RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	SEC22C	Q9BRL7	303 aa		5.02	□□□□□ -1.61
CNOT2-238	ENST00000552422	MARVELD1	Q9BSK0	173 aa		5.02	□□□□□ -1.61
CNOT2-238	ENST00000552422	DAZ1	Q9NQZ3	744 aa	Known RBP	5.02	□□□□□ -1.61
CNOT2-238	ENST00000552422	MRPL36	Q9P0J6	103 aa	Known RBP	5.02	□□□□□ -1.61
CNOT2-238	ENST00000552422	ZNF256	Q9Y2P7	627 aa	Predicted RBP	5.02	□□□□□ -1.61
CNOT2-238	ENST00000552422	HUWE1	Q7Z6Z7	4374 aa	Known RBP	5.01	□□□□□ -1.61
CNOT2-238	ENST00000552422	RPS10-NUDT3	A0A1W2PQS6	291 aa		5.01	□□□□□ -1.61
CNOT2-238	ENST00000552422	ZNF320	A2RRD8	509 aa		5.01	□□□□□ -1.61
CNOT2-238	ENST00000552422		K7EIL1	84 aa		5.01	□□□□□ -1.61
CNOT2-238	ENST00000552422	PRAF2	O60831	178 aa		5.01	□□□□□ -1.61
CNOT2-238	ENST00000552422	CLN5	O75503	358 aa		5.01	□□□□□ -1.61
CNOT2-238	ENST00000552422	C8orf88	P0DMB2	117 aa		5.01	□□□□□ -1.61
CNOT2-238	ENST00000552422	IAPP	P10997	89 aa		5.01	□□□□□ -1.61
CNOT2-238	ENST00000552422	SLC25A4	P12235	298 aa		5.01	□□□□□ -1.61
CNOT2-238	ENST00000552422	FOLR2	P14207	255 aa		5.01	□□□□□ -1.61
CNOT2-238	ENST00000552422	SPN	P16150	400 aa		5.01	□□□□□ -1.61
CNOT2-238	ENST00000552422	EDN2	P20800	178 aa		5.01	□□□□□ -1.61
CNOT2-238	ENST00000552422	CBLN1	P23435	193 aa		5.01	□□□□□ -1.61
CNOT2-238	ENST00000552422	NKX2-1	P43699	371 aa	Predicted RBP	5.01	□□□□□ -1.61
CNOT2-238	ENST00000552422	NPBWR1	P48145	328 aa		5.01	□□□□□ -1.61
CNOT2-238	ENST00000552422	RND2	P52198	227 aa		5.01	□□□□□ -1.61
CNOT2-238	ENST00000552422	IAH1	Q2TAA2	248 aa	Predicted RBP	5.01	□□□□□ -1.61
CNOT2-238	ENST00000552422	LCN12	Q6JVE5	192 aa		5.01	□□□□□ -1.61
CNOT2-238	ENST00000552422	PRSS54	Q6PEW0	395 aa		5.01	□□□□□ -1.61
CNOT2-238	ENST00000552422	HAPLN4	Q86UW8	402 aa		5.01	□□□□□ -1.61
CNOT2-238	ENST00000552422	C12orf45	Q8N5I9	185 aa	Predicted RBP	5.01	□□□□□ -1.61
CNOT2-238	ENST00000552422	OR2K2	Q8NGT1	345 aa		5.01	□□□□□ -1.61
CNOT2-238	ENST00000552422	CACNG8	Q8WXS5	425 aa		5.01	□□□□□ -1.61
CNOT2-238	ENST00000552422	MAGT1	Q9H0U3	335 aa		5.01	□□□□□ -1.61
CNOT2-238	ENST00000552422	GPN1	Q9HCN4	374 aa	Predicted RBP	5.01	□□□□□ -1.61
CNOT2-238	ENST00000552422	PALMD	Q9NP74	551 aa		5.01	□□□□□ -1.61
CNOT2-238	ENST00000552422	TECR	Q9NZ01	308 aa	Known RBP	5.01	□□□□□ -1.61
CNOT2-238	ENST00000552422	RCL1	Q9Y2P8	373 aa	Known RBP	5.01	□□□□□ -1.61
CNOT2-238	ENST00000552422	UFC1	Q9Y3C8	167 aa		5.01	□□□□□ -1.61
CNOT2-238	ENST00000552422	TRAV30	A0A087WSZ9	112 aa		5	□□□□□ -1.61
CNOT2-238	ENST00000552422	IZUMO1R	A6ND01	250 aa		5	□□□□□ -1.61
CNOT2-238	ENST00000552422	SNRPGP15	A8MWD9	76 aa		5	□□□□□ -1.61
CNOT2-238	ENST00000552422	PRSS46	E5RG02	174 aa		5	□□□□□ -1.61
CNOT2-238	ENST00000552422	INMT-MINDY4	F8WBC2	141 aa		5	□□□□□ -1.61
CNOT2-238	ENST00000552422		K7EMT4	169 aa		5	□□□□□ -1.61
CNOT2-238	ENST00000552422	WRB	O00258	174 aa		5	□□□□□ -1.61
CNOT2-238	ENST00000552422	CCS	O14618	274 aa		5	□□□□□ -1.61
CNOT2-238	ENST00000552422	SSSCA1	O60232	199 aa		5	□□□□□ -1.61
CNOT2-238	ENST00000552422	SCGB2A1	O75556	95 aa		5	□□□□□ -1.61
CNOT2-238	ENST00000552422	TMEM50A	O95807	157 aa		5	□□□□□ -1.61
CNOT2-238	ENST00000552422	PTTG1	O95997	202 aa		5	□□□□□ -1.61
CNOT2-238	ENST00000552422	IGKV1-17	P01599	117 aa		5	□□□□□ -1.61
CNOT2-238	ENST00000552422	IFNA4	P05014	189 aa		5	□□□□□ -1.61
CNOT2-238	ENST00000552422	IGLC1	P0CG04	106 aa		5	□□□□□ -1.61
CNOT2-238	ENST00000552422	POLR2G	P62487	172 aa	Known RBP eCLIP	5	□□□□□ -1.61
CNOT2-238	ENST00000552422	RAB11A	P62491	216 aa		5	□□□□□ -1.61
CNOT2-238	ENST00000552422	DCTN2	Q13561	401 aa	Known RBP	5	□□□□□ -1.61
CNOT2-238	ENST00000552422	ETFRF1	Q6IPR1	90 aa		5	□□□□□ -1.61
CNOT2-238	ENST00000552422	SLC16A13	Q7RTY0	426 aa		5	□□□□□ -1.61
CNOT2-238	ENST00000552422	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	5	□□□□□ -1.61
CNOT2-238	ENST00000552422	UXS1	Q8NBZ7	420 aa		5	□□□□□ -1.61
CNOT2-238	ENST00000552422	MRAP	Q8TCY5	172 aa		5	□□□□□ -1.61
CNOT2-238	ENST00000552422	MARC2	Q969Z3	335 aa		5	□□□□□ -1.61
CNOT2-238	ENST00000552422	PRR25	Q96S07	402 aa		5	□□□□□ -1.61
CNOT2-238	ENST00000552422	C20orf24	Q9BUV8	137 aa		5	□□□□□ -1.61
CNOT2-238	ENST00000552422	MRPL27	Q9P0M9	148 aa	Known RBP	5	□□□□□ -1.61
CNOT2-238	ENST00000552422	MLX	Q9UH92	298 aa		5	□□□□□ -1.61
CNOT2-238	ENST00000552422	IGHV3OR16-8	A0A075B7F1	116 aa		4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	C5orf51	A6NDU8	294 aa		4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	FAM25E	A8MYX2	175 aa		4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422		H3BP45	60 aa		4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	SCGB1D2	O95969	90 aa		4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	MBP	P02686	304 aa	Predicted RBP	4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	NHLRC4	P0CG21	123 aa	Predicted RBP	4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	GP9	P14770	177 aa		4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	OR10J1	P30954	320 aa		4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	GPX4	P36969	197 aa	Predicted RBP	4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	PAX9	P55771	341 aa		4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	TAS2R30	P59541	319 aa		4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	RPP30	P78346	268 aa	Known RBP	4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	IL15RA	Q13261	267 aa		4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	GAMT	Q14353	236 aa		4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	DEFB114	Q30KQ6	69 aa		4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	SPANXN5	Q5MJ07	72 aa		4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	BTNL8	Q6UX41	500 aa		4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	ZNF600	Q6ZNG1	722 aa		4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	TMEM61	Q8N0U2	210 aa		4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	OR1S2	Q8NGQ3	325 aa		4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	DYNLRB2	Q8TF09	96 aa		4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	NPIPB3	Q92617	1050 aa		4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	ACY3	Q96HD9	319 aa		4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	SMIM8	Q96KF7	97 aa		4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	C2orf50	Q96LR7	162 aa		4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	RAB40C	Q96S21	281 aa		4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	GINS3	Q9BRX5	216 aa		4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	GSKIP	Q9P0R6	139 aa		4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	STRAP	Q9Y3F4	350 aa	Known RBP	4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	LSM4	Q9Y4Z0	139 aa	Known RBP	4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	PUS1	Q9Y606	427 aa	Known RBP eCLIP	4.99	□□□□□ -1.61
CNOT2-238	ENST00000552422	IGKV1D-37	A0A075B6S9	117 aa		4.98	□□□□□ -1.61
CNOT2-238	ENST00000552422	IGKV1OR2-108	A0A075B7D4	117 aa		4.98	□□□□□ -1.61
CNOT2-238	ENST00000552422	IGHV7-4-1	A0A0J9YVY3	117 aa		4.98	□□□□□ -1.61
CNOT2-238	ENST00000552422	C7orf66	A4D0T2	115 aa		4.98	□□□□□ -1.61
CNOT2-238	ENST00000552422	PMS2P5	A8MQ11	134 aa		4.98	□□□□□ -1.61
CNOT2-238	ENST00000552422		K7EPK0	472 aa		4.98	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms