RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 NAA50Q9GZZ1 169 aaKnown RBP8.19□□□□□ -1.1
SMARCD1-208ENST00000550280 SAV1Q9H4B6 383 aaPredicted RBP8.19□□□□□ -1.1
SMARCD1-208ENST00000550280 HEYLQ9NQ87 328 aaPredicted RBP8.19□□□□□ -1.1
SMARCD1-208ENST00000550280 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.19□□□□□ -1.1
SMARCD1-208ENST00000550280 PRR13Q9NZ81 148 aa8.19□□□□□ -1.1
SMARCD1-208ENST00000550280 TEX13DA0A0J9YY54 714 aaPredicted RBP8.18□□□□□ -1.1
SMARCD1-208ENST00000550280 ATG12O94817 140 aa8.18□□□□□ -1.1
SMARCD1-208ENST00000550280 IFNA10P01566 189 aa8.18□□□□□ -1.1
SMARCD1-208ENST00000550280 RD3LP0DJH9 198 aa8.18□□□□□ -1.1
SMARCD1-208ENST00000550280 ZNF79Q15937 498 aa8.18□□□□□ -1.1
SMARCD1-208ENST00000550280 SCGB2B2Q4G0G5 96 aa8.18□□□□□ -1.1
SMARCD1-208ENST00000550280 FAM219AQ8IW50 185 aa8.18□□□□□ -1.1
SMARCD1-208ENST00000550280 CCDC71LQ8N9Z2 235 aa8.18□□□□□ -1.1
SMARCD1-208ENST00000550280 TMEM229BQ8NBD8 167 aa8.18□□□□□ -1.1
SMARCD1-208ENST00000550280 ZFAND1Q8TCF1 268 aa8.18□□□□□ -1.1
SMARCD1-208ENST00000550280 RBPMSQ93062 196 aaKnown RBP8.18□□□□□ -1.1
SMARCD1-208ENST00000550280 RNF125Q96EQ8 232 aa8.18□□□□□ -1.1
SMARCD1-208ENST00000550280 MIXL1Q9H2W2 232 aa8.18□□□□□ -1.1
SMARCD1-208ENST00000550280 NAA60Q9H7X0 242 aa8.18□□□□□ -1.1
SMARCD1-208ENST00000550280 TMEM189A5PLL7 270 aa8.17□□□□□ -1.1
SMARCD1-208ENST00000550280 SMIM9A6NGZ8 99 aa8.17□□□□□ -1.1
SMARCD1-208ENST00000550280 CEBPZOSA8MTT3 80 aa8.17□□□□□ -1.1
SMARCD1-208ENST00000550280 FAM25AB3EWG3 89 aa8.17□□□□□ -1.1
SMARCD1-208ENST00000550280 FAM25CB3EWG5 89 aa8.17□□□□□ -1.1
SMARCD1-208ENST00000550280 FAM25GB3EWG6 89 aa8.17□□□□□ -1.1
SMARCD1-208ENST00000550280 SCGB2A1O75556 95 aa8.17□□□□□ -1.1
SMARCD1-208ENST00000550280 RAB3DO95716 219 aa8.17□□□□□ -1.1
SMARCD1-208ENST00000550280 PRM2P04554 102 aa8.17□□□□□ -1.1
SMARCD1-208ENST00000550280 TBPP20226 339 aa8.17□□□□□ -1.1
SMARCD1-208ENST00000550280 ZNF90Q03938 601 aa8.17□□□□□ -1.1
SMARCD1-208ENST00000550280 TNP2Q05952 138 aa8.17□□□□□ -1.1
SMARCD1-208ENST00000550280 STEAP1BQ6NZ63 245 aa8.17□□□□□ -1.1
SMARCD1-208ENST00000550280 TMEM88Q6PEY1 159 aa8.17□□□□□ -1.1
SMARCD1-208ENST00000550280 FOXI2Q6ZQN5 318 aa8.17□□□□□ -1.1
SMARCD1-208ENST00000550280 RNASE11Q8TAA1 199 aaKnown RBP8.17□□□□□ -1.1
SMARCD1-208ENST00000550280 FAM210BQ96KR6 192 aa8.17□□□□□ -1.1
SMARCD1-208ENST00000550280 C20orf173Q96LM9 149 aa8.17□□□□□ -1.1
SMARCD1-208ENST00000550280 CLUHP3Q96NS8 147 aa8.17□□□□□ -1.1
SMARCD1-208ENST00000550280 NIPSNAP3BQ9BS92 247 aa8.17□□□□□ -1.1
SMARCD1-208ENST00000550280 EXTL2Q9UBQ6 330 aa8.17□□□□□ -1.1
SMARCD1-208ENST00000550280 GPR132Q9UNW8 380 aa8.17□□□□□ -1.1
SMARCD1-208ENST00000550280 YTHDF2Q9Y5A9 579 aaKnown RBP8.17□□□□□ -1.1
SMARCD1-208ENST00000550280 RFNGQ9Y644 331 aa8.17□□□□□ -1.1
SMARCD1-208ENST00000550280 HERC1Q15751 4861 aa8.17□□□□□ -1.1
SMARCD1-208ENST00000550280 A0A087WXM4 84 aa8.16□□□□□ -1.1
SMARCD1-208ENST00000550280 CRYM-AS1A6NIL9 109 aa8.16□□□□□ -1.1
SMARCD1-208ENST00000550280 A8MTW9 85 aa8.16□□□□□ -1.1
SMARCD1-208ENST00000550280 B3GALNT1O75752 331 aa8.16□□□□□ -1.1
SMARCD1-208ENST00000550280 IFNA21P01568 189 aa8.16□□□□□ -1.1
SMARCD1-208ENST00000550280 HTN3P15516 51 aa8.16□□□□□ -1.1
SMARCD1-208ENST00000550280 PAX9P55771 341 aa8.16□□□□□ -1.1
SMARCD1-208ENST00000550280 OXA1LQ15070 435 aa8.16□□□□□ -1.1
SMARCD1-208ENST00000550280 CTF1Q16619 201 aa8.16□□□□□ -1.1
SMARCD1-208ENST00000550280 RNF212Q495C1 297 aa8.16□□□□□ -1.1
SMARCD1-208ENST00000550280 TMEM268Q5VZI3 342 aa8.16□□□□□ -1.1
SMARCD1-208ENST00000550280 AMTNQ6UX39 209 aa8.16□□□□□ -1.1
SMARCD1-208ENST00000550280 UBE2DNLQ8IWF7 75 aa8.16□□□□□ -1.1
SMARCD1-208ENST00000550280 LINC00052Q96N35 136 aa8.16□□□□□ -1.1
SMARCD1-208ENST00000550280 TMEM56-RWDD3S4R434 201 aa8.16□□□□□ -1.1
SMARCD1-208ENST00000550280 IGKV1OR2-108A0A075B7D4 117 aa8.15□□□□□ -1.1
SMARCD1-208ENST00000550280 A0A0J9YX75 114 aa8.15□□□□□ -1.1
SMARCD1-208ENST00000550280 LOC102723971A0A1B0GUV8 181 aa8.15□□□□□ -1.1
SMARCD1-208ENST00000550280 GSTZ1O43708 216 aaPredicted RBP8.15□□□□□ -1.1
SMARCD1-208ENST00000550280 PSMB3P49720 205 aa8.15□□□□□ -1.1
SMARCD1-208ENST00000550280 RORCP51449 518 aa8.15□□□□□ -1.1
SMARCD1-208ENST00000550280 TAS2R19P59542 299 aa8.15□□□□□ -1.1
SMARCD1-208ENST00000550280 GAMTQ14353 236 aa8.15□□□□□ -1.1
SMARCD1-208ENST00000550280 C1orf134Q5TEV5 83 aa8.15□□□□□ -1.1
SMARCD1-208ENST00000550280 FAM78BQ5VT40 261 aa8.15□□□□□ -1.1
SMARCD1-208ENST00000550280 GPR107Q5VW38 600 aa8.15□□□□□ -1.1
SMARCD1-208ENST00000550280 OR8G2PQ6IF36 304 aa8.15□□□□□ -1.1
SMARCD1-208ENST00000550280 OR4B1Q8NGF8 309 aa8.15□□□□□ -1.1
SMARCD1-208ENST00000550280 PBDC1Q9BVG4 233 aa8.15□□□□□ -1.1
SMARCD1-208ENST00000550280 ETFRF1Q6IPR1 90 aa8.14□□□□□ -1.11
SMARCD1-208ENST00000550280 OR4C16Q8NGL9 310 aa8.14□□□□□ -1.11
SMARCD1-208ENST00000550280 RBKSQ9H477 322 aa8.14□□□□□ -1.11
SMARCD1-208ENST00000550280 HSPB7Q9UBY9 170 aa8.14□□□□□ -1.11
SMARCD1-208ENST00000550280 PLAC8L1A1L4L8 177 aa8.13□□□□□ -1.11
SMARCD1-208ENST00000550280 GABARAPH6UMI1 98 aa8.13□□□□□ -1.11
SMARCD1-208ENST00000550280 CRXO43186 299 aaPredicted RBP8.13□□□□□ -1.11
SMARCD1-208ENST00000550280 GABARAPO95166 117 aa8.13□□□□□ -1.11
SMARCD1-208ENST00000550280 ZNF182P17025 639 aaPredicted RBP8.13□□□□□ -1.11
SMARCD1-208ENST00000550280 SUPT4H1P63272 117 aaKnown RBP8.13□□□□□ -1.11
SMARCD1-208ENST00000550280 PSG9Q00887 426 aa8.13□□□□□ -1.11
SMARCD1-208ENST00000550280 KLF9Q13886 244 aaPredicted RBP8.13□□□□□ -1.11
SMARCD1-208ENST00000550280 SURF2Q15527 256 aaPredicted RBP8.13□□□□□ -1.11
SMARCD1-208ENST00000550280 LYZL2Q7Z4W2 148 aa8.13□□□□□ -1.11
SMARCD1-208ENST00000550280 ZNRF2Q8NHG8 242 aa8.13□□□□□ -1.11
SMARCD1-208ENST00000550280 DTD1Q8TEA8 209 aa8.13□□□□□ -1.11
SMARCD1-208ENST00000550280 C14orf166Q9Y224 244 aaKnown RBP8.13□□□□□ -1.11
SMARCD1-208ENST00000550280 TEX48A0A1B0GUV7 120 aa8.12□□□□□ -1.11
SMARCD1-208ENST00000550280 ISLRO14498 428 aa8.12□□□□□ -1.11
SMARCD1-208ENST00000550280 CTDSP2O14595 271 aa8.12□□□□□ -1.11
SMARCD1-208ENST00000550280 TNFAIP8O95379 198 aa8.12□□□□□ -1.11
SMARCD1-208ENST00000550280 HBE1P02100 147 aa8.12□□□□□ -1.11
SMARCD1-208ENST00000550280 SMIM18P0DKX4 95 aa8.12□□□□□ -1.11
SMARCD1-208ENST00000550280 SULT1A3P0DMM9 295 aa8.12□□□□□ -1.11
SMARCD1-208ENST00000550280 SULT1A4P0DMN0 295 aa8.12□□□□□ -1.11
SMARCD1-208ENST00000550280 LYZP61626 148 aa8.12□□□□□ -1.11
SMARCD1-208ENST00000550280 OR2F1Q13607 317 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms