RNA–Protein interactions for RNA: ENST00000552608.6

LINC00661-206, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 1,130 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-206ENST00000552608 FOXE3Q13461 319 aa8.52□□□□□ -1.05
LINC00661-206ENST00000552608 PEA15Q15121 130 aa8.52□□□□□ -1.05
LINC00661-206ENST00000552608 ZNF726P1Q15940 193 aa8.52□□□□□ -1.05
LINC00661-206ENST00000552608 TMEM95Q3KNT9 176 aa8.52□□□□□ -1.05
LINC00661-206ENST00000552608 KHDC3LQ587J8 217 aa8.52□□□□□ -1.05
LINC00661-206ENST00000552608 GCSAMLQ5JQS6 135 aa8.52□□□□□ -1.05
LINC00661-206ENST00000552608 CLEC19AQ6UXS0 136 aa8.52□□□□□ -1.05
LINC00661-206ENST00000552608 ZNF600Q6ZNG1 722 aa8.52□□□□□ -1.05
LINC00661-206ENST00000552608 IQCF2Q8IXL9 164 aa8.52□□□□□ -1.05
LINC00661-206ENST00000552608 OR1B1Q8NGR6 318 aa8.52□□□□□ -1.05
LINC00661-206ENST00000552608 FAM210AQ96ND0 272 aa8.52□□□□□ -1.05
LINC00661-206ENST00000552608 CITED4Q96RK1 184 aa8.52□□□□□ -1.05
LINC00661-206ENST00000552608 EIF5A2Q9GZV4 153 aaKnown RBP8.52□□□□□ -1.05
LINC00661-206ENST00000552608 SMDT1Q9H4I9 107 aa8.52□□□□□ -1.05
LINC00661-206ENST00000552608 GSX1Q9H4S2 264 aaPredicted RBP8.52□□□□□ -1.05
LINC00661-206ENST00000552608 GNB4Q9HAV0 340 aa8.52□□□□□ -1.05
LINC00661-206ENST00000552608 DOK5Q9P104 306 aa8.52□□□□□ -1.05
LINC00661-206ENST00000552608 HIGD1AQ9Y241 93 aa8.52□□□□□ -1.05
LINC00661-206ENST00000552608 VPS13CQ709C8 3753 aa8.52□□□□□ -1.05
LINC00661-206ENST00000552608 INAFM1C9JVW0 142 aa8.51□□□□□ -1.05
LINC00661-206ENST00000552608 TCF21O43680 179 aa8.51□□□□□ -1.05
LINC00661-206ENST00000552608 OR2C1O95371 312 aa8.51□□□□□ -1.05
LINC00661-206ENST00000552608 IGKV1-17P01599 117 aa8.51□□□□□ -1.05
LINC00661-206ENST00000552608 IL4P05112 153 aa8.51□□□□□ -1.05
LINC00661-206ENST00000552608 CLEC3BP05452 202 aa8.51□□□□□ -1.05
LINC00661-206ENST00000552608 CTSGP08311 255 aa8.51□□□□□ -1.05
LINC00661-206ENST00000552608 C8orf88P0DMB2 117 aa8.51□□□□□ -1.05
LINC00661-206ENST00000552608 PSMB8P28062 276 aa8.51□□□□□ -1.05
LINC00661-206ENST00000552608 PMS2P11Q13670 270 aa8.51□□□□□ -1.05
LINC00661-206ENST00000552608 GUK1Q16774 197 aa8.51□□□□□ -1.05
LINC00661-206ENST00000552608 PQLC2Q6ZP29 291 aa8.51□□□□□ -1.05
LINC00661-206ENST00000552608 Q6ZSV7 163 aa8.51□□□□□ -1.05
LINC00661-206ENST00000552608 STXBP6Q8NFX7 210 aa8.51□□□□□ -1.05
LINC00661-206ENST00000552608 RNF125Q96EQ8 232 aa8.51□□□□□ -1.05
LINC00661-206ENST00000552608 SEPSECSQ9HD40 501 aaKnown RBP8.51□□□□□ -1.05
LINC00661-206ENST00000552608 ESM1Q9NQ30 184 aa8.51□□□□□ -1.05
LINC00661-206ENST00000552608 MANBALQ9NQG1 85 aa8.51□□□□□ -1.05
LINC00661-206ENST00000552608 FLNAP21333 2647 aaKnown RBP8.51□□□□□ -1.05
LINC00661-206ENST00000552608 WI2-2373I1.2A0A1W2PRP0 233 aa8.5□□□□□ -1.05
LINC00661-206ENST00000552608 ANKRD34BA5PLL1 514 aa8.5□□□□□ -1.05
LINC00661-206ENST00000552608 RBFOX3A6NFN3 312 aa8.5□□□□□ -1.05
LINC00661-206ENST00000552608 F8W735 103 aaPredicted RBP8.5□□□□□ -1.05
LINC00661-206ENST00000552608 BMPR1BO00238 502 aa8.5□□□□□ -1.05
LINC00661-206ENST00000552608 CRLF1O75462 422 aa8.5□□□□□ -1.05
LINC00661-206ENST00000552608 ARL3P36405 182 aa8.5□□□□□ -1.05
LINC00661-206ENST00000552608 FGF8P55075 233 aaPredicted RBP8.5□□□□□ -1.05
LINC00661-206ENST00000552608 TOR2AQ5JU69 321 aa8.5□□□□□ -1.05
LINC00661-206ENST00000552608 Q71RC1 249 aaPredicted RBP8.5□□□□□ -1.05
LINC00661-206ENST00000552608 SSX7Q7RTT5 188 aa8.5□□□□□ -1.05
LINC00661-206ENST00000552608 LINC00305Q7Z4B0 112 aa8.5□□□□□ -1.05
LINC00661-206ENST00000552608 ZNF329Q86UD4 541 aa8.5□□□□□ -1.05
LINC00661-206ENST00000552608 OR4X2Q8NGF9 303 aa8.5□□□□□ -1.05
LINC00661-206ENST00000552608 TMEM37Q8WXS4 190 aa8.5□□□□□ -1.05
LINC00661-206ENST00000552608 CCDC140Q96MF4 163 aa8.5□□□□□ -1.05
LINC00661-206ENST00000552608 C16orf95Q9H693 158 aa8.5□□□□□ -1.05
LINC00661-206ENST00000552608 TREM1Q9NP99 234 aa8.5□□□□□ -1.05
LINC00661-206ENST00000552608 TMEM167BQ9NRX6 74 aa8.5□□□□□ -1.05
LINC00661-206ENST00000552608 MYO9AB2RTY4 2548 aa8.49□□□□□ -1.05
LINC00661-206ENST00000552608 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.49□□□□□ -1.05
LINC00661-206ENST00000552608 HMGB3O15347 200 aaKnown RBP8.49□□□□□ -1.05
LINC00661-206ENST00000552608 OR7C2O60412 319 aa8.49□□□□□ -1.05
LINC00661-206ENST00000552608 ARL14EPLP0DKL9 152 aa8.49□□□□□ -1.05
LINC00661-206ENST00000552608 SPATA31B1PQ5VZV4 182 aa8.49□□□□□ -1.05
LINC00661-206ENST00000552608 ZNF343Q6P1L6 599 aa8.49□□□□□ -1.05
LINC00661-206ENST00000552608 PATE2Q6UY27 113 aa8.49□□□□□ -1.05
LINC00661-206ENST00000552608 MIR17HGQ75NE6 70 aa8.49□□□□□ -1.05
LINC00661-206ENST00000552608 ZNF491Q8N8L2 437 aa8.49□□□□□ -1.05
LINC00661-206ENST00000552608 TXNDC17Q9BRA2 123 aa8.49□□□□□ -1.05
LINC00661-206ENST00000552608 CHRDL1Q9BU40 450 aa8.49□□□□□ -1.05
LINC00661-206ENST00000552608 SERTAD4Q9NUC0 356 aa8.49□□□□□ -1.05
LINC00661-206ENST00000552608 MRPL27Q9P0M9 148 aaKnown RBP8.49□□□□□ -1.05
LINC00661-206ENST00000552608 GNG13Q9P2W3 67 aa8.49□□□□□ -1.05
LINC00661-206ENST00000552608 RABAC1Q9UI14 185 aa8.49□□□□□ -1.05
LINC00661-206ENST00000552608 PUS1Q9Y606 427 aaKnown RBP eCLIP8.49□□□□□ -1.05
LINC00661-206ENST00000552608 ITPR2Q14571 2701 aa8.48□□□□□ -1.05
LINC00661-206ENST00000552608 KRBOX1C9JBD0 128 aa8.48□□□□□ -1.05
LINC00661-206ENST00000552608 I3L521 148 aa8.48□□□□□ -1.05
LINC00661-206ENST00000552608 GGCTO75223 188 aaKnown RBP8.48□□□□□ -1.05
LINC00661-206ENST00000552608 NDUFA7O95182 113 aa8.48□□□□□ -1.05
LINC00661-206ENST00000552608 IGHV3-11P01762 117 aa8.48□□□□□ -1.05
LINC00661-206ENST00000552608 BCL2P10415 239 aa8.48□□□□□ -1.05
LINC00661-206ENST00000552608 ADMP35318 185 aa8.48□□□□□ -1.05
LINC00661-206ENST00000552608 CCL20P78556 96 aa8.48□□□□□ -1.05
LINC00661-206ENST00000552608 HAGHQ16775 308 aa8.48□□□□□ -1.05
LINC00661-206ENST00000552608 ZNF506Q5JVG8 444 aa8.48□□□□□ -1.05
LINC00661-206ENST00000552608 KLHDC1Q8N7A1 406 aa8.48□□□□□ -1.05
LINC00661-206ENST00000552608 RNF152Q8N8N0 203 aa8.48□□□□□ -1.05
LINC00661-206ENST00000552608 OR5AU1Q8NGC0 362 aa8.48□□□□□ -1.05
LINC00661-206ENST00000552608 NARS2Q96I59 477 aaKnown RBP8.48□□□□□ -1.05
LINC00661-206ENST00000552608 UBE2E2Q96LR5 201 aa8.48□□□□□ -1.05
LINC00661-206ENST00000552608 SLC25A39Q9BZJ4 359 aaPredicted RBP8.48□□□□□ -1.05
LINC00661-206ENST00000552608 KLK15Q9H2R5 256 aa8.48□□□□□ -1.05
LINC00661-206ENST00000552608 OR51M1Q9H341 326 aa8.48□□□□□ -1.05
LINC00661-206ENST00000552608 PEF1Q9UBV8 284 aaKnown RBP8.48□□□□□ -1.05
LINC00661-206ENST00000552608 CSMD1Q96PZ7 3565 aa8.47□□□□□ -1.05
LINC00661-206ENST00000552608 LOC102723971A0A1B0GUV8 181 aa8.47□□□□□ -1.05
LINC00661-206ENST00000552608 H3BRN7 92 aa8.47□□□□□ -1.05
LINC00661-206ENST00000552608 NDUFA4O00483 81 aa8.47□□□□□ -1.05
LINC00661-206ENST00000552608 NDUFS6O75380 124 aaKnown RBP8.47□□□□□ -1.05
LINC00661-206ENST00000552608 RPLP1P05386 114 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms