RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 TMEM70Q9BUB7 260 aa9.45□□□□□ -0.9
PRPF39-204ENST00000553605 C8orf4Q9NR00 106 aa9.45□□□□□ -0.9
PRPF39-204ENST00000553605 SOCS3O14543 225 aa9.44□□□□□ -0.9
PRPF39-204ENST00000553605 ETV6P41212 452 aa9.44□□□□□ -0.9
PRPF39-204ENST00000553605 RFX2P48378 723 aa9.44□□□□□ -0.9
PRPF39-204ENST00000553605 PHLDA2Q53GA4 152 aa9.44□□□□□ -0.9
PRPF39-204ENST00000553605 AMTNQ6UX39 209 aa9.44□□□□□ -0.9
PRPF39-204ENST00000553605 DOK5Q9P104 306 aa9.44□□□□□ -0.9
PRPF39-204ENST00000553605 LRP1Q07954 4544 aaKnown RBP9.43□□□□□ -0.9
PRPF39-204ENST00000553605 NOTOA8MTQ0 251 aa9.43□□□□□ -0.9
PRPF39-204ENST00000553605 A8MTW9 85 aa9.43□□□□□ -0.9
PRPF39-204ENST00000553605 SIVA1O15304 175 aa9.43□□□□□ -0.9
PRPF39-204ENST00000553605 CRXO43186 299 aaPredicted RBP9.43□□□□□ -0.9
PRPF39-204ENST00000553605 INSP01308 110 aa9.43□□□□□ -0.9
PRPF39-204ENST00000553605 RD3LP0DJH9 198 aa9.43□□□□□ -0.9
PRPF39-204ENST00000553605 HSPA13P48723 471 aa9.43□□□□□ -0.9
PRPF39-204ENST00000553605 RND2P52198 227 aa9.43□□□□□ -0.9
PRPF39-204ENST00000553605 PRSS54Q6PEW0 395 aa9.43□□□□□ -0.9
PRPF39-204ENST00000553605 NFE4Q86UQ8 179 aa9.43□□□□□ -0.9
PRPF39-204ENST00000553605 GPR146Q96CH1 333 aa9.43□□□□□ -0.9
PRPF39-204ENST00000553605 RPRMQ9NS64 109 aa9.43□□□□□ -0.9
PRPF39-204ENST00000553605 RHBDL2Q9NX52 303 aa9.43□□□□□ -0.9
PRPF39-204ENST00000553605 TIMM8BQ9Y5J9 83 aaPredicted RBP9.43□□□□□ -0.9
PRPF39-204ENST00000553605 A0A0B4J293 547 aa9.42□□□□□ -0.9
PRPF39-204ENST00000553605 MEIS3P1A6NDR6 274 aa9.42□□□□□ -0.9
PRPF39-204ENST00000553605 ZNF701M0R085 212 aaPredicted RBP9.42□□□□□ -0.9
PRPF39-204ENST00000553605 M0R2Z0 102 aa9.42□□□□□ -0.9
PRPF39-204ENST00000553605 ISLRO14498 428 aa9.42□□□□□ -0.9
PRPF39-204ENST00000553605 TOMM40O96008 361 aa9.42□□□□□ -0.9
PRPF39-204ENST00000553605 S100GP29377 79 aa9.42□□□□□ -0.9
PRPF39-204ENST00000553605 CBX5P45973 191 aa9.42□□□□□ -0.9
PRPF39-204ENST00000553605 SPINK13Q1W4C9 94 aa9.42□□□□□ -0.9
PRPF39-204ENST00000553605 TBC1D26Q86UD7 250 aa9.42□□□□□ -0.9
PRPF39-204ENST00000553605 OR51G1Q8NGK1 321 aa9.42□□□□□ -0.9
PRPF39-204ENST00000553605 OR10J6PQ8NGY7 276 aa9.42□□□□□ -0.9
PRPF39-204ENST00000553605 PDCD10Q9BUL8 212 aa9.42□□□□□ -0.9
PRPF39-204ENST00000553605 FXYD6Q9H0Q3 95 aa9.42□□□□□ -0.9
PRPF39-204ENST00000553605 ENY2Q9NPA8 101 aa9.42□□□□□ -0.9
PRPF39-204ENST00000553605 RRP15Q9Y3B9 282 aaKnown RBP9.42□□□□□ -0.9
PRPF39-204ENST00000553605 TRDV1A0A1B0GX56 115 aa9.41□□□□□ -0.9
PRPF39-204ENST00000553605 H3BNG1 76 aa9.41□□□□□ -0.9
PRPF39-204ENST00000553605 PMP2P02689 132 aa9.41□□□□□ -0.9
PRPF39-204ENST00000553605 P0C879 139 aa9.41□□□□□ -0.9
PRPF39-204ENST00000553605 SLC25A4P12235 298 aa9.41□□□□□ -0.9
PRPF39-204ENST00000553605 PSMB9P28065 219 aa9.41□□□□□ -0.9
PRPF39-204ENST00000553605 NUP62P37198 522 aaPredicted RBP9.41□□□□□ -0.9
PRPF39-204ENST00000553605 BSXQ3C1V8 233 aa9.41□□□□□ -0.9
PRPF39-204ENST00000553605 C22orf42Q6IC83 251 aa9.41□□□□□ -0.9
PRPF39-204ENST00000553605 LINC01587Q99440 93 aa9.41□□□□□ -0.9
PRPF39-204ENST00000553605 AUNIPQ9H7T9 357 aa9.41□□□□□ -0.9
PRPF39-204ENST00000553605 NOP10Q9NPE3 64 aaKnown RBP9.41□□□□□ -0.9
PRPF39-204ENST00000553605 PFDN2Q9UHV9 154 aa9.41□□□□□ -0.9
PRPF39-204ENST00000553605 RGS10O43665 173 aa9.4□□□□□ -0.9
PRPF39-204ENST00000553605 PSG1P11464 419 aa9.4□□□□□ -0.9
PRPF39-204ENST00000553605 HTN1P15515 57 aa9.4□□□□□ -0.9
PRPF39-204ENST00000553605 ELK1P19419 428 aa9.4□□□□□ -0.9
PRPF39-204ENST00000553605 HOXA5P20719 270 aa9.4□□□□□ -0.9
PRPF39-204ENST00000553605 TAS2R20P59543 309 aa9.4□□□□□ -0.9
PRPF39-204ENST00000553605 DMRTA1Q5VZB9 504 aa9.4□□□□□ -0.9
PRPF39-204ENST00000553605 GPR141Q7Z602 305 aa9.4□□□□□ -0.9
PRPF39-204ENST00000553605 OR11H7Q8NGC8 314 aa9.4□□□□□ -0.9
PRPF39-204ENST00000553605 RNF125Q96EQ8 232 aa9.4□□□□□ -0.9
PRPF39-204ENST00000553605 C16orf74Q96GX8 76 aa9.4□□□□□ -0.9
PRPF39-204ENST00000553605 C20orf173Q96LM9 149 aa9.4□□□□□ -0.9
PRPF39-204ENST00000553605 DUSP21Q9H596 190 aa9.4□□□□□ -0.9
PRPF39-204ENST00000553605 IFT46Q9NQC8 304 aa9.4□□□□□ -0.9
PRPF39-204ENST00000553605 TPRKBQ9Y3C4 175 aa9.4□□□□□ -0.9
PRPF39-204ENST00000553605 RNF213Q63HN8 5207 aa9.39□□□□□ -0.91
PRPF39-204ENST00000553605 IGLV5-52A0A0A0MRZ9 124 aa9.39□□□□□ -0.91
PRPF39-204ENST00000553605 OXTP01178 125 aa9.39□□□□□ -0.91
PRPF39-204ENST00000553605 IGKV1-5P01602 117 aa9.39□□□□□ -0.91
PRPF39-204ENST00000553605 LPCAT3Q6P1A2 487 aa9.39□□□□□ -0.91
PRPF39-204ENST00000553605 BAP18Q8IXM2 172 aa9.39□□□□□ -0.91
PRPF39-204ENST00000553605 NPIPB3Q92617 1050 aa9.39□□□□□ -0.91
PRPF39-204ENST00000553605 PBDC1Q9BVG4 233 aa9.39□□□□□ -0.91
PRPF39-204ENST00000553605 TRAV12-2A0A075B6T6 113 aa9.38□□□□□ -0.91
PRPF39-204ENST00000553605 A0A0A6YYH2 397 aa9.38□□□□□ -0.91
PRPF39-204ENST00000553605 A6NJ64 397 aa9.38□□□□□ -0.91
PRPF39-204ENST00000553605 ADAP1O75689 374 aa9.38□□□□□ -0.91
PRPF39-204ENST00000553605 NXPH3O95157 252 aa9.38□□□□□ -0.91
PRPF39-204ENST00000553605 HTR2BP41595 481 aa9.38□□□□□ -0.91
PRPF39-204ENST00000553605 CNN1P51911 297 aaKnown RBP9.38□□□□□ -0.91
PRPF39-204ENST00000553605 TAS2R60P59551 318 aa9.38□□□□□ -0.91
PRPF39-204ENST00000553605 TBCEQ15813 527 aaPredicted RBP9.38□□□□□ -0.91
PRPF39-204ENST00000553605 C1orf194Q5T5A4 169 aa9.38□□□□□ -0.91
PRPF39-204ENST00000553605 SAMD13Q5VXD3 122 aa9.38□□□□□ -0.91
PRPF39-204ENST00000553605 SFXN4Q6P4A7 337 aa9.38□□□□□ -0.91
PRPF39-204ENST00000553605 TMEM144Q7Z5S9 345 aa9.38□□□□□ -0.91
PRPF39-204ENST00000553605 OR5H2Q8NGV7 314 aa9.38□□□□□ -0.91
PRPF39-204ENST00000553605 C16orf92Q96LL3 132 aa9.38□□□□□ -0.91
PRPF39-204ENST00000553605 NDUFB11Q9NX14 153 aa9.38□□□□□ -0.91
PRPF39-204ENST00000553605 FAM30AQ9NZY2 134 aa9.38□□□□□ -0.91
PRPF39-204ENST00000553605 A0A096LPF7 62 aa9.37□□□□□ -0.91
PRPF39-204ENST00000553605 DUSP14O95147 198 aaKnown RBP9.37□□□□□ -0.91
PRPF39-204ENST00000553605 AKR1C2P52895 323 aa9.37□□□□□ -0.91
PRPF39-204ENST00000553605 SUPT4H1P63272 117 aaKnown RBP9.37□□□□□ -0.91
PRPF39-204ENST00000553605 OR8G2PQ6IF36 304 aa9.37□□□□□ -0.91
PRPF39-204ENST00000553605 LINC00528Q8N1L1 170 aa9.37□□□□□ -0.91
PRPF39-204ENST00000553605 TMEM256Q8N2U0 113 aa9.37□□□□□ -0.91
PRPF39-204ENST00000553605 SLC24A4Q8NFF2 622 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms