RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 ZNF137PP52743 207 aa11.68□□□□□ -0.54
ACTN1-211ENST00000553882 KRTDAPP60985 99 aa11.68□□□□□ -0.54
ACTN1-211ENST00000553882 PPP1R14DQ9NXH3 145 aa11.68□□□□□ -0.54
ACTN1-211ENST00000553882 BRS3P32247 399 aa11.68□□□□□ -0.54
ACTN1-211ENST00000553882 AMTP48728 403 aa11.68□□□□□ -0.54
ACTN1-211ENST00000553882 SLAQ13239 276 aa11.68□□□□□ -0.54
ACTN1-211ENST00000553882 THAP8Q8NA92 274 aa11.68□□□□□ -0.54
ACTN1-211ENST00000553882 FBXL7Q9UJT9 491 aa11.68□□□□□ -0.54
ACTN1-211ENST00000553882 TBL2Q9Y4P3 447 aaKnown RBP11.68□□□□□ -0.54
ACTN1-211ENST00000553882 IGF2RP11717 2491 aa11.68□□□□□ -0.54
ACTN1-211ENST00000553882 ARHGAP32A7KAX9 2087 aa11.67□□□□□ -0.54
ACTN1-211ENST00000553882 IGHV2-26A0A0B4J1V2 119 aa11.67□□□□□ -0.54
ACTN1-211ENST00000553882 COX7A1P24310 79 aa11.67□□□□□ -0.54
ACTN1-211ENST00000553882 C8orf31Q8N9H6 132 aa11.67□□□□□ -0.54
ACTN1-211ENST00000553882 KAAG1Q9UBP8 84 aa11.67□□□□□ -0.54
ACTN1-211ENST00000553882 ATRXP46100 2492 aa11.67□□□□□ -0.54
ACTN1-211ENST00000553882 SLC25A5P05141 298 aaKnown RBP11.67□□□□□ -0.54
ACTN1-211ENST00000553882 GPX1P07203 203 aa11.67□□□□□ -0.54
ACTN1-211ENST00000553882 RPL27AP46776 148 aaKnown RBP11.67□□□□□ -0.54
ACTN1-211ENST00000553882 ZNF705AQ6ZN79 300 aaPredicted RBP11.67□□□□□ -0.54
ACTN1-211ENST00000553882 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.66□□□□□ -0.54
ACTN1-211ENST00000553882 CORTO00230 105 aa11.66□□□□□ -0.54
ACTN1-211ENST00000553882 LGALS7P47929 136 aa11.66□□□□□ -0.54
ACTN1-211ENST00000553882 LBHQ53QV2 105 aaPredicted RBP11.66□□□□□ -0.54
ACTN1-211ENST00000553882 ZNF841Q6ZN19 808 aa11.66□□□□□ -0.54
ACTN1-211ENST00000553882 FAM19A2Q8N3H0 131 aa11.66□□□□□ -0.54
ACTN1-211ENST00000553882 NUDT10Q8NFP7 164 aa11.66□□□□□ -0.54
ACTN1-211ENST00000553882 NUDT11Q96G61 164 aa11.66□□□□□ -0.54
ACTN1-211ENST00000553882 TMEM68Q96MH6 324 aa11.66□□□□□ -0.54
ACTN1-211ENST00000553882 NGBQ9NPG2 151 aa11.66□□□□□ -0.54
ACTN1-211ENST00000553882 ZNF331Q9NQX6 463 aaPredicted RBP11.66□□□□□ -0.54
ACTN1-211ENST00000553882 INSIG2Q9Y5U4 225 aa11.66□□□□□ -0.54
ACTN1-211ENST00000553882 IZUMO1RA6ND01 250 aa11.66□□□□□ -0.54
ACTN1-211ENST00000553882 PGPA6NDG6 321 aa11.66□□□□□ -0.54
ACTN1-211ENST00000553882 HLA-DQA1P01909 254 aa11.66□□□□□ -0.54
ACTN1-211ENST00000553882 APCSP02743 223 aa11.66□□□□□ -0.54
ACTN1-211ENST00000553882 FAM87AP0C7U9 286 aa11.66□□□□□ -0.54
ACTN1-211ENST00000553882 UBE2G1P62253 170 aa11.66□□□□□ -0.54
ACTN1-211ENST00000553882 LINC01560Q8TB33 94 aa11.66□□□□□ -0.54
ACTN1-211ENST00000553882 A0A1W2PS18 150 aa11.65□□□□□ -0.54
ACTN1-211ENST00000553882 NUP35Q8NFH5 326 aa11.65□□□□□ -0.54
ACTN1-211ENST00000553882 PERPQ96FX8 193 aa11.65□□□□□ -0.54
ACTN1-211ENST00000553882 SSBP4Q9BWG4 385 aaPredicted RBP11.65□□□□□ -0.54
ACTN1-211ENST00000553882 ZNF835Q9Y2P0 537 aa11.65□□□□□ -0.54
ACTN1-211ENST00000553882 COMPP49747 757 aaPredicted RBP11.65□□□□□ -0.54
ACTN1-211ENST00000553882 CAMPP49913 170 aa11.65□□□□□ -0.54
ACTN1-211ENST00000553882 TBR1Q16650 682 aa11.65□□□□□ -0.54
ACTN1-211ENST00000553882 TEX43Q6ZNM6 134 aa11.65□□□□□ -0.54
ACTN1-211ENST00000553882 SPACA3Q8IXA5 215 aa11.65□□□□□ -0.54
ACTN1-211ENST00000553882 KCNS1Q96KK3 526 aa11.65□□□□□ -0.54
ACTN1-211ENST00000553882 FBXL15Q9H469 300 aa11.65□□□□□ -0.54
ACTN1-211ENST00000553882 RALYQ9UKM9 306 aaKnown RBP11.65□□□□□ -0.54
ACTN1-211ENST00000553882 SIGLEC9Q9Y336 463 aa11.65□□□□□ -0.54
ACTN1-211ENST00000553882 IGHV1-3A0A0C4DH29 117 aa11.64□□□□□ -0.55
ACTN1-211ENST00000553882 HIGD1CA8MV81 97 aa11.64□□□□□ -0.55
ACTN1-211ENST00000553882 PRB4P10163 310 aaPredicted RBP11.64□□□□□ -0.55
ACTN1-211ENST00000553882 NTF3P20783 257 aa11.64□□□□□ -0.55
ACTN1-211ENST00000553882 APOBEC3AP31941 199 aaPredicted RBP11.64□□□□□ -0.55
ACTN1-211ENST00000553882 OR10J3Q5JRS4 329 aa11.64□□□□□ -0.55
ACTN1-211ENST00000553882 IGFBPL1Q8WX77 278 aa11.64□□□□□ -0.55
ACTN1-211ENST00000553882 C22orf15Q8WYQ4 148 aa11.64□□□□□ -0.55
ACTN1-211ENST00000553882 VAMP8Q9BV40 100 aa11.64□□□□□ -0.55
ACTN1-211ENST00000553882 NRN1Q9NPD7 142 aa11.64□□□□□ -0.55
ACTN1-211ENST00000553882 ZNF586Q9NXT0 402 aa11.64□□□□□ -0.55
ACTN1-211ENST00000553882 EPDR1Q9UM22 224 aa11.64□□□□□ -0.55
ACTN1-211ENST00000553882 TOX4O94842 621 aa11.64□□□□□ -0.55
ACTN1-211ENST00000553882 IGLV1-47P01700 117 aa11.64□□□□□ -0.55
ACTN1-211ENST00000553882 NBEAP1P0C6P0 100 aa11.64□□□□□ -0.55
ACTN1-211ENST00000553882 GRNP28799 593 aaKnown RBP11.64□□□□□ -0.55
ACTN1-211ENST00000553882 GPR6P46095 362 aaPredicted RBP11.64□□□□□ -0.55
ACTN1-211ENST00000553882 FOXC1Q12948 553 aa11.64□□□□□ -0.55
ACTN1-211ENST00000553882 GDF5OSQ5U4N7 250 aa11.64□□□□□ -0.55
ACTN1-211ENST00000553882 ETFRF1Q6IPR1 90 aa11.64□□□□□ -0.55
ACTN1-211ENST00000553882 TEX45Q8NA69 505 aa11.64□□□□□ -0.55
ACTN1-211ENST00000553882 NEU1Q99519 415 aa11.64□□□□□ -0.55
ACTN1-211ENST00000553882 MED13LQ71F56 2210 aa11.64□□□□□ -0.55
ACTN1-211ENST00000553882 HRNRQ86YZ3 2850 aaPredicted RBP11.64□□□□□ -0.55
ACTN1-211ENST00000553882 LY6HO94772 140 aa11.63□□□□□ -0.55
ACTN1-211ENST00000553882 CRYGCP07315 174 aa11.63□□□□□ -0.55
ACTN1-211ENST00000553882 CD3EP07766 207 aa11.63□□□□□ -0.55
ACTN1-211ENST00000553882 MYCNOSP40205 109 aa11.63□□□□□ -0.55
ACTN1-211ENST00000553882 TMEM183BQ1AE95 376 aa11.63□□□□□ -0.55
ACTN1-211ENST00000553882 PPP1R27Q86WC6 154 aa11.63□□□□□ -0.55
ACTN1-211ENST00000553882 MBD6Q96DN6 1003 aa11.63□□□□□ -0.55
ACTN1-211ENST00000553882 BUB1B-PAK6H3BSN5 160 aa11.63□□□□□ -0.55
ACTN1-211ENST00000553882 HYPMO75409 117 aa11.63□□□□□ -0.55
ACTN1-211ENST00000553882 TMEM116Q8NCL8 245 aa11.63□□□□□ -0.55
ACTN1-211ENST00000553882 FAM90A27PA6NNH2 459 aa11.62□□□□□ -0.55
ACTN1-211ENST00000553882 VWC2LB2RUY7 222 aa11.62□□□□□ -0.55
ACTN1-211ENST00000553882 DIRC3C9JPN6 131 aa11.62□□□□□ -0.55
ACTN1-211ENST00000553882 M0R143 59 aa11.62□□□□□ -0.55
ACTN1-211ENST00000553882 ZNF324O75467 553 aaPredicted RBP11.62□□□□□ -0.55
ACTN1-211ENST00000553882 PRRX1P54821 245 aa11.62□□□□□ -0.55
ACTN1-211ENST00000553882 SSTP61278 116 aa11.62□□□□□ -0.55
ACTN1-211ENST00000553882 PLGLAQ15195 96 aa11.62□□□□□ -0.55
ACTN1-211ENST00000553882 COX19Q49B96 90 aa11.62□□□□□ -0.55
ACTN1-211ENST00000553882 LINC00322Q6ZN03 302 aaPredicted RBP11.62□□□□□ -0.55
ACTN1-211ENST00000553882 C1orf122Q6ZSJ8 110 aa11.62□□□□□ -0.55
ACTN1-211ENST00000553882 RPEQ96AT9 228 aa11.62□□□□□ -0.55
ACTN1-211ENST00000553882 TRGV9Q99603 122 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms