RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 IL4P05112 153 aa12.25□□□□□ -0.45
CHMP1A-209ENST00000550872 PET100P0DJ07 73 aa12.25□□□□□ -0.45
CHMP1A-209ENST00000550872 BMI1P35226 326 aa12.25□□□□□ -0.45
CHMP1A-209ENST00000550872 P2RY1P47900 373 aa12.25□□□□□ -0.45
CHMP1A-209ENST00000550872 SULT1A1P50225 295 aa12.25□□□□□ -0.45
CHMP1A-209ENST00000550872 SLC38A11Q08AI6 406 aa12.25□□□□□ -0.45
CHMP1A-209ENST00000550872 OR2F1Q13607 317 aa12.25□□□□□ -0.45
CHMP1A-209ENST00000550872 GUCA2BQ16661 112 aa12.25□□□□□ -0.45
CHMP1A-209ENST00000550872 STX12Q86Y82 276 aa12.25□□□□□ -0.45
CHMP1A-209ENST00000550872 OR51G1Q8NGK1 321 aa12.25□□□□□ -0.45
CHMP1A-209ENST00000550872 METTL26Q96S19 204 aa12.25□□□□□ -0.45
CHMP1A-209ENST00000550872 RNF126Q9BV68 326 aa12.25□□□□□ -0.45
CHMP1A-209ENST00000550872 GGACTQ9BVM4 153 aa12.25□□□□□ -0.45
CHMP1A-209ENST00000550872 SLC25A31Q9H0C2 315 aa12.25□□□□□ -0.45
CHMP1A-209ENST00000550872 NPVFQ9HCQ7 196 aa12.25□□□□□ -0.45
CHMP1A-209ENST00000550872 K7EIL1 84 aa12.24□□□□□ -0.45
CHMP1A-209ENST00000550872 CHEK1O14757 476 aa12.24□□□□□ -0.45
CHMP1A-209ENST00000550872 RBPMS2Q6ZRY4 209 aaKnown RBP12.24□□□□□ -0.45
CHMP1A-209ENST00000550872 TMEM61Q8N0U2 210 aa12.24□□□□□ -0.45
CHMP1A-209ENST00000550872 MRAPQ8TCY5 172 aa12.24□□□□□ -0.45
CHMP1A-209ENST00000550872 TRAV25A0A0B4J276 109 aa12.23□□□□□ -0.45
CHMP1A-209ENST00000550872 IGHV3-66A0A0C4DH42 116 aa12.23□□□□□ -0.45
CHMP1A-209ENST00000550872 A0A1W2PS18 150 aa12.23□□□□□ -0.45
CHMP1A-209ENST00000550872 ZNF785A8K8V0 405 aa12.23□□□□□ -0.45
CHMP1A-209ENST00000550872 APOHP02749 345 aaPredicted RBP12.23□□□□□ -0.45
CHMP1A-209ENST00000550872 CRYBB3P26998 211 aa12.23□□□□□ -0.45
CHMP1A-209ENST00000550872 S100A11P31949 105 aa12.23□□□□□ -0.45
CHMP1A-209ENST00000550872 HBG1P69891 147 aa12.23□□□□□ -0.45
CHMP1A-209ENST00000550872 HBG2P69892 147 aa12.23□□□□□ -0.45
CHMP1A-209ENST00000550872 USF2Q15853 346 aaPredicted RBP12.23□□□□□ -0.45
CHMP1A-209ENST00000550872 DEFB121Q5J5C9 76 aa12.23□□□□□ -0.45
CHMP1A-209ENST00000550872 LAMTOR1Q6IAA8 161 aa12.23□□□□□ -0.45
CHMP1A-209ENST00000550872 LILRB2Q8N423 598 aa12.23□□□□□ -0.45
CHMP1A-209ENST00000550872 ST8SIA2Q92186 375 aa12.23□□□□□ -0.45
CHMP1A-209ENST00000550872 RNF125Q96EQ8 232 aa12.23□□□□□ -0.45
CHMP1A-209ENST00000550872 NARS2Q96I59 477 aaKnown RBP12.23□□□□□ -0.45
CHMP1A-209ENST00000550872 PBDC1Q9BVG4 233 aa12.23□□□□□ -0.45
CHMP1A-209ENST00000550872 HNRNPCP07910 306 aaKnown RBP eCLIP12.22□□□□□ -0.45
CHMP1A-209ENST00000550872 LYZP61626 148 aa12.22□□□□□ -0.45
CHMP1A-209ENST00000550872 NHLH2Q02577 135 aa12.22□□□□□ -0.45
CHMP1A-209ENST00000550872 TEPPQ6URK8 271 aa12.22□□□□□ -0.45
CHMP1A-209ENST00000550872 CYP2G1PQ6ZSU1 146 aa12.22□□□□□ -0.45
CHMP1A-209ENST00000550872 BPIFCQ8NFQ6 507 aa12.22□□□□□ -0.45
CHMP1A-209ENST00000550872 THAP6Q8TBB0 222 aa12.22□□□□□ -0.45
CHMP1A-209ENST00000550872 RNF2Q99496 336 aa12.22□□□□□ -0.45
CHMP1A-209ENST00000550872 TMEM231Q9H6L2 316 aa12.22□□□□□ -0.45
CHMP1A-209ENST00000550872 VSIRQ9H7M9 311 aa12.22□□□□□ -0.45
CHMP1A-209ENST00000550872 MBD2Q9UBB5 411 aa12.22□□□□□ -0.45
CHMP1A-209ENST00000550872 RABAC1Q9UI14 185 aa12.22□□□□□ -0.45
CHMP1A-209ENST00000550872 CFDP00746 253 aaPredicted RBP12.21□□□□□ -0.45
CHMP1A-209ENST00000550872 GIPP09681 153 aaPredicted RBP12.21□□□□□ -0.45
CHMP1A-209ENST00000550872 GATA2P23769 480 aaPredicted RBP12.21□□□□□ -0.45
CHMP1A-209ENST00000550872 EWSR1Q01844 656 aaKnown RBP eCLIP12.21□□□□□ -0.45
CHMP1A-209ENST00000550872 ATP6V1FQ16864 119 aa12.21□□□□□ -0.45
CHMP1A-209ENST00000550872 TMEM147Q9BVK8 224 aa12.21□□□□□ -0.45
CHMP1A-209ENST00000550872 UQCC1Q9NVA1 299 aa12.21□□□□□ -0.45
CHMP1A-209ENST00000550872 TSPAN4O14817 238 aa12.2□□□□□ -0.46
CHMP1A-209ENST00000550872 RAP2BP61225 183 aa12.2□□□□□ -0.46
CHMP1A-209ENST00000550872 TMEM182Q6ZP80 229 aaPredicted RBP12.2□□□□□ -0.46
CHMP1A-209ENST00000550872 TCF24Q7RTU0 167 aa12.2□□□□□ -0.46
CHMP1A-209ENST00000550872 GTSCR1Q86UQ5 136 aa12.2□□□□□ -0.46
CHMP1A-209ENST00000550872 ASB13Q8WXK3 278 aa12.2□□□□□ -0.46
CHMP1A-209ENST00000550872 GRAMD2BQ96HH9 432 aa12.2□□□□□ -0.46
CHMP1A-209ENST00000550872 PFDN2Q9UHV9 154 aa12.2□□□□□ -0.46
CHMP1A-209ENST00000550872 U3KQE9 123 aa12.2□□□□□ -0.46
CHMP1A-209ENST00000550872 IGKV3-7A0A075B6H7 116 aa12.19□□□□□ -0.46
CHMP1A-209ENST00000550872 DFFBO76075 338 aa12.19□□□□□ -0.46
CHMP1A-209ENST00000550872 CD5P06127 495 aa12.19□□□□□ -0.46
CHMP1A-209ENST00000550872 RPL12P30050 165 aaKnown RBP12.19□□□□□ -0.46
CHMP1A-209ENST00000550872 EIF2B2P49770 351 aaKnown RBP12.19□□□□□ -0.46
CHMP1A-209ENST00000550872 SELENOTP62341 195 aa12.19□□□□□ -0.46
CHMP1A-209ENST00000550872 BAXQ07812 192 aa12.19□□□□□ -0.46
CHMP1A-209ENST00000550872 FGL1Q08830 312 aa12.19□□□□□ -0.46
CHMP1A-209ENST00000550872 RAB31Q13636 194 aa12.19□□□□□ -0.46
CHMP1A-209ENST00000550872 OR5C1Q8NGR4 320 aa12.19□□□□□ -0.46
CHMP1A-209ENST00000550872 PPP1R14BQ96C90 147 aa12.19□□□□□ -0.46
CHMP1A-209ENST00000550872 LSM4Q9Y4Z0 139 aaKnown RBP12.19□□□□□ -0.46
CHMP1A-209ENST00000550872 AGPAT2O15120 278 aa12.18□□□□□ -0.46
CHMP1A-209ENST00000550872 LYL1P12980 280 aa12.18□□□□□ -0.46
CHMP1A-209ENST00000550872 ORM2P19652 201 aa12.18□□□□□ -0.46
CHMP1A-209ENST00000550872 RPL11P62913 178 aaKnown RBP12.18□□□□□ -0.46
CHMP1A-209ENST00000550872 CLINT1Q14677 625 aa12.18□□□□□ -0.46
CHMP1A-209ENST00000550872 VWC2Q2TAL6 325 aa12.18□□□□□ -0.46
CHMP1A-209ENST00000550872 FAM90A2PQ658T7 463 aa12.18□□□□□ -0.46
CHMP1A-209ENST00000550872 Q8N1Y9 231 aa12.18□□□□□ -0.46
CHMP1A-209ENST00000550872 SPAG8Q99932 426 aaPredicted RBP12.18□□□□□ -0.46
CHMP1A-209ENST00000550872 WDR83OSQ9Y284 106 aa12.18□□□□□ -0.46
CHMP1A-209ENST00000550872 SMAD5-AS1Q9Y6J3 95 aa12.18□□□□□ -0.46
CHMP1A-209ENST00000550872 UBE2L5PA0A1B0GUS4 154 aa12.17□□□□□ -0.46
CHMP1A-209ENST00000550872 CD7P09564 240 aa12.17□□□□□ -0.46
CHMP1A-209ENST00000550872 LINC00869P0C866 280 aa12.17□□□□□ -0.46
CHMP1A-209ENST00000550872 NUP62P37198 522 aaPredicted RBP12.17□□□□□ -0.46
CHMP1A-209ENST00000550872 CAMLGP49069 296 aa12.17□□□□□ -0.46
CHMP1A-209ENST00000550872 CD81P60033 236 aa12.17□□□□□ -0.46
CHMP1A-209ENST00000550872 Q5BKY6 102 aa12.17□□□□□ -0.46
CHMP1A-209ENST00000550872 C16orf54Q6UWD8 224 aa12.17□□□□□ -0.46
CHMP1A-209ENST00000550872 ZNF546Q86UE3 836 aa12.17□□□□□ -0.46
CHMP1A-209ENST00000550872 OR1B1Q8NGR6 318 aa12.17□□□□□ -0.46
CHMP1A-209ENST00000550872 MGST2Q99735 147 aa12.17□□□□□ -0.46
CHMP1A-209ENST00000550872 NEURL2Q9BR09 285 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms