RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 OR4B1Q8NGF8 309 aa12.57□□□□□ -0.4
SYNE2-211ENST00000553801 TERB2Q8NHR7 220 aa12.57□□□□□ -0.4
SYNE2-211ENST00000553801 ACY3Q96HD9 319 aa12.57□□□□□ -0.4
SYNE2-211ENST00000553801 KLK11Q9UBX7 282 aa12.57□□□□□ -0.4
SYNE2-211ENST00000553801 CACFD1Q9UGQ2 172 aa12.57□□□□□ -0.4
SYNE2-211ENST00000553801 LOC102723971A0A1B0GUV8 181 aa12.56□□□□□ -0.4
SYNE2-211ENST00000553801 CDS2O95674 445 aa12.56□□□□□ -0.4
SYNE2-211ENST00000553801 CD3DP04234 171 aa12.56□□□□□ -0.4
SYNE2-211ENST00000553801 PSG1P11464 419 aa12.56□□□□□ -0.4
SYNE2-211ENST00000553801 ELK1P19419 428 aa12.56□□□□□ -0.4
SYNE2-211ENST00000553801 PSMB3P49720 205 aa12.56□□□□□ -0.4
SYNE2-211ENST00000553801 PSG9Q00887 426 aa12.56□□□□□ -0.4
SYNE2-211ENST00000553801 ZNF709Q8N972 641 aa12.56□□□□□ -0.4
SYNE2-211ENST00000553801 OR51G1Q8NGK1 321 aa12.56□□□□□ -0.4
SYNE2-211ENST00000553801 COQ8AQ8NI60 647 aa12.56□□□□□ -0.4
SYNE2-211ENST00000553801 YIPF6Q96EC8 236 aa12.56□□□□□ -0.4
SYNE2-211ENST00000553801 ATG101Q9BSB4 218 aa12.56□□□□□ -0.4
SYNE2-211ENST00000553801 TMEM222Q9H0R3 208 aa12.56□□□□□ -0.4
SYNE2-211ENST00000553801 YTHDF2Q9Y5A9 579 aaKnown RBP12.56□□□□□ -0.4
SYNE2-211ENST00000553801 RRN3P1Q2M238 152 aa12.55□□□□□ -0.4
SYNE2-211ENST00000553801 OR8G2PQ6IF36 304 aa12.55□□□□□ -0.4
SYNE2-211ENST00000553801 EBLN2Q6P2I7 272 aa12.55□□□□□ -0.4
SYNE2-211ENST00000553801 GSG1LQ6UXU4 331 aa12.55□□□□□ -0.4
SYNE2-211ENST00000553801 MAPKAPK5-AS1Q8N8E1 139 aa12.55□□□□□ -0.4
SYNE2-211ENST00000553801 OR13C8Q8NGS7 320 aa12.55□□□□□ -0.4
SYNE2-211ENST00000553801 RBPMSQ93062 196 aaKnown RBP12.55□□□□□ -0.4
SYNE2-211ENST00000553801 RNF125Q96EQ8 232 aa12.55□□□□□ -0.4
SYNE2-211ENST00000553801 ABHD1Q96SE0 405 aa12.55□□□□□ -0.4
SYNE2-211ENST00000553801 VCX3AQ9NNX9 186 aa12.55□□□□□ -0.4
SYNE2-211ENST00000553801 CACNG5Q9UF02 275 aa12.55□□□□□ -0.4
SYNE2-211ENST00000553801 HPGDSO60760 199 aa12.54□□□□□ -0.4
SYNE2-211ENST00000553801 NXPH3O95157 252 aa12.54□□□□□ -0.4
SYNE2-211ENST00000553801 TNFAIP8O95379 198 aa12.54□□□□□ -0.4
SYNE2-211ENST00000553801 RORCP51449 518 aa12.54□□□□□ -0.4
SYNE2-211ENST00000553801 DEFB1P60022 68 aa12.54□□□□□ -0.4
SYNE2-211ENST00000553801 TNP2Q05952 138 aa12.54□□□□□ -0.4
SYNE2-211ENST00000553801 ZNF79Q15937 498 aa12.54□□□□□ -0.4
SYNE2-211ENST00000553801 SCGB2B2Q4G0G5 96 aa12.54□□□□□ -0.4
SYNE2-211ENST00000553801 RNASE12Q5GAN4 147 aaKnown RBP12.54□□□□□ -0.4
SYNE2-211ENST00000553801 PBDC1Q9BVG4 233 aa12.54□□□□□ -0.4
SYNE2-211ENST00000553801 WDR12Q9GZL7 423 aaKnown RBP12.54□□□□□ -0.4
SYNE2-211ENST00000553801 MAGT1Q9H0U3 335 aa12.54□□□□□ -0.4
SYNE2-211ENST00000553801 SLC35B3Q9H1N7 401 aa12.54□□□□□ -0.4
SYNE2-211ENST00000553801 TEX13DA0A0J9YY54 714 aaPredicted RBP12.53□□□□□ -0.4
SYNE2-211ENST00000553801 FAM25AB3EWG3 89 aa12.53□□□□□ -0.4
SYNE2-211ENST00000553801 FAM25CB3EWG5 89 aa12.53□□□□□ -0.4
SYNE2-211ENST00000553801 FAM25GB3EWG6 89 aa12.53□□□□□ -0.4
SYNE2-211ENST00000553801 ATP6V1G2O95670 118 aa12.53□□□□□ -0.4
SYNE2-211ENST00000553801 OR5AC1P0C628 307 aa12.53□□□□□ -0.4
SYNE2-211ENST00000553801 PAX9P55771 341 aa12.53□□□□□ -0.4
SYNE2-211ENST00000553801 C1orf194Q5T5A4 169 aa12.53□□□□□ -0.4
SYNE2-211ENST00000553801 SAMD13Q5VXD3 122 aa12.53□□□□□ -0.4
SYNE2-211ENST00000553801 C1orf158Q8N1D5 194 aa12.53□□□□□ -0.4
SYNE2-211ENST00000553801 MARCH1Q8TCQ1 289 aa12.53□□□□□ -0.4
SYNE2-211ENST00000553801 GLYATL2Q8WU03 294 aa12.53□□□□□ -0.4
SYNE2-211ENST00000553801 TMEM170AQ8WVE7 144 aa12.53□□□□□ -0.4
SYNE2-211ENST00000553801 GPR146Q96CH1 333 aa12.53□□□□□ -0.4
SYNE2-211ENST00000553801 MTFP1Q9UDX5 166 aa12.53□□□□□ -0.4
SYNE2-211ENST00000553801 C14orf166Q9Y224 244 aaKnown RBP12.53□□□□□ -0.4
SYNE2-211ENST00000553801 ALDH3B2P48448 385 aa12.52□□□□□ -0.41
SYNE2-211ENST00000553801 SUPT4H1P63272 117 aaKnown RBP12.52□□□□□ -0.41
SYNE2-211ENST00000553801 KLF9Q13886 244 aaPredicted RBP12.52□□□□□ -0.41
SYNE2-211ENST00000553801 NMSQ5H8A3 153 aa12.52□□□□□ -0.41
SYNE2-211ENST00000553801 FAM78BQ5VT40 261 aa12.52□□□□□ -0.41
SYNE2-211ENST00000553801 MZT2AQ6P582 158 aa12.52□□□□□ -0.41
SYNE2-211ENST00000553801 SELENOHQ8IZQ5 122 aaKnown RBP12.52□□□□□ -0.41
SYNE2-211ENST00000553801 OR52I2Q8NH67 350 aa12.52□□□□□ -0.41
SYNE2-211ENST00000553801 TMEM208Q9BTX3 173 aa12.52□□□□□ -0.41
SYNE2-211ENST00000553801 U3KQ87 197 aa12.52□□□□□ -0.41
SYNE2-211ENST00000553801 ZFP92A6NM28 416 aa12.51□□□□□ -0.41
SYNE2-211ENST00000553801 ISLRO14498 428 aa12.51□□□□□ -0.41
SYNE2-211ENST00000553801 SOCS3O14543 225 aa12.51□□□□□ -0.41
SYNE2-211ENST00000553801 RAB3DO95716 219 aa12.51□□□□□ -0.41
SYNE2-211ENST00000553801 FABP1P07148 127 aa12.51□□□□□ -0.41
SYNE2-211ENST00000553801 TAS2R19P59542 299 aa12.51□□□□□ -0.41
SYNE2-211ENST00000553801 C6orf223Q8N319 242 aa12.51□□□□□ -0.41
SYNE2-211ENST00000553801 TMEM229BQ8NBD8 167 aa12.51□□□□□ -0.41
SYNE2-211ENST00000553801 LHFPL5Q8TAF8 219 aa12.51□□□□□ -0.41
SYNE2-211ENST00000553801 C15orf40Q8WUR7 153 aa12.51□□□□□ -0.41
SYNE2-211ENST00000553801 NAA60Q9H7X0 242 aa12.51□□□□□ -0.41
SYNE2-211ENST00000553801 RPRMQ9NS64 109 aa12.51□□□□□ -0.41
SYNE2-211ENST00000553801 A0A0J9YX75 114 aa12.5□□□□□ -0.41
SYNE2-211ENST00000553801 NBDYA0A0U1RRE5 68 aa12.5□□□□□ -0.41
SYNE2-211ENST00000553801 TMEM268Q5VZI3 342 aa12.5□□□□□ -0.41
SYNE2-211ENST00000553801 OR4D10Q8NGI6 311 aa12.5□□□□□ -0.41
SYNE2-211ENST00000553801 PPP1R14BQ96C90 147 aa12.5□□□□□ -0.41
SYNE2-211ENST00000553801 LYRM9A8MSI8 78 aa12.49□□□□□ -0.41
SYNE2-211ENST00000553801 SULT1A3P0DMM9 295 aa12.49□□□□□ -0.41
SYNE2-211ENST00000553801 SULT1A4P0DMN0 295 aa12.49□□□□□ -0.41
SYNE2-211ENST00000553801 NCS1P62166 190 aa12.49□□□□□ -0.41
SYNE2-211ENST00000553801 MEF2DQ14814 521 aa12.49□□□□□ -0.41
SYNE2-211ENST00000553801 STEAP1BQ6NZ63 245 aa12.49□□□□□ -0.41
SYNE2-211ENST00000553801 OR8I2Q8N0Y5 310 aa12.49□□□□□ -0.41
SYNE2-211ENST00000553801 IGF2BP2-AS1Q96M15 143 aa12.49□□□□□ -0.41
SYNE2-211ENST00000553801 RTBDNQ9BSG5 229 aaPredicted RBP12.49□□□□□ -0.41
SYNE2-211ENST00000553801 LRP1BQ9NZR2 4599 aa12.49□□□□□ -0.41
SYNE2-211ENST00000553801 A0A087WXM4 84 aa12.48□□□□□ -0.41
SYNE2-211ENST00000553801 SNRPGP15A8MWD9 76 aa12.48□□□□□ -0.41
SYNE2-211ENST00000553801 F6UB75 175 aa12.48□□□□□ -0.41
SYNE2-211ENST00000553801 GABARAPH6UMI1 98 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms