RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 TTPAP49638 278 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 RAB25P57735 213 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 ACTBP60709 375 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 RAB2AP61019 212 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 BAXQ07812 192 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 PLCXD2Q0VAA5 305 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 ENDOGQ14249 297 aaKnown RBP2.43□□□□□ -2.02
LIMA1-205ENST00000550592 ACTBL2Q562R1 376 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 RNASE10Q5GAN6 216 aaKnown RBP2.43□□□□□ -2.02
LIMA1-205ENST00000550592 LDLRAD2Q5SZI1 272 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 TRIQKQ629K1 86 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 CYHR1Q6ZMK1 362 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 ADM2Q7Z4H4 148 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 ANGPTL5Q86XS5 388 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 SLC35F6Q8N357 371 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 C12orf45Q8N5I9 185 aaPredicted RBP2.43□□□□□ -2.02
LIMA1-205ENST00000550592 ZNF283Q8N7M2 679 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 OR8S1Q8NH09 359 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 CCDC124Q96CT7 223 aaKnown RBP2.43□□□□□ -2.02
LIMA1-205ENST00000550592 ZHX1-C8orf76Q96EF9 292 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 PACRGQ96M98 296 aaPredicted RBP2.43□□□□□ -2.02
LIMA1-205ENST00000550592 OR2V2Q96R30 315 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 EFCAB1Q9HAE3 211 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 SAR1AQ9NR31 198 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 MS4A12Q9NXJ0 267 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 BABAM2Q9NXR7 383 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 MED11Q9P086 117 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 MRM2Q9UI43 246 aaKnown RBP2.43□□□□□ -2.02
LIMA1-205ENST00000550592 GNG8Q9UK08 70 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 VPREB3Q9UKI3 123 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 KIAA2026Q5HYC2 2103 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 A0A087WXM4 84 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 IGHV1-69-2A0A0G2JMI3 117 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 PGPA6NDG6 321 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 H3BQ85 93 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 ISLRO14498 428 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 CDIPTO14735 213 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 GGCTO75223 188 aaKnown RBP2.42□□□□□ -2.02
LIMA1-205ENST00000550592 UGT2B11O75310 529 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 IFNA7P01567 189 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 IL7P13232 177 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 ZNF35P13682 527 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 ZNF25P17030 456 aaPredicted RBP2.42□□□□□ -2.02
LIMA1-205ENST00000550592 IL12BP29460 328 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 RPL22P35268 128 aaKnown RBP2.42□□□□□ -2.02
LIMA1-205ENST00000550592 MAGEA3P43357 314 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 LGALS7P47929 136 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 RAB5BP61020 215 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 PRKCDQ05655 676 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 FMODQ06828 376 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 GRK1Q15835 563 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 LPCAT3Q6P1A2 487 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 DGAT2L6Q6ZPD8 337 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 AMN1Q8IY45 258 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 OR2M3Q8NG83 312 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 OR2K2Q8NGT1 345 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 C16orf78Q8WTQ4 265 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 SFT2D1Q8WV19 159 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 TMBIM1Q969X1 311 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 C12orf43Q96C57 262 aaKnown RBP2.42□□□□□ -2.02
LIMA1-205ENST00000550592 FXYD5Q96DB9 178 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 TVP23CQ96ET8 276 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 PITX2Q99697 317 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 PRRT1Q99946 306 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 VPS25Q9BRG1 176 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 TM2D3Q9BRN9 247 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 MIXL1Q9H2W2 232 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 USE1Q9NZ43 259 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 SSR3Q9UNL2 185 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 HSPE1-MOB4S4R3N1 261 aa2.42□□□□□ -2.02
LIMA1-205ENST00000550592 IGHV3-43A0A0B4J1X8 118 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 IGHV1-18A0A0C4DH31 117 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 A0A0J9YW62 118 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 FABP12A6NFH5 140 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 ARPC5O15511 151 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 DLEU1O43261 78 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 CLPSP04118 112 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 TSPAN19P0C672 248 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 METTL15P1P0C7V9 234 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 UCHL3P15374 230 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 MAGEA12P43365 314 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 FOXA1P55317 472 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 MAGOHP61326 146 aaKnown RBP2.41□□□□□ -2.02
LIMA1-205ENST00000550592 PKIAP61925 76 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 TBPL1P62380 186 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 TNFRSF9Q07011 255 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 SPA17Q15506 151 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 TRAM1Q15629 374 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 TMEM241Q24JQ0 296 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 ZNF181Q2M3W8 571 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 BSXQ3C1V8 233 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 PABPC1L2AQ5JQF8 200 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 LPCAT4Q643R3 524 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 LGALS9CQ6DKI2 356 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 ZNF773Q6PK81 442 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 ARPINQ7Z6K5 226 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 COMMD7Q86VX2 200 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 ZFP82Q8N141 532 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 ZNF664Q8N3J9 261 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 OR2AE1Q8NHA4 323 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms