RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 PRSS46E5RG02 174 aa7.99□□□□□ -1.13
PTCH1-225ENST00000551845 TSPAN4O14817 238 aa7.99□□□□□ -1.13
PTCH1-225ENST00000551845 CFDP00746 253 aaPredicted RBP7.99□□□□□ -1.13
PTCH1-225ENST00000551845 IL4P05112 153 aa7.99□□□□□ -1.13
PTCH1-225ENST00000551845 CRYBB3P26998 211 aa7.99□□□□□ -1.13
PTCH1-225ENST00000551845 CAV2P51636 162 aa7.99□□□□□ -1.13
PTCH1-225ENST00000551845 PAFAH1B2P68402 229 aa7.99□□□□□ -1.13
PTCH1-225ENST00000551845 AKR1C1Q04828 323 aa7.99□□□□□ -1.13
PTCH1-225ENST00000551845 RAB32Q13637 225 aa7.99□□□□□ -1.13
PTCH1-225ENST00000551845 RGS21Q2M5E4 152 aa7.99□□□□□ -1.13
PTCH1-225ENST00000551845 TMEM144Q7Z5S9 345 aa7.99□□□□□ -1.13
PTCH1-225ENST00000551845 GRAMD2BQ96HH9 432 aa7.99□□□□□ -1.13
PTCH1-225ENST00000551845 RNF2Q99496 336 aa7.99□□□□□ -1.13
PTCH1-225ENST00000551845 TRGV9Q99603 122 aa7.99□□□□□ -1.13
PTCH1-225ENST00000551845 SPAG8Q99932 426 aaPredicted RBP7.99□□□□□ -1.13
PTCH1-225ENST00000551845 DNAH3Q8TD57 4116 aa7.99□□□□□ -1.13
PTCH1-225ENST00000551845 IGKV1D-37A0A075B6S9 117 aa7.98□□□□□ -1.13
PTCH1-225ENST00000551845 FAM24AA6NFZ4 105 aa7.98□□□□□ -1.13
PTCH1-225ENST00000551845 FNDC10F2Z333 226 aa7.98□□□□□ -1.13
PTCH1-225ENST00000551845 DEDDO75618 318 aa7.98□□□□□ -1.13
PTCH1-225ENST00000551845 APOHP02749 345 aaPredicted RBP7.98□□□□□ -1.13
PTCH1-225ENST00000551845 HNRNPCP07910 306 aaKnown RBP eCLIP7.98□□□□□ -1.13
PTCH1-225ENST00000551845 CMC4P56277 68 aaPredicted RBP7.98□□□□□ -1.13
PTCH1-225ENST00000551845 CD81P60033 236 aa7.98□□□□□ -1.13
PTCH1-225ENST00000551845 RPL11P62913 178 aaKnown RBP7.98□□□□□ -1.13
PTCH1-225ENST00000551845 DLK1P80370 383 aa7.98□□□□□ -1.13
PTCH1-225ENST00000551845 ZNF90Q03938 601 aa7.98□□□□□ -1.13
PTCH1-225ENST00000551845 ACOT7LQ6ZUV0 252 aa7.98□□□□□ -1.13
PTCH1-225ENST00000551845 THAP8Q8NA92 274 aa7.98□□□□□ -1.13
PTCH1-225ENST00000551845 NEURL2Q9BR09 285 aa7.98□□□□□ -1.13
PTCH1-225ENST00000551845 GGACTQ9BVM4 153 aa7.98□□□□□ -1.13
PTCH1-225ENST00000551845 VSIRQ9H7M9 311 aa7.98□□□□□ -1.13
PTCH1-225ENST00000551845 TUBA4BQ9H853 241 aa7.98□□□□□ -1.13
PTCH1-225ENST00000551845 MGAT4CQ9UBM8 478 aa7.98□□□□□ -1.13
PTCH1-225ENST00000551845 IGHV3-66A0A0C4DH42 116 aa7.97□□□□□ -1.13
PTCH1-225ENST00000551845 OR4C46A6NHA9 309 aa7.97□□□□□ -1.13
PTCH1-225ENST00000551845 A8MZ25 164 aa7.97□□□□□ -1.13
PTCH1-225ENST00000551845 E5RGE8 158 aa7.97□□□□□ -1.13
PTCH1-225ENST00000551845 J3QL48 77 aa7.97□□□□□ -1.13
PTCH1-225ENST00000551845 DFFBO76075 338 aa7.97□□□□□ -1.13
PTCH1-225ENST00000551845 CD7P09564 240 aa7.97□□□□□ -1.13
PTCH1-225ENST00000551845 S100A11P31949 105 aa7.97□□□□□ -1.13
PTCH1-225ENST00000551845 EIF2B2P49770 351 aaKnown RBP7.97□□□□□ -1.13
PTCH1-225ENST00000551845 AP2S1P53680 142 aaPredicted RBP7.97□□□□□ -1.13
PTCH1-225ENST00000551845 RRAS2P62070 204 aaPredicted RBP7.97□□□□□ -1.13
PTCH1-225ENST00000551845 OR2F1Q13607 317 aa7.97□□□□□ -1.13
PTCH1-225ENST00000551845 TCF24Q7RTU0 167 aa7.97□□□□□ -1.13
PTCH1-225ENST00000551845 LILRB2Q8N423 598 aa7.97□□□□□ -1.13
PTCH1-225ENST00000551845 TMEM252Q8N6L7 170 aa7.97□□□□□ -1.13
PTCH1-225ENST00000551845 ST8SIA2Q92186 375 aa7.97□□□□□ -1.13
PTCH1-225ENST00000551845 RNF125Q96EQ8 232 aa7.97□□□□□ -1.13
PTCH1-225ENST00000551845 B9D2Q9BPU9 175 aa7.97□□□□□ -1.13
PTCH1-225ENST00000551845 PBDC1Q9BVG4 233 aa7.97□□□□□ -1.13
PTCH1-225ENST00000551845 MED28Q9H204 178 aa7.97□□□□□ -1.13
PTCH1-225ENST00000551845 LYRM2Q9NU23 88 aaPredicted RBP7.97□□□□□ -1.13
PTCH1-225ENST00000551845 RABAC1Q9UI14 185 aa7.97□□□□□ -1.13
PTCH1-225ENST00000551845 ALG5Q9Y673 324 aa7.97□□□□□ -1.13
PTCH1-225ENST00000551845 IGKV3-7A0A075B6H7 116 aa7.96□□□□□ -1.14
PTCH1-225ENST00000551845 IGKV1OR2-108A0A075B7D4 117 aa7.96□□□□□ -1.14
PTCH1-225ENST00000551845 HELTA6NFD8 242 aa7.96□□□□□ -1.14
PTCH1-225ENST00000551845 OR11H12B2RN74 326 aa7.96□□□□□ -1.14
PTCH1-225ENST00000551845 DNASE2O00115 360 aaPredicted RBP7.96□□□□□ -1.14
PTCH1-225ENST00000551845 CCNKO75909 580 aa7.96□□□□□ -1.14
PTCH1-225ENST00000551845 CST7O76096 145 aa7.96□□□□□ -1.14
PTCH1-225ENST00000551845 IGHV4-30-4P0DP06 118 aa7.96□□□□□ -1.14
PTCH1-225ENST00000551845 S100A7P31151 101 aa7.96□□□□□ -1.14
PTCH1-225ENST00000551845 SULT1A1P50225 295 aa7.96□□□□□ -1.14
PTCH1-225ENST00000551845 H2BFSP57053 126 aa7.96□□□□□ -1.14
PTCH1-225ENST00000551845 ARL16Q0P5N6 197 aa7.96□□□□□ -1.14
PTCH1-225ENST00000551845 USF2Q15853 346 aaPredicted RBP7.96□□□□□ -1.14
PTCH1-225ENST00000551845 ATP6V1FQ16864 119 aa7.96□□□□□ -1.14
PTCH1-225ENST00000551845 LRRC37A5PQ49AS3 106 aa7.96□□□□□ -1.14
PTCH1-225ENST00000551845 FAM90A2PQ658T7 463 aa7.96□□□□□ -1.14
PTCH1-225ENST00000551845 TEPPQ6URK8 271 aa7.96□□□□□ -1.14
PTCH1-225ENST00000551845 STX12Q86Y82 276 aa7.96□□□□□ -1.14
PTCH1-225ENST00000551845 TMEM217Q8N7C4 229 aa7.96□□□□□ -1.14
PTCH1-225ENST00000551845 BPIFCQ8NFQ6 507 aa7.96□□□□□ -1.14
PTCH1-225ENST00000551845 PPP1R1CQ8WVI7 109 aa7.96□□□□□ -1.14
PTCH1-225ENST00000551845 SLC25A31Q9H0C2 315 aa7.96□□□□□ -1.14
PTCH1-225ENST00000551845 C11orf1Q9H5F2 150 aa7.96□□□□□ -1.14
PTCH1-225ENST00000551845 U3KQE9 123 aa7.96□□□□□ -1.14
PTCH1-225ENST00000551845 BUB3O43684 328 aa7.95□□□□□ -1.14
PTCH1-225ENST00000551845 FRMD6-AS1P0C7T7 363 aa7.95□□□□□ -1.14
PTCH1-225ENST00000551845 NHLRC4P0CG21 123 aaPredicted RBP7.95□□□□□ -1.14
PTCH1-225ENST00000551845 PET100P0DJ07 73 aa7.95□□□□□ -1.14
PTCH1-225ENST00000551845 NUP62P37198 522 aaPredicted RBP7.95□□□□□ -1.14
PTCH1-225ENST00000551845 P2RY1P47900 373 aa7.95□□□□□ -1.14
PTCH1-225ENST00000551845 TFPI2P48307 235 aa7.95□□□□□ -1.14
PTCH1-225ENST00000551845 LYZP61626 148 aa7.95□□□□□ -1.14
PTCH1-225ENST00000551845 SELENOTP62341 195 aa7.95□□□□□ -1.14
PTCH1-225ENST00000551845 HBG1P69891 147 aa7.95□□□□□ -1.14
PTCH1-225ENST00000551845 HBG2P69892 147 aa7.95□□□□□ -1.14
PTCH1-225ENST00000551845 RAB31Q13636 194 aa7.95□□□□□ -1.14
PTCH1-225ENST00000551845 OXA1LQ15070 435 aa7.95□□□□□ -1.14
PTCH1-225ENST00000551845 C16orf54Q6UWD8 224 aa7.95□□□□□ -1.14
PTCH1-225ENST00000551845 CYP2G1PQ6ZSU1 146 aa7.95□□□□□ -1.14
PTCH1-225ENST00000551845 WFDC3Q8IUB2 231 aa7.95□□□□□ -1.14
PTCH1-225ENST00000551845 GBGT1Q8N5D6 347 aa7.95□□□□□ -1.14
PTCH1-225ENST00000551845 PPP1R14BQ96C90 147 aa7.95□□□□□ -1.14
PTCH1-225ENST00000551845 C19orf73Q9NVV2 129 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms