RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 POLR2GP62487 172 aaKnown RBP eCLIP11.4□□□□□ -0.58
SHMT2-204ENST00000553324 ASAH1Q13510 395 aa11.4□□□□□ -0.58
SHMT2-204ENST00000553324 IAH1Q2TAA2 248 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-204ENST00000553324 KIR2DL5AQ8N109 375 aa11.4□□□□□ -0.58
SHMT2-204ENST00000553324 KIR2DL5BQ8NHK3 375 aa11.4□□□□□ -0.58
SHMT2-204ENST00000553324 ZNF431Q8TF32 576 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-204ENST00000553324 SMIM8Q96KF7 97 aa11.4□□□□□ -0.58
SHMT2-204ENST00000553324 UPK1BO75841 260 aa11.39□□□□□ -0.59
SHMT2-204ENST00000553324 TAS2R30P59541 319 aa11.39□□□□□ -0.59
SHMT2-204ENST00000553324 WFDC3Q8IUB2 231 aa11.39□□□□□ -0.59
SHMT2-204ENST00000553324 MUC7Q8TAX7 377 aa11.39□□□□□ -0.59
SHMT2-204ENST00000553324 RAB40CQ96S21 281 aa11.39□□□□□ -0.59
SHMT2-204ENST00000553324 TRGV9Q99603 122 aa11.39□□□□□ -0.59
SHMT2-204ENST00000553324 PSENENQ9NZ42 101 aa11.39□□□□□ -0.59
SHMT2-204ENST00000553324 GSKIPQ9P0R6 139 aa11.39□□□□□ -0.59
SHMT2-204ENST00000553324 TENM3Q9P273 2699 aa11.38□□□□□ -0.59
SHMT2-204ENST00000553324 S100A7P31151 101 aa11.38□□□□□ -0.59
SHMT2-204ENST00000553324 USF2Q15853 346 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-204ENST00000553324 OR8G2PQ6IF36 304 aa11.38□□□□□ -0.59
SHMT2-204ENST00000553324 C16orf54Q6UWD8 224 aa11.38□□□□□ -0.59
SHMT2-204ENST00000553324 Q6ZWC4 215 aa11.38□□□□□ -0.59
SHMT2-204ENST00000553324 STPG3Q8N7X2 389 aa11.38□□□□□ -0.59
SHMT2-204ENST00000553324 THAP8Q8NA92 274 aa11.38□□□□□ -0.59
SHMT2-204ENST00000553324 ZBTB8BQ8NAP8 495 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-204ENST00000553324 RNF125Q96EQ8 232 aa11.38□□□□□ -0.59
SHMT2-204ENST00000553324 TBC1D24Q9ULP9 559 aa11.38□□□□□ -0.59
SHMT2-204ENST00000553324 IGKV1D-37A0A075B6S9 117 aa11.37□□□□□ -0.59
SHMT2-204ENST00000553324 BUB3O43684 328 aa11.37□□□□□ -0.59
SHMT2-204ENST00000553324 SSSCA1O60232 199 aa11.37□□□□□ -0.59
SHMT2-204ENST00000553324 ZNF90Q03938 601 aa11.37□□□□□ -0.59
SHMT2-204ENST00000553324 APRG1Q8IVJ8 170 aa11.37□□□□□ -0.59
SHMT2-204ENST00000553324 C12orf45Q8N5I9 185 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-204ENST00000553324 ENKURQ8TC29 256 aa11.37□□□□□ -0.59
SHMT2-204ENST00000553324 MAP6D1Q9H9H5 199 aa11.37□□□□□ -0.59
SHMT2-204ENST00000553324 EDA2RQ9HAV5 297 aa11.37□□□□□ -0.59
SHMT2-204ENST00000553324 TP53TG1Q9Y2A0 90 aa11.37□□□□□ -0.59
SHMT2-204ENST00000553324 DNAH7Q8WXX0 4024 aa11.36□□□□□ -0.59
SHMT2-204ENST00000553324 PRSS46E5RG02 174 aa11.36□□□□□ -0.59
SHMT2-204ENST00000553324 H3BP45 60 aa11.36□□□□□ -0.59
SHMT2-204ENST00000553324 TSC22D2O75157 780 aa11.36□□□□□ -0.59
SHMT2-204ENST00000553324 SCGB1D2O95969 90 aa11.36□□□□□ -0.59
SHMT2-204ENST00000553324 IL5P05113 134 aa11.36□□□□□ -0.59
SHMT2-204ENST00000553324 STXBP6Q8NFX7 210 aa11.36□□□□□ -0.59
SHMT2-204ENST00000553324 IL17DQ8TAD2 202 aa11.36□□□□□ -0.59
SHMT2-204ENST00000553324 GLMPQ8WWB7 406 aa11.36□□□□□ -0.59
SHMT2-204ENST00000553324 PBDC1Q9BVG4 233 aa11.36□□□□□ -0.59
SHMT2-204ENST00000553324 SEPSECSQ9HD40 501 aaKnown RBP11.36□□□□□ -0.59
SHMT2-204ENST00000553324 STAB2Q8WWQ8 2551 aa11.36□□□□□ -0.59
SHMT2-204ENST00000553324 NBEAL2Q6ZNJ1 2754 aa11.35□□□□□ -0.59
SHMT2-204ENST00000553324 C5orf51A6NDU8 294 aa11.35□□□□□ -0.59
SHMT2-204ENST00000553324 FAM25EA8MYX2 175 aa11.35□□□□□ -0.59
SHMT2-204ENST00000553324 FNDC10F2Z333 226 aa11.35□□□□□ -0.59
SHMT2-204ENST00000553324 K7EQG2 157 aa11.35□□□□□ -0.59
SHMT2-204ENST00000553324 LYL1P12980 280 aa11.35□□□□□ -0.59
SHMT2-204ENST00000553324 DEFB131AP59861 70 aa11.35□□□□□ -0.59
SHMT2-204ENST00000553324 C1orf194Q5T5A4 169 aa11.35□□□□□ -0.59
SHMT2-204ENST00000553324 TMEM144Q7Z5S9 345 aa11.35□□□□□ -0.59
SHMT2-204ENST00000553324 OR10P1Q8NGE3 313 aa11.35□□□□□ -0.59
SHMT2-204ENST00000553324 SEC22CQ9BRL7 303 aa11.35□□□□□ -0.59
SHMT2-204ENST00000553324 CSTL1Q9H114 145 aa11.35□□□□□ -0.59
SHMT2-204ENST00000553324 GPN1Q9HCN4 374 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-204ENST00000553324 FBXL17Q9UF56 701 aa11.35□□□□□ -0.59
SHMT2-204ENST00000553324 L7N2F9 121 aa11.34□□□□□ -0.59
SHMT2-204ENST00000553324 MBPP02686 304 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-204ENST00000553324 RPL35AP18077 110 aaKnown RBP11.34□□□□□ -0.59
SHMT2-204ENST00000553324 PAX9P55771 341 aa11.34□□□□□ -0.59
SHMT2-204ENST00000553324 DEFA1P59665 94 aa11.34□□□□□ -0.59
SHMT2-204ENST00000553324 DEFA3P59666 94 aa11.34□□□□□ -0.59
SHMT2-204ENST00000553324 LYZP61626 148 aa11.34□□□□□ -0.59
SHMT2-204ENST00000553324 VAMP2P63027 116 aa11.34□□□□□ -0.59
SHMT2-204ENST00000553324 AKR1C1Q04828 323 aa11.34□□□□□ -0.59
SHMT2-204ENST00000553324 TMEM14EPQ6UXP3 125 aa11.34□□□□□ -0.59
SHMT2-204ENST00000553324 SIGLEC15Q6ZMC9 328 aa11.34□□□□□ -0.59
SHMT2-204ENST00000553324 ACOT7LQ6ZUV0 252 aa11.34□□□□□ -0.59
SHMT2-204ENST00000553324 BPIFCQ8NFQ6 507 aa11.34□□□□□ -0.59
SHMT2-204ENST00000553324 DCANP1Q8TF63 244 aa11.34□□□□□ -0.59
SHMT2-204ENST00000553324 C2orf50Q96LR7 162 aa11.34□□□□□ -0.59
SHMT2-204ENST00000553324 OVOL2Q9BRP0 275 aa11.34□□□□□ -0.59
SHMT2-204ENST00000553324 NPVFQ9HCQ7 196 aa11.34□□□□□ -0.59
SHMT2-204ENST00000553324 RETNQ9HD89 108 aa11.34□□□□□ -0.59
SHMT2-204ENST00000553324 SLC45A2Q9UMX9 530 aa11.34□□□□□ -0.59
SHMT2-204ENST00000553324 IGKV1OR2-108A0A075B7D4 117 aa11.33□□□□□ -0.6
SHMT2-204ENST00000553324 SPRY2O43597 315 aa11.33□□□□□ -0.6
SHMT2-204ENST00000553324 PVALBP20472 110 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-204ENST00000553324 SNRPD3P62318 126 aaKnown RBP11.33□□□□□ -0.6
SHMT2-204ENST00000553324 DLK1P80370 383 aa11.33□□□□□ -0.6
SHMT2-204ENST00000553324 OR2F1Q13607 317 aa11.33□□□□□ -0.6
SHMT2-204ENST00000553324 GSG1LQ6UXU4 331 aa11.33□□□□□ -0.6
SHMT2-204ENST00000553324 S100A7AQ86SG5 101 aa11.33□□□□□ -0.6
SHMT2-204ENST00000553324 STHQ8IWL8 128 aa11.33□□□□□ -0.6
SHMT2-204ENST00000553324 PPP1R14BQ96C90 147 aa11.33□□□□□ -0.6
SHMT2-204ENST00000553324 GGACTQ9BVM4 153 aa11.33□□□□□ -0.6
SHMT2-204ENST00000553324 NRN1Q9NPD7 142 aa11.33□□□□□ -0.6
SHMT2-204ENST00000553324 SMCO3A2RU48 225 aa11.32□□□□□ -0.6
SHMT2-204ENST00000553324 C7orf66A4D0T2 115 aa11.32□□□□□ -0.6
SHMT2-204ENST00000553324 PMS2P5A8MQ11 134 aa11.32□□□□□ -0.6
SHMT2-204ENST00000553324 CCSO14618 274 aa11.32□□□□□ -0.6
SHMT2-204ENST00000553324 PRAF2O60831 178 aa11.32□□□□□ -0.6
SHMT2-204ENST00000553324 METTL15P1P0C7V9 234 aa11.32□□□□□ -0.6
SHMT2-204ENST00000553324 SELENOTP62341 195 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms