RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 NAA60Q9H7X0 242 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 COMMD9Q9P000 198 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 THYN1Q9P016 225 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 PRNDQ9UKY0 176 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 GPR132Q9UNW8 380 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 ZNF257Q9Y2Q1 563 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 V9GYH0 126 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 VWFP04275 2813 aa3.56□□□□□ -1.84
ATXN3-220ENST00000553491 FAM223BA6NKX1 122 aa3.56□□□□□ -1.84
ATXN3-220ENST00000553491 H0Y980 276 aa3.56□□□□□ -1.84
ATXN3-220ENST00000553491 H3BUA1 57 aa3.56□□□□□ -1.84
ATXN3-220ENST00000553491 ATP6V1G1O75348 118 aa3.56□□□□□ -1.84
ATXN3-220ENST00000553491 UPK1BO75841 260 aa3.56□□□□□ -1.84
ATXN3-220ENST00000553491 DUS4LO95620 317 aaKnown RBP3.56□□□□□ -1.84
ATXN3-220ENST00000553491 IGKV1-39P01597 117 aa3.56□□□□□ -1.84
ATXN3-220ENST00000553491 TRBV12-3P01733 135 aa3.56□□□□□ -1.84
ATXN3-220ENST00000553491 IGKV1D-39P04432 117 aa3.56□□□□□ -1.84
ATXN3-220ENST00000553491 ZP3P21754 424 aa3.56□□□□□ -1.84
ATXN3-220ENST00000553491 CRIP2P52943 208 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-220ENST00000553491 SUB1P53999 127 aaKnown RBP eCLIP3.56□□□□□ -1.84
ATXN3-220ENST00000553491 RND3P61587 244 aa3.56□□□□□ -1.84
ATXN3-220ENST00000553491 HSPE1P61604 102 aaKnown RBP3.56□□□□□ -1.84
ATXN3-220ENST00000553491 ZNF79Q15937 498 aa3.56□□□□□ -1.84
ATXN3-220ENST00000553491 Q56UQ5 140 aa3.56□□□□□ -1.84
ATXN3-220ENST00000553491 PLET1Q6UQ28 207 aa3.56□□□□□ -1.84
ATXN3-220ENST00000553491 LHFPL1Q86WI0 220 aa3.56□□□□□ -1.84
ATXN3-220ENST00000553491 FAM223AQ8IWN6 122 aa3.56□□□□□ -1.84
ATXN3-220ENST00000553491 LRTM2Q8N967 370 aa3.56□□□□□ -1.84
ATXN3-220ENST00000553491 NECAP1Q8NC96 275 aa3.56□□□□□ -1.84
ATXN3-220ENST00000553491 WFDC9Q8NEX5 89 aa3.56□□□□□ -1.84
ATXN3-220ENST00000553491 OR1S1Q8NH92 325 aa3.56□□□□□ -1.84
ATXN3-220ENST00000553491 GLYATL2Q8WU03 294 aa3.56□□□□□ -1.84
ATXN3-220ENST00000553491 GPR146Q96CH1 333 aa3.56□□□□□ -1.84
ATXN3-220ENST00000553491 SEC22AQ96IW7 307 aa3.56□□□□□ -1.84
ATXN3-220ENST00000553491 GPR61Q9BZJ8 451 aa3.56□□□□□ -1.84
ATXN3-220ENST00000553491 SRRQ9GZT4 340 aa3.56□□□□□ -1.84
ATXN3-220ENST00000553491 TMEM222Q9H0R3 208 aa3.56□□□□□ -1.84
ATXN3-220ENST00000553491 C5orf66Q9H5L9 145 aa3.56□□□□□ -1.84
ATXN3-220ENST00000553491 PLEKHA3Q9HB20 300 aa3.56□□□□□ -1.84
ATXN3-220ENST00000553491 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-220ENST00000553491 FLVCR2Q9UPI3 526 aa3.56□□□□□ -1.84
ATXN3-220ENST00000553491 TRAV6A0A075B6T7 132 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 IGHV3OR16-8A0A075B7F1 116 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 TRBV7-1A0A0A6YYK4 115 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 A0A1B0GW64 132 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 NAP1L6A6NFF2 107 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 OR2T8A6NH00 312 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 CRYM-AS1A6NIL9 109 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 C15orf61A6NNL5 157 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 ZNF207O43670 478 aaKnown RBP3.55□□□□□ -1.84
ATXN3-220ENST00000553491 GGCTO75223 188 aaKnown RBP3.55□□□□□ -1.84
ATXN3-220ENST00000553491 CDK2AP2O75956 126 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 YIF1AO95070 293 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 CDS2O95674 445 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 IFNA10P01566 189 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 IGKV1-5P01602 117 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 IGKV3-20P01619 116 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 IL7P13232 177 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 CTRB1P17538 263 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 GPR183P32249 361 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 RUNX1Q01196 453 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 WT1-ASQ06250 92 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 TMEM187Q14656 261 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 OPCMLQ14982 345 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 SURF2Q15527 256 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-220ENST00000553491 POU2AF1Q16633 256 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 GUCA2BQ16661 112 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 FAM106AQ4KMX7 169 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 CTRB2Q6GPI1 263 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 THOC7Q6I9Y2 204 aaKnown RBP3.55□□□□□ -1.84
ATXN3-220ENST00000553491 ZNF343Q6P1L6 599 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 LYZL2Q7Z4W2 148 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 LGI3Q8N145 548 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 DYNLRB2Q8TF09 96 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 RBPMSQ93062 196 aaKnown RBP3.55□□□□□ -1.84
ATXN3-220ENST00000553491 LSM10Q969L4 123 aaKnown RBP3.55□□□□□ -1.84
ATXN3-220ENST00000553491 CXorf58Q96LI9 332 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 SLC25A21Q9BQT8 299 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-220ENST00000553491 C20orf24Q9BUV8 137 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 SRD5A3Q9H8P0 318 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 NDUFA4L2Q9NRX3 87 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 GSKIPQ9P0R6 139 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 MDFICQ9P1T7 246 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 ZMAT5Q9UDW3 170 aaKnown RBP3.55□□□□□ -1.84
ATXN3-220ENST00000553491 CACNG5Q9UF02 275 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 AGRNO00468 2067 aa3.55□□□□□ -1.84
ATXN3-220ENST00000553491 NOTCH1P46531 2555 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.54□□□□□ -1.84
ATXN3-220ENST00000553491 TRBV9A0A0B4J1U6 114 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 A0A0G2JRQ6 117 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 FAM240BA0A1B0GVZ2 78 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 WI2-2373I1.2A0A1W2PRP0 233 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 IGLC7A0M8Q6 106 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 MFSD2BA6NFX1 497 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 FAM25EA8MYX2 175 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 SNURFLB1AK76 121 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 LYRM1O43325 122 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 GNG7O60262 68 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 B3GALNT1O75752 331 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms