RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 OR4C46A6NHA9 309 aa6.3□□□□□ -1.4
PSEN1-209ENST00000553855 ZFP92A6NM28 416 aa6.3□□□□□ -1.4
PSEN1-209ENST00000553855 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.3□□□□□ -1.4
PSEN1-209ENST00000553855 L7N2F9 121 aa6.3□□□□□ -1.4
PSEN1-209ENST00000553855 ZNF207O43670 478 aaKnown RBP6.3□□□□□ -1.4
PSEN1-209ENST00000553855 PITX3O75364 302 aa6.3□□□□□ -1.4
PSEN1-209ENST00000553855 SCAF4O95104 1147 aaKnown RBP6.3□□□□□ -1.4
PSEN1-209ENST00000553855 NPPCP23582 126 aa6.3□□□□□ -1.4
PSEN1-209ENST00000553855 OR10J1P30954 320 aa6.3□□□□□ -1.4
PSEN1-209ENST00000553855 S100A7P31151 101 aa6.3□□□□□ -1.4
PSEN1-209ENST00000553855 GPX4P36969 197 aaPredicted RBP6.3□□□□□ -1.4
PSEN1-209ENST00000553855 EIF2B2P49770 351 aaKnown RBP6.3□□□□□ -1.4
PSEN1-209ENST00000553855 CMC4P56277 68 aaPredicted RBP6.3□□□□□ -1.4
PSEN1-209ENST00000553855 VAMP2P63027 116 aa6.3□□□□□ -1.4
PSEN1-209ENST00000553855 SPANXN5Q5MJ07 72 aa6.3□□□□□ -1.4
PSEN1-209ENST00000553855 C12orf45Q8N5I9 185 aaPredicted RBP6.3□□□□□ -1.4
PSEN1-209ENST00000553855 TMEM116Q8NCL8 245 aa6.3□□□□□ -1.4
PSEN1-209ENST00000553855 METTL26Q96S19 204 aa6.3□□□□□ -1.4
PSEN1-209ENST00000553855 NEURL2Q9BR09 285 aa6.3□□□□□ -1.4
PSEN1-209ENST00000553855 MAGT1Q9H0U3 335 aa6.3□□□□□ -1.4
PSEN1-209ENST00000553855 SLC25A32Q9H2D1 315 aa6.3□□□□□ -1.4
PSEN1-209ENST00000553855 SEPSECSQ9HD40 501 aaKnown RBP6.3□□□□□ -1.4
PSEN1-209ENST00000553855 LSM4Q9Y4Z0 139 aaKnown RBP6.3□□□□□ -1.4
PSEN1-209ENST00000553855 IGHV3OR16-8A0A075B7F1 116 aa6.29□□□□□ -1.4
PSEN1-209ENST00000553855 IGHV7-4-1A0A0J9YVY3 117 aa6.29□□□□□ -1.4
PSEN1-209ENST00000553855 KRTAP9-6A0A140TA67 174 aa6.29□□□□□ -1.4
PSEN1-209ENST00000553855 DNASE2O00115 360 aaPredicted RBP6.29□□□□□ -1.4
PSEN1-209ENST00000553855 PRAF2O60831 178 aa6.29□□□□□ -1.4
PSEN1-209ENST00000553855 RD3LP0DJH9 198 aa6.29□□□□□ -1.4
PSEN1-209ENST00000553855 C8orf88P0DMB2 117 aa6.29□□□□□ -1.4
PSEN1-209ENST00000553855 PVALBP20472 110 aaPredicted RBP6.29□□□□□ -1.4
PSEN1-209ENST00000553855 NUP62P37198 522 aaPredicted RBP6.29□□□□□ -1.4
PSEN1-209ENST00000553855 TIGITQ495A1 244 aa6.29□□□□□ -1.4
PSEN1-209ENST00000553855 PRSS54Q6PEW0 395 aa6.29□□□□□ -1.4
PSEN1-209ENST00000553855 TOMM20LQ6UXN7 152 aa6.29□□□□□ -1.4
PSEN1-209ENST00000553855 GSG1LQ6UXU4 331 aa6.29□□□□□ -1.4
PSEN1-209ENST00000553855 TMEM61Q8N0U2 210 aa6.29□□□□□ -1.4
PSEN1-209ENST00000553855 NPIPB3Q92617 1050 aa6.29□□□□□ -1.4
PSEN1-209ENST00000553855 RAB40CQ96S21 281 aa6.29□□□□□ -1.4
PSEN1-209ENST00000553855 SPAG8Q99932 426 aaPredicted RBP6.29□□□□□ -1.4
PSEN1-209ENST00000553855 RHPN1-AS1Q9BWJ2 59 aa6.29□□□□□ -1.4
PSEN1-209ENST00000553855 FNDC4Q9H6D8 234 aaPredicted RBP6.29□□□□□ -1.4
PSEN1-209ENST00000553855 PSENENQ9NZ42 101 aa6.29□□□□□ -1.4
PSEN1-209ENST00000553855 MLXQ9UH92 298 aa6.29□□□□□ -1.4
PSEN1-209ENST00000553855 SMPXQ9UHP9 88 aa6.29□□□□□ -1.4
PSEN1-209ENST00000553855 SMCO3A2RU48 225 aa6.28□□□□□ -1.4
PSEN1-209ENST00000553855 IZUMO1RA6ND01 250 aa6.28□□□□□ -1.4
PSEN1-209ENST00000553855 OR11H12B2RN74 326 aa6.28□□□□□ -1.4
PSEN1-209ENST00000553855 INMT-MINDY4F8WBC2 141 aa6.28□□□□□ -1.4
PSEN1-209ENST00000553855 TSPAN4O14817 238 aa6.28□□□□□ -1.4
PSEN1-209ENST00000553855 SSSCA1O60232 199 aa6.28□□□□□ -1.4
PSEN1-209ENST00000553855 IL5P05113 134 aa6.28□□□□□ -1.4
PSEN1-209ENST00000553855 IGHV4-30-4P0DP06 118 aa6.28□□□□□ -1.4
PSEN1-209ENST00000553855 BCAP31P51572 246 aa6.28□□□□□ -1.4
PSEN1-209ENST00000553855 YPEL3P61236 119 aaPredicted RBP6.28□□□□□ -1.4
PSEN1-209ENST00000553855 POLR2GP62487 172 aaKnown RBP eCLIP6.28□□□□□ -1.4
PSEN1-209ENST00000553855 AKR1C1Q04828 323 aa6.28□□□□□ -1.4
PSEN1-209ENST00000553855 ADAMTSL5Q6ZMM2 481 aa6.28□□□□□ -1.4
PSEN1-209ENST00000553855 ZBTB8BQ8NAP8 495 aaPredicted RBP6.28□□□□□ -1.4
PSEN1-209ENST00000553855 OR10C1Q96KK4 312 aa6.28□□□□□ -1.4
PSEN1-209ENST00000553855 ASCL2Q99929 193 aa6.28□□□□□ -1.4
PSEN1-209ENST00000553855 SEC22CQ9BRL7 303 aa6.28□□□□□ -1.4
PSEN1-209ENST00000553855 TBC1D24Q9ULP9 559 aa6.28□□□□□ -1.4
PSEN1-209ENST00000553855 IGKV3-7A0A075B6H7 116 aa6.27□□□□□ -1.41
PSEN1-209ENST00000553855 IGHV3-49A0A0A0MS15 119 aa6.27□□□□□ -1.41
PSEN1-209ENST00000553855 H3BP45 60 aa6.27□□□□□ -1.41
PSEN1-209ENST00000553855 CCSO14618 274 aa6.27□□□□□ -1.41
PSEN1-209ENST00000553855 CHEK1O14757 476 aa6.27□□□□□ -1.41
PSEN1-209ENST00000553855 TOMM40O96008 361 aa6.27□□□□□ -1.41
PSEN1-209ENST00000553855 CFDP00746 253 aaPredicted RBP6.27□□□□□ -1.41
PSEN1-209ENST00000553855 RLN2P04090 185 aa6.27□□□□□ -1.41
PSEN1-209ENST00000553855 IL4P05112 153 aa6.27□□□□□ -1.41
PSEN1-209ENST00000553855 HNRNPCP07910 306 aaKnown RBP eCLIP6.27□□□□□ -1.41
PSEN1-209ENST00000553855 FRMD6-AS1P0C7T7 363 aa6.27□□□□□ -1.41
PSEN1-209ENST00000553855 IGLC1P0CG04 106 aa6.27□□□□□ -1.41
PSEN1-209ENST00000553855 EDN2P20800 178 aa6.27□□□□□ -1.41
PSEN1-209ENST00000553855 TAS2R30P59541 319 aa6.27□□□□□ -1.41
PSEN1-209ENST00000553855 OR8G2PQ6IF36 304 aa6.27□□□□□ -1.41
PSEN1-209ENST00000553855 TCF24Q7RTU0 167 aa6.27□□□□□ -1.41
PSEN1-209ENST00000553855 S100A7AQ86SG5 101 aa6.27□□□□□ -1.41
PSEN1-209ENST00000553855 OR10P1Q8NGE3 313 aa6.27□□□□□ -1.41
PSEN1-209ENST00000553855 OR51G1Q8NGK1 321 aa6.27□□□□□ -1.41
PSEN1-209ENST00000553855 OR4D5Q8NGN0 318 aa6.27□□□□□ -1.41
PSEN1-209ENST00000553855 PPP1R14BQ96C90 147 aa6.27□□□□□ -1.41
PSEN1-209ENST00000553855 C2orf50Q96LR7 162 aa6.27□□□□□ -1.41
PSEN1-209ENST00000553855 NEU1Q99519 415 aa6.27□□□□□ -1.41
PSEN1-209ENST00000553855 KRTAP4-12Q9BQ66 201 aa6.27□□□□□ -1.41
PSEN1-209ENST00000553855 PBDC1Q9BVG4 233 aa6.27□□□□□ -1.41
PSEN1-209ENST00000553855 MGAT4CQ9UBM8 478 aa6.27□□□□□ -1.41
PSEN1-209ENST00000553855 RABAC1Q9UI14 185 aa6.27□□□□□ -1.41
PSEN1-209ENST00000553855 LSM5Q9Y4Y9 91 aaKnown RBP6.27□□□□□ -1.41
PSEN1-209ENST00000553855 SELENOKQ9Y6D0 94 aa6.27□□□□□ -1.41
PSEN1-209ENST00000553855 KMT2CQ8NEZ4 4911 aaKnown RBP6.27□□□□□ -1.41
PSEN1-209ENST00000553855 RYR3Q15413 4870 aa6.26□□□□□ -1.41
PSEN1-209ENST00000553855 IGHV3OR16-13A0A075B7E8 117 aa6.26□□□□□ -1.41
PSEN1-209ENST00000553855 IGHV3-74A0A0B4J1X5 117 aa6.26□□□□□ -1.41
PSEN1-209ENST00000553855 HELTA6NFD8 242 aa6.26□□□□□ -1.41
PSEN1-209ENST00000553855 SNRPGP15A8MWD9 76 aa6.26□□□□□ -1.41
PSEN1-209ENST00000553855 A8MZ25 164 aa6.26□□□□□ -1.41
PSEN1-209ENST00000553855 SSNA1O43805 119 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms