RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 OR2F1Q13607 317 aa17.09■□□□□ 0.33
TDP1-206ENST00000553569 LILRB2Q8N423 598 aa17.09■□□□□ 0.33
TDP1-206ENST00000553569 THAP8Q8NA92 274 aa17.09■□□□□ 0.33
TDP1-206ENST00000553569 OR51G1Q8NGK1 321 aa17.09■□□□□ 0.33
TDP1-206ENST00000553569 TRGV9Q99603 122 aa17.09■□□□□ 0.33
TDP1-206ENST00000553569 TUBA4BQ9H853 241 aa17.09■□□□□ 0.33
TDP1-206ENST00000553569 IGKV1OR2-108A0A075B7D4 117 aa17.08■□□□□ 0.32
TDP1-206ENST00000553569 FABP1P07148 127 aa17.08■□□□□ 0.32
TDP1-206ENST00000553569 HNRNPCP07910 306 aaKnown RBP eCLIP17.08■□□□□ 0.32
TDP1-206ENST00000553569 PVALBP20472 110 aaPredicted RBP17.08■□□□□ 0.32
TDP1-206ENST00000553569 TFPI2P48307 235 aa17.08■□□□□ 0.32
TDP1-206ENST00000553569 CAV2P51636 162 aa17.08■□□□□ 0.32
TDP1-206ENST00000553569 IL15RAQ13261 267 aa17.08■□□□□ 0.32
TDP1-206ENST00000553569 DEFB125Q8N687 156 aa17.08■□□□□ 0.32
TDP1-206ENST00000553569 OR10P1Q8NGE3 313 aa17.08■□□□□ 0.32
TDP1-206ENST00000553569 RNF125Q96EQ8 232 aa17.08■□□□□ 0.32
TDP1-206ENST00000553569 PBDC1Q9BVG4 233 aa17.08■□□□□ 0.32
TDP1-206ENST00000553569 TGP01266 2768 aa17.07■□□□□ 0.32
TDP1-206ENST00000553569 A0A1W2PS18 150 aa17.07■□□□□ 0.32
TDP1-206ENST00000553569 OR11H12B2RN74 326 aa17.07■□□□□ 0.32
TDP1-206ENST00000553569 DFFBO76075 338 aa17.07■□□□□ 0.32
TDP1-206ENST00000553569 LYZP61626 148 aa17.07■□□□□ 0.32
TDP1-206ENST00000553569 DLK1P80370 383 aa17.07■□□□□ 0.32
TDP1-206ENST00000553569 GBGT1Q8N5D6 347 aa17.07■□□□□ 0.32
TDP1-206ENST00000553569 C11orf1Q9H5F2 150 aa17.07■□□□□ 0.32
TDP1-206ENST00000553569 UBQLN2Q9UHD9 624 aa17.07■□□□□ 0.32
TDP1-206ENST00000553569 OR4C46A6NHA9 309 aa17.06■□□□□ 0.32
TDP1-206ENST00000553569 P2RY1P47900 373 aa17.06■□□□□ 0.32
TDP1-206ENST00000553569 RPL11P62913 178 aaKnown RBP17.06■□□□□ 0.32
TDP1-206ENST00000553569 ARL16Q0P5N6 197 aa17.06■□□□□ 0.32
TDP1-206ENST00000553569 FAM90A2PQ658T7 463 aa17.06■□□□□ 0.32
TDP1-206ENST00000553569 GRAMD2BQ96HH9 432 aa17.06■□□□□ 0.32
TDP1-206ENST00000553569 C19orf73Q9NVV2 129 aa17.06■□□□□ 0.32
TDP1-206ENST00000553569 MGAT4CQ9UBM8 478 aa17.06■□□□□ 0.32
TDP1-206ENST00000553569 RABAC1Q9UI14 185 aa17.06■□□□□ 0.32
TDP1-206ENST00000553569 ALG5Q9Y673 324 aa17.06■□□□□ 0.32
TDP1-206ENST00000553569 FAM24AA6NFZ4 105 aa17.05■□□□□ 0.32
TDP1-206ENST00000553569 A8MZ25 164 aa17.05■□□□□ 0.32
TDP1-206ENST00000553569 LRRC37A5PQ49AS3 106 aa17.05■□□□□ 0.32
TDP1-206ENST00000553569 TMEM144Q7Z5S9 345 aa17.05■□□□□ 0.32
TDP1-206ENST00000553569 NMES1Q9C002 83 aa17.05■□□□□ 0.32
TDP1-206ENST00000553569 SRD5A3Q9H8P0 318 aa17.05■□□□□ 0.32
TDP1-206ENST00000553569 CD5P06127 495 aa17.04■□□□□ 0.32
TDP1-206ENST00000553569 H2BFSP57053 126 aa17.04■□□□□ 0.32
TDP1-206ENST00000553569 WFDC3Q8IUB2 231 aa17.04■□□□□ 0.32
TDP1-206ENST00000553569 SBSPONQ8IVN8 264 aa17.04■□□□□ 0.32
TDP1-206ENST00000553569 U3KQE9 123 aa17.04■□□□□ 0.32
TDP1-206ENST00000553569 CST7O76096 145 aa17.03■□□□□ 0.32
TDP1-206ENST00000553569 PAFAH1B2P68402 229 aa17.03■□□□□ 0.32
TDP1-206ENST00000553569 LYRM2Q9NU23 88 aaPredicted RBP17.03■□□□□ 0.32
TDP1-206ENST00000553569 DNASE2O00115 360 aaPredicted RBP17.02■□□□□ 0.32
TDP1-206ENST00000553569 DEDDO75618 318 aa17.02■□□□□ 0.32
TDP1-206ENST00000553569 GATA2P23769 480 aaPredicted RBP17.02■□□□□ 0.32
TDP1-206ENST00000553569 EIF2B2P49770 351 aaKnown RBP17.02■□□□□ 0.32
TDP1-206ENST00000553569 SLC38A11Q08AI6 406 aa17.02■□□□□ 0.32
TDP1-206ENST00000553569 TMEM217Q8N7C4 229 aa17.02■□□□□ 0.32
TDP1-206ENST00000553569 MS4A6AQ9H2W1 248 aa17.02■□□□□ 0.32
TDP1-206ENST00000553569 IGSF23A1L1A6 192 aa17.01■□□□□ 0.31
TDP1-206ENST00000553569 FNDC10F2Z333 226 aa17.01■□□□□ 0.31
TDP1-206ENST00000553569 CYCSP99999 105 aaKnown RBP17.01■□□□□ 0.31
TDP1-206ENST00000553569 ODF3L2Q3SX64 289 aa17.01■□□□□ 0.31
TDP1-206ENST00000553569 C16orf54Q6UWD8 224 aa17.01■□□□□ 0.31
TDP1-206ENST00000553569 TMEM182Q6ZP80 229 aaPredicted RBP17.01■□□□□ 0.31
TDP1-206ENST00000553569 CYP2G1PQ6ZSU1 146 aa17.01■□□□□ 0.31
TDP1-206ENST00000553569 BPIFCQ8NFQ6 507 aa17.01■□□□□ 0.31
TDP1-206ENST00000553569 STXBP6Q8NFX7 210 aa17.01■□□□□ 0.31
TDP1-206ENST00000553569 GLMPQ8WWB7 406 aa17.01■□□□□ 0.31
TDP1-206ENST00000553569 NPVFQ9HCQ7 196 aa17.01■□□□□ 0.31
TDP1-206ENST00000553569 RLN2P04090 185 aa17■□□□□ 0.31
TDP1-206ENST00000553569 NHLRC4P0CG21 123 aaPredicted RBP17■□□□□ 0.31
TDP1-206ENST00000553569 RGS21Q2M5E4 152 aa17■□□□□ 0.31
TDP1-206ENST00000553569 STX12Q86Y82 276 aa17■□□□□ 0.31
TDP1-206ENST00000553569 TMEM252Q8N6L7 170 aa17■□□□□ 0.31
TDP1-206ENST00000553569 PPP1R14BQ96C90 147 aa17■□□□□ 0.31
TDP1-206ENST00000553569 GGACTQ9BVM4 153 aa17■□□□□ 0.31
TDP1-206ENST00000553569 OR5AC2Q9NZP5 309 aa17■□□□□ 0.31
TDP1-206ENST00000553569 RBMY1BA6NDE4 496 aaKnown RBP16.99■□□□□ 0.31
TDP1-206ENST00000553569 RBMY1EA6NEQ0 496 aaKnown RBP16.99■□□□□ 0.31
TDP1-206ENST00000553569 RBMY1DP0C7P1 496 aaKnown RBP16.99■□□□□ 0.31
TDP1-206ENST00000553569 NUP62P37198 522 aaPredicted RBP16.99■□□□□ 0.31
TDP1-206ENST00000553569 PFDN2Q9UHV9 154 aa16.99■□□□□ 0.31
TDP1-206ENST00000553569 DNAH9Q9NYC9 4486 aa16.98■□□□□ 0.31
TDP1-206ENST00000553569 HELTA6NFD8 242 aa16.98■□□□□ 0.31
TDP1-206ENST00000553569 BUB3O43684 328 aa16.98■□□□□ 0.31
TDP1-206ENST00000553569 CFDP00746 253 aaPredicted RBP16.98■□□□□ 0.31
TDP1-206ENST00000553569 ORM2P19652 201 aa16.98■□□□□ 0.31
TDP1-206ENST00000553569 SULT1A1P50225 295 aa16.98■□□□□ 0.31
TDP1-206ENST00000553569 TEPPQ6URK8 271 aa16.98■□□□□ 0.31
TDP1-206ENST00000553569 PPP1R1CQ8WVI7 109 aa16.98■□□□□ 0.31
TDP1-206ENST00000553569 CITED4Q96RK1 184 aa16.98■□□□□ 0.31
TDP1-206ENST00000553569 DOK5Q9P104 306 aa16.98■□□□□ 0.31
TDP1-206ENST00000553569 E5RGE8 158 aa16.97■□□□□ 0.31
TDP1-206ENST00000553569 H0YIZ8 118 aa16.97■□□□□ 0.31
TDP1-206ENST00000553569 HAGHQ16775 308 aa16.97■□□□□ 0.31
TDP1-206ENST00000553569 SIGLEC15Q6ZMC9 328 aa16.97■□□□□ 0.31
TDP1-206ENST00000553569 STPG3Q8N7X2 389 aa16.97■□□□□ 0.31
TDP1-206ENST00000553569 OR1B1Q8NGR6 318 aa16.97■□□□□ 0.31
TDP1-206ENST00000553569 TRAV2A0A0B4J234 112 aa16.96■□□□□ 0.31
TDP1-206ENST00000553569 LINC00869P0C866 280 aa16.96■□□□□ 0.31
TDP1-206ENST00000553569 APRG1Q8IVJ8 170 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms