RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 WFDC1Q9HC57 220 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 CYTL1Q9NRR1 136 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 KLK9Q9UKQ9 250 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 RNF24Q9Y225 148 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 IGLV11-55A0A075B6I3 123 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 TRBV9A0A0B4J1U6 114 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 A0A1B0GW64 132 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 PSMB11A5LHX3 300 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 DNAJC9-AS1A6NH13 148 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 ZFP92A6NM28 416 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 LINC01548A6NM66 108 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 INAFM1C9JVW0 142 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 PRSS46E5RG02 174 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 GNG7O60262 68 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 CLN5O75503 358 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 TRGV3P03979 118 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 APELAP0DMC3 54 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 SPP1P10451 314 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 PF4V1P10720 104 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 RAB4AP20338 218 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 FGF7P21781 194 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 ATP6V0CP27449 155 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 PPIFP30405 207 aaKnown RBP3.91□□□□□ -1.78
VTI1B-202ENST00000553619 FCGR2BP31994 310 aaPredicted RBP3.91□□□□□ -1.78
VTI1B-202ENST00000553619 RPL29P47914 159 aaKnown RBP3.91□□□□□ -1.78
VTI1B-202ENST00000553619 RAB9AP51151 201 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 SSBP2P81877 361 aaPredicted RBP3.91□□□□□ -1.78
VTI1B-202ENST00000553619 ARL16Q0P5N6 197 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 COTL1Q14019 142 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 GAMTQ14353 236 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 Q56UQ5 140 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 PXDC1Q5TGL8 231 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 ASPHD1Q5U4P2 390 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 SPSB3Q6PJ21 355 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 SLC16A13Q7RTY0 426 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 HSD17B11Q8NBQ5 300 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 BPIFCQ8NFQ6 507 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 Q8WTZ3 238 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 NPIPB3Q92617 1050 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 SAT2Q96F10 170 aaPredicted RBP3.91□□□□□ -1.78
VTI1B-202ENST00000553619 BSCL2Q96G97 398 aaPredicted RBP3.91□□□□□ -1.78
VTI1B-202ENST00000553619 ACY3Q96HD9 319 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 TRGV9Q99603 122 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 C16orf95Q9H693 158 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 C21orf62Q9NYP8 219 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 WDR83OSQ9Y284 106 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 POLQO75417 2590 aa3.91□□□□□ -1.78
VTI1B-202ENST00000553619 UTP20O75691 2785 aaKnown RBP3.91□□□□□ -1.78
VTI1B-202ENST00000553619 CCDC168Q8NDH2 2452 aa3.9□□□□□ -1.78
VTI1B-202ENST00000553619 MYO9AB2RTY4 2548 aa3.9□□□□□ -1.78
VTI1B-202ENST00000553619 HIVEP2P31629 2446 aa3.9□□□□□ -1.78
VTI1B-202ENST00000553619 CREBBPQ92793 2442 aa3.9□□□□□ -1.78
VTI1B-202ENST00000553619 UBE2L5PA0A1B0GUS4 154 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 A0A1W2PPV4 95 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 TCRBV4S1A1TA0A5B7 111 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 SH2D7A6NKC9 451 aaPredicted RBP3.9□□□□□ -1.79
VTI1B-202ENST00000553619 G3V318 75 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 I3L2K1 104 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 K7EIM0 57 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 AGPAT2O15120 278 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 NUPL2O15504 423 aaKnown RBP3.9□□□□□ -1.79
VTI1B-202ENST00000553619 OR2J3O76001 311 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 NDUFB8O95169 186 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 NDUFA7O95182 113 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 IGHG4P01861 327 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 HBE1P02100 147 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 PRH1P02810 166 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 MDKP21741 143 aaPredicted RBP3.9□□□□□ -1.79
VTI1B-202ENST00000553619 SULT1A2P50226 295 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 RND2P52198 227 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 TPPP2P59282 170 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 YPEL3P61236 119 aaPredicted RBP3.9□□□□□ -1.79
VTI1B-202ENST00000553619 RHOGP84095 191 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 NDPQ00604 133 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 ZNF616Q08AN1 781 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 CFAP161Q6P656 301 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 CYP2G1PQ6ZSU1 146 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 Q71RC1 249 aaPredicted RBP3.9□□□□□ -1.79
VTI1B-202ENST00000553619 HAPLN4Q86UW8 402 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 THAP8Q8NA92 274 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 OR4X2Q8NGF9 303 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 OR1L4Q8NGR5 311 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 OR4F5Q8NH21 305 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 TMEM170AQ8WVE7 144 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 MS4A10Q96PG2 267 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 PFDN5Q99471 154 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 NPCDR1Q9BY65 106 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 ACTR3CQ9C0K3 210 aaPredicted RBP3.9□□□□□ -1.79
VTI1B-202ENST00000553619 FNDC4Q9H6D8 234 aaPredicted RBP3.9□□□□□ -1.79
VTI1B-202ENST00000553619 ZNF702PQ9H963 129 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 SLC39A9Q9NUM3 307 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 LINC00527Q9UJ94 153 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 LSM4Q9Y4Z0 139 aaKnown RBP3.9□□□□□ -1.79
VTI1B-202ENST00000553619 LRBAP50851 2863 aa3.9□□□□□ -1.79
VTI1B-202ENST00000553619 APCP25054 2843 aa3.89□□□□□ -1.79
VTI1B-202ENST00000553619 PRSS47A8MTI9 375 aa3.89□□□□□ -1.79
VTI1B-202ENST00000553619 CLEC3BP05452 202 aa3.89□□□□□ -1.79
VTI1B-202ENST00000553619 RD3LP0DJH9 198 aa3.89□□□□□ -1.79
VTI1B-202ENST00000553619 OR10J1P30954 320 aa3.89□□□□□ -1.79
VTI1B-202ENST00000553619 MFAP2P55001 183 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms