RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 MAGT1Q9H0U3 335 aa8.77□□□□□ -1.01
CKAP4-202ENST00000552828 GPN1Q9HCN4 374 aaPredicted RBP8.77□□□□□ -1.01
CKAP4-202ENST00000552828 KLK5Q9Y337 293 aaPredicted RBP8.77□□□□□ -1.01
CKAP4-202ENST00000552828 VPS13DQ5THJ4 4388 aa8.77□□□□□ -1.01
CKAP4-202ENST00000552828 IGHV3-35A0A0C4DH35 117 aa8.76□□□□□ -1.01
CKAP4-202ENST00000552828 LINC00862A6NCI5 91 aa8.76□□□□□ -1.01
CKAP4-202ENST00000552828 WRBO00258 174 aa8.76□□□□□ -1.01
CKAP4-202ENST00000552828 NDUFA4O00483 81 aa8.76□□□□□ -1.01
CKAP4-202ENST00000552828 SSNA1O43805 119 aa8.76□□□□□ -1.01
CKAP4-202ENST00000552828 SCGB2A1O75556 95 aa8.76□□□□□ -1.01
CKAP4-202ENST00000552828 IFNA4P05014 189 aa8.76□□□□□ -1.01
CKAP4-202ENST00000552828 GIPP09681 153 aaPredicted RBP8.76□□□□□ -1.01
CKAP4-202ENST00000552828 IAPPP10997 89 aa8.76□□□□□ -1.01
CKAP4-202ENST00000552828 SLC25A4P12235 298 aa8.76□□□□□ -1.01
CKAP4-202ENST00000552828 ADMP35318 185 aa8.76□□□□□ -1.01
CKAP4-202ENST00000552828 NKX2-1P43699 371 aaPredicted RBP8.76□□□□□ -1.01
CKAP4-202ENST00000552828 RAB11AP62491 216 aa8.76□□□□□ -1.01
CKAP4-202ENST00000552828 RPP30P78346 268 aaKnown RBP8.76□□□□□ -1.01
CKAP4-202ENST00000552828 ID3Q02535 119 aa8.76□□□□□ -1.01
CKAP4-202ENST00000552828 RELQ04864 619 aaPredicted RBP8.76□□□□□ -1.01
CKAP4-202ENST00000552828 MLANAQ16655 118 aa8.76□□□□□ -1.01
CKAP4-202ENST00000552828 IAH1Q2TAA2 248 aaPredicted RBP8.76□□□□□ -1.01
CKAP4-202ENST00000552828 DEFB135Q30KP9 77 aa8.76□□□□□ -1.01
CKAP4-202ENST00000552828 OR4D5Q8NGN0 318 aa8.76□□□□□ -1.01
CKAP4-202ENST00000552828 OR4X1Q8NH49 305 aa8.76□□□□□ -1.01
CKAP4-202ENST00000552828 TMEM170AQ8WVE7 144 aa8.76□□□□□ -1.01
CKAP4-202ENST00000552828 ASB13Q8WXK3 278 aa8.76□□□□□ -1.01
CKAP4-202ENST00000552828 OR10C1Q96KK4 312 aa8.76□□□□□ -1.01
CKAP4-202ENST00000552828 FNDC4Q9H6D8 234 aaPredicted RBP8.76□□□□□ -1.01
CKAP4-202ENST00000552828 GSKIPQ9P0R6 139 aa8.76□□□□□ -1.01
CKAP4-202ENST00000552828 C5orf51A6NDU8 294 aa8.75□□□□□ -1.01
CKAP4-202ENST00000552828 FAM25EA8MYX2 175 aa8.75□□□□□ -1.01
CKAP4-202ENST00000552828 SMLR1H3BR10 107 aa8.75□□□□□ -1.01
CKAP4-202ENST00000552828 CLN5O75503 358 aa8.75□□□□□ -1.01
CKAP4-202ENST00000552828 TMEM50AO95807 157 aa8.75□□□□□ -1.01
CKAP4-202ENST00000552828 CXCL3P19876 107 aa8.75□□□□□ -1.01
CKAP4-202ENST00000552828 RAP2BP61225 183 aa8.75□□□□□ -1.01
CKAP4-202ENST00000552828 ODF3L2Q3SX64 289 aa8.75□□□□□ -1.01
CKAP4-202ENST00000552828 TEX261Q6UWH6 196 aa8.75□□□□□ -1.01
CKAP4-202ENST00000552828 RPP25LQ8N5L8 163 aaKnown RBP8.75□□□□□ -1.01
CKAP4-202ENST00000552828 TMEM217Q8N7C4 229 aa8.75□□□□□ -1.01
CKAP4-202ENST00000552828 STPG3Q8N7X2 389 aa8.75□□□□□ -1.01
CKAP4-202ENST00000552828 DAZ1Q9NQZ3 744 aaKnown RBP8.75□□□□□ -1.01
CKAP4-202ENST00000552828 TRAV30A0A087WSZ9 112 aa8.74□□□□□ -1.01
CKAP4-202ENST00000552828 K7EMT4 169 aa8.74□□□□□ -1.01
CKAP4-202ENST00000552828 CCSO14618 274 aa8.74□□□□□ -1.01
CKAP4-202ENST00000552828 YIF1AO95070 293 aa8.74□□□□□ -1.01
CKAP4-202ENST00000552828 SCGB1D2O95969 90 aa8.74□□□□□ -1.01
CKAP4-202ENST00000552828 IFNA7P01567 189 aa8.74□□□□□ -1.01
CKAP4-202ENST00000552828 GPX4P36969 197 aaPredicted RBP8.74□□□□□ -1.01
CKAP4-202ENST00000552828 POLR2GP62487 172 aaKnown RBP eCLIP8.74□□□□□ -1.01
CKAP4-202ENST00000552828 LGALS9CQ6DKI2 356 aa8.74□□□□□ -1.01
CKAP4-202ENST00000552828 PRSS54Q6PEW0 395 aa8.74□□□□□ -1.01
CKAP4-202ENST00000552828 ZNF680Q8NEM1 530 aa8.74□□□□□ -1.01
CKAP4-202ENST00000552828 OR11H4Q8NGC9 324 aa8.74□□□□□ -1.01
CKAP4-202ENST00000552828 C20orf24Q9BUV8 137 aa8.74□□□□□ -1.01
CKAP4-202ENST00000552828 MAP6D1Q9H9H5 199 aa8.74□□□□□ -1.01
CKAP4-202ENST00000552828 MRPL36Q9P0J6 103 aaKnown RBP8.74□□□□□ -1.01
CKAP4-202ENST00000552828 UBQLN2Q9UHD9 624 aa8.74□□□□□ -1.01
CKAP4-202ENST00000552828 PCLOQ9Y6V0 5065 aa8.73□□□□□ -1.01
CKAP4-202ENST00000552828 DNAH6Q9C0G6 4158 aa8.73□□□□□ -1.01
CKAP4-202ENST00000552828 OR4C46A6NHA9 309 aa8.73□□□□□ -1.01
CKAP4-202ENST00000552828 C15orf62A8K5M9 175 aa8.73□□□□□ -1.01
CKAP4-202ENST00000552828 SSSCA1O60232 199 aa8.73□□□□□ -1.01
CKAP4-202ENST00000552828 RND2P52198 227 aa8.73□□□□□ -1.01
CKAP4-202ENST00000552828 LGALSLQ3ZCW2 172 aaPredicted RBP8.73□□□□□ -1.01
CKAP4-202ENST00000552828 SPANXN5Q5MJ07 72 aa8.73□□□□□ -1.01
CKAP4-202ENST00000552828 GSG1LQ6UXU4 331 aa8.73□□□□□ -1.01
CKAP4-202ENST00000552828 ZNF600Q6ZNG1 722 aa8.73□□□□□ -1.01
CKAP4-202ENST00000552828 TMEM116Q8NCL8 245 aa8.73□□□□□ -1.01
CKAP4-202ENST00000552828 SMIM8Q96KF7 97 aa8.73□□□□□ -1.01
CKAP4-202ENST00000552828 C2orf50Q96LR7 162 aa8.73□□□□□ -1.01
CKAP4-202ENST00000552828 RAB40CQ96S21 281 aa8.73□□□□□ -1.01
CKAP4-202ENST00000552828 PSENENQ9NZ42 101 aa8.73□□□□□ -1.01
CKAP4-202ENST00000552828 STRAPQ9Y3F4 350 aaKnown RBP8.73□□□□□ -1.01
CKAP4-202ENST00000552828 G3V3Q6 166 aa8.72□□□□□ -1.01
CKAP4-202ENST00000552828 CLLU1Q5K131 121 aa8.72□□□□□ -1.01
CKAP4-202ENST00000552828 OR1S2Q8NGQ3 325 aa8.72□□□□□ -1.01
CKAP4-202ENST00000552828 OR2T35Q8NGX2 323 aa8.72□□□□□ -1.01
CKAP4-202ENST00000552828 PHLDA1Q8WV24 401 aaPredicted RBP8.72□□□□□ -1.01
CKAP4-202ENST00000552828 NPIPB3Q92617 1050 aa8.72□□□□□ -1.01
CKAP4-202ENST00000552828 ACY3Q96HD9 319 aa8.72□□□□□ -1.01
CKAP4-202ENST00000552828 SLC35E1Q96K37 410 aa8.72□□□□□ -1.01
CKAP4-202ENST00000552828 MGAT4CQ9UBM8 478 aa8.72□□□□□ -1.01
CKAP4-202ENST00000552828 IGHV3OR16-8A0A075B7F1 116 aa8.71□□□□□ -1.02
CKAP4-202ENST00000552828 HMSDA8MTL9 139 aa8.71□□□□□ -1.02
CKAP4-202ENST00000552828 H3BP45 60 aa8.71□□□□□ -1.02
CKAP4-202ENST00000552828 IGKV1-17P01599 117 aa8.71□□□□□ -1.02
CKAP4-202ENST00000552828 MBPP02686 304 aaPredicted RBP8.71□□□□□ -1.02
CKAP4-202ENST00000552828 IGLC1P0CG04 106 aa8.71□□□□□ -1.02
CKAP4-202ENST00000552828 OR10J1P30954 320 aa8.71□□□□□ -1.02
CKAP4-202ENST00000552828 TAS2R30P59541 319 aa8.71□□□□□ -1.02
CKAP4-202ENST00000552828 TIGITQ495A1 244 aa8.71□□□□□ -1.02
CKAP4-202ENST00000552828 TOMM20LQ6UXN7 152 aa8.71□□□□□ -1.02
CKAP4-202ENST00000552828 Q8WTZ3 238 aa8.71□□□□□ -1.02
CKAP4-202ENST00000552828 ZNF414Q96IQ9 312 aa8.71□□□□□ -1.02
CKAP4-202ENST00000552828 GINS3Q9BRX5 216 aa8.71□□□□□ -1.02
CKAP4-202ENST00000552828 PUS1Q9Y606 427 aaKnown RBP eCLIP8.71□□□□□ -1.02
CKAP4-202ENST00000552828 KIAA1109Q2LD37 5005 aa8.7□□□□□ -1.02
CKAP4-202ENST00000552828 TRAV14DV4A0A0A6YYC5 116 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms