aaKnown RBP1.28□□□□□ -2.2
SRP54-204ENST00000553923 MEIKINA0A087WXM9 373 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 TRAV13-1A0A0B4J241 112 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 IGHV1-18A0A0C4DH31 117 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 A0A0D9SG52 128 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 LOC107984640A0A0U1RRK4 108 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 C7orf71A4D174 169 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 FNDC10F2Z333 226 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 H3BMG7 143 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 J3QQQ9 107 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 RER1O15258 196 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 HIST1H2BKO60814 126 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 TIMM17BO60830 172 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 CPSF4O95639 269 aaKnown RBP1.28□□□□□ -2.2
SRP54-204ENST00000553923 C1QCP02747 245 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 IFNA4P05014 189 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 HIST1H2BJP06899 126 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 HTR1AP08908 422 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 MGST1P10620 155 aaKnown RBP1.28□□□□□ -2.2
SRP54-204ENST00000553923 HLA-EP13747 358 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 ZNF14P17017 642 aaPredicted RBP1.28□□□□□ -2.2
SRP54-204ENST00000553923 COL8A2P25067 703 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 RNASE4P34096 147 aaKnown RBP1.28□□□□□ -2.2
SRP54-204ENST00000553923 RPL35P42766 123 aaKnown RBP1.28□□□□□ -2.2
SRP54-204ENST00000553923 TMEM258P61165 79 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 ERHP84090 104 aaKnown RBP1.28□□□□□ -2.2
SRP54-204ENST00000553923 EIF4EBP1Q13541 118 aaPredicted RBP1.28□□□□□ -2.2
SRP54-204ENST00000553923 MOBPQ13875 183 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 DEFB115Q30KQ5 88 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 OR5D16Q8NGK9 328 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 LPAR5Q9H1C0 372 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 RNF122Q9H9V4 155 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 BCL2L10Q9HD36 194 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 CBLN4Q9NTU7 201 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 MARCOQ9UEW3 520 aaPredicted RBP1.28□□□□□ -2.2
SRP54-204ENST00000553923 HS3ST2Q9Y278 367 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 RFX7Q2KHR2 1363 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 OVOS2A0A0G2JMS6 1433 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 COL18A1P39060 1754 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 ARHGAP21Q5T5U3 1957 aa1.28□□□□□ -2.2
SRP54-204ENST00000553923 SLIT3O75094 1523 aa1.27□□□□□ -2.21
SRP54-204ENST00000553923 CAMSAP2Q08AD1 1489 aa1.27□□□□□ -2.21
SRP54-204ENST00000553923 IBTKQ9P2D0 1353 aaPredicted RBP1.27□□□□□ -2.21
SRP54-204ENST00000553923 IGHV1-58A0A0C4DH39 117 aa1.27□□□□□ -2.21
SRP54-204ENST00000553923 TRBV10-2A0A0K0K1G8 114 aa1.27□□□□□ -2.21
SRP54-204ENST00000553923 ARRDC5A6NEK1 342 aa1.27□□□□□ -2.21
SRP54-204ENST00000553923 HMSDA8MTL9 139 aa1.27□□□□□ -2.21
SRP54-204ENST00000553923 LINC00587B1AMM8 73 aa1.27□□□□□ -2.21
SRP54-204ENST00000553923 G3V3Q6 166 aa1.27□□□□□ -2.21
SRP54-204ENST00000553923 C3orf84H3BNL1 204 aa1.27□□□□□ -2.21
SRP54-204ENST00000553923 SDCBPO00560 298 aaPredicted RBP1.27□□□□□ -2.21
SRP54-204ENST00000553923 GNG7O60262 68 aa1.27□□□□□ -2.21
SRP54-204ENST00000553923 TPST1O60507 370 aa1.27□□□□□ -2.21
SRP54-204ENST00000553923 CTSGP08311 255 aa1.27□□□□□ -2.21
SRP54-204ENST00000553923 SCTP09683 121 aa1.27□□□□□ -2.21
SRP54-204ENST00000553923 HRES1P13985 223 aa1.27□□□□□ -2.21
SRP54-204ENST00000553923 S100A1P23297 94 aa1.27□□□□□ -2.21
SRP54-204ENST00000553923 FXYD2P54710 66 aa1.27□□□□□ -2.21
SRP54-204ENST00000553923 DNAJB13P59910 316 aa1.27□□□□□ -2.21
SRP54-204ENST00000553923 NCS1P62166 190 aa1.27□□□□□ -2.21
SRP54-204ENST00000553923 PSG9Q00887 426 aa1.27□□□□□ -2.21
SRP54-204ENST00000553923 NDUFA5Q16718 116 aa1.27□□□□□ -2.21
SRP54-204ENST00000553923 PABPC1L2AQ5JQF8 200 aa1.27□□□□□ -2.21
SRP54-204ENST00000553923 CMTM2Q8TAZ6 248 aa1.27□□□□□ -2.21
SRP54-204ENST00000553923 PRELID3AQ96N28 172 aa1.27□□□□□ -2.21
SRP54-204ENST00000553923 CGREF1Q99674 301 aa1.27□□□□□ -2.21
SRP54-204ENST00000553923 BANF2Q9H503 90 aa1.27□□□□□ -2.21
SRP54-204ENST00000553923 NIT2Q9NQR4 276 aa1.27□□□□□ -2.21
SRP54-204ENST00000553923 TNFSF18Q9UNG2 199 aa1.27□□□□□ -2.21
SRP54-204ENST00000553923 FAM215AQ9Y5M1 114 aa1.27□□□□□ -2.21
SRP54-204ENST00000553923 NAV1Q8NEY1 1877 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 CEP164Q9UPV0 1460 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 CD109Q6YHK3 1445 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 SPATA31E1Q6ZUB1 1445 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 IGHV3-64A0A075B6Q5 118 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 TRAV1-1A0A0B4J248 108 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 MEIS3P1A6NDR6 274 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 C19orf84I3L1E1 186 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 K7EP13 123 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 SMIM24O75264 130 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 PGLYRP1O75594 196 aaPredicted RBP1.26□□□□□ -2.21
SRP54-204ENST00000553923 APOC1P02654 83 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 PMP2P02689 132 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 SHBGP04278 402 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms