RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 IGKV1-5P01602 117 aa7.33□□□□□ -1.24
VPS29-208ENST00000550267 IGLC1P0CG04 106 aa7.33□□□□□ -1.24
VPS29-208ENST00000550267 NAT1P18440 290 aa7.33□□□□□ -1.24
VPS29-208ENST00000550267 S100GP29377 79 aa7.33□□□□□ -1.24
VPS29-208ENST00000550267 RPL5P46777 297 aaKnown RBP7.33□□□□□ -1.24
VPS29-208ENST00000550267 TAS2R46P59540 309 aa7.33□□□□□ -1.24
VPS29-208ENST00000550267 ICAM4Q14773 271 aa7.33□□□□□ -1.24
VPS29-208ENST00000550267 FOXI2Q6ZQN5 318 aa7.33□□□□□ -1.24
VPS29-208ENST00000550267 OR1S2Q8NGQ3 325 aa7.33□□□□□ -1.24
VPS29-208ENST00000550267 LINC00052Q96N35 136 aa7.33□□□□□ -1.24
VPS29-208ENST00000550267 SSR3Q9UNL2 185 aa7.33□□□□□ -1.24
VPS29-208ENST00000550267 FAT1Q14517 4588 aa7.32□□□□□ -1.24
VPS29-208ENST00000550267 EBAG9O00559 213 aa7.32□□□□□ -1.24
VPS29-208ENST00000550267 BUB3O43684 328 aa7.32□□□□□ -1.24
VPS29-208ENST00000550267 IL4P05112 153 aa7.32□□□□□ -1.24
VPS29-208ENST00000550267 P0C879 139 aa7.32□□□□□ -1.24
VPS29-208ENST00000550267 PSMB9P28065 219 aa7.32□□□□□ -1.24
VPS29-208ENST00000550267 HRH1P35367 487 aa7.32□□□□□ -1.24
VPS29-208ENST00000550267 RND2P52198 227 aa7.32□□□□□ -1.24
VPS29-208ENST00000550267 CCL18P55774 89 aa7.32□□□□□ -1.24
VPS29-208ENST00000550267 TAS2R20P59543 309 aa7.32□□□□□ -1.24
VPS29-208ENST00000550267 BSXQ3C1V8 233 aa7.32□□□□□ -1.24
VPS29-208ENST00000550267 LPCAT3Q6P1A2 487 aa7.32□□□□□ -1.24
VPS29-208ENST00000550267 NRG4Q8WWG1 115 aa7.32□□□□□ -1.24
VPS29-208ENST00000550267 CLUHP3Q96NS8 147 aa7.32□□□□□ -1.24
VPS29-208ENST00000550267 PDCD10Q9BUL8 212 aa7.32□□□□□ -1.24
VPS29-208ENST00000550267 KRTAP1-5Q9BYS1 174 aa7.32□□□□□ -1.24
VPS29-208ENST00000550267 WDR12Q9GZL7 423 aaKnown RBP7.32□□□□□ -1.24
VPS29-208ENST00000550267 MAGT1Q9H0U3 335 aa7.32□□□□□ -1.24
VPS29-208ENST00000550267 ENY2Q9NPA8 101 aa7.32□□□□□ -1.24
VPS29-208ENST00000550267 MYCBP2O75592 4640 aa7.31□□□□□ -1.24
VPS29-208ENST00000550267 F5H768 121 aa7.31□□□□□ -1.24
VPS29-208ENST00000550267 F6UB75 175 aa7.31□□□□□ -1.24
VPS29-208ENST00000550267 PRM2P04554 102 aa7.31□□□□□ -1.24
VPS29-208ENST00000550267 HLA-DMAP28067 261 aa7.31□□□□□ -1.24
VPS29-208ENST00000550267 OR10J1P30954 320 aa7.31□□□□□ -1.24
VPS29-208ENST00000550267 ALDH3B2P48448 385 aa7.31□□□□□ -1.24
VPS29-208ENST00000550267 RORCP51449 518 aa7.31□□□□□ -1.24
VPS29-208ENST00000550267 AKR1C2P52895 323 aa7.31□□□□□ -1.24
VPS29-208ENST00000550267 YPEL3P61236 119 aaPredicted RBP7.31□□□□□ -1.24
VPS29-208ENST00000550267 TSPAN5P62079 268 aa7.31□□□□□ -1.24
VPS29-208ENST00000550267 DLK1P80370 383 aa7.31□□□□□ -1.24
VPS29-208ENST00000550267 PSG9Q00887 426 aa7.31□□□□□ -1.24
VPS29-208ENST00000550267 ZNF79Q15937 498 aa7.31□□□□□ -1.24
VPS29-208ENST00000550267 FAM78BQ5VT40 261 aa7.31□□□□□ -1.24
VPS29-208ENST00000550267 PRSS54Q6PEW0 395 aa7.31□□□□□ -1.24
VPS29-208ENST00000550267 LYSMD2Q8IV50 215 aa7.31□□□□□ -1.24
VPS29-208ENST00000550267 BLOC1S6Q9UL45 172 aa7.31□□□□□ -1.24
VPS29-208ENST00000550267 A0A0G2JRQ6 117 aa7.3□□□□□ -1.24
VPS29-208ENST00000550267 GSTZ1O43708 216 aaPredicted RBP7.3□□□□□ -1.24
VPS29-208ENST00000550267 DEFB130BP0DP73 79 aa7.3□□□□□ -1.24
VPS29-208ENST00000550267 DEFB130AP0DP74 79 aa7.3□□□□□ -1.24
VPS29-208ENST00000550267 HSPA13P48723 471 aa7.3□□□□□ -1.24
VPS29-208ENST00000550267 Q5VSD8 79 aa7.3□□□□□ -1.24
VPS29-208ENST00000550267 SSX7Q7RTT5 188 aa7.3□□□□□ -1.24
VPS29-208ENST00000550267 LYPD1Q8N2G4 141 aa7.3□□□□□ -1.24
VPS29-208ENST00000550267 OR51G1Q8NGK1 321 aa7.3□□□□□ -1.24
VPS29-208ENST00000550267 COQ8AQ8NI60 647 aa7.3□□□□□ -1.24
VPS29-208ENST00000550267 CNBD2Q96M20 576 aa7.3□□□□□ -1.24
VPS29-208ENST00000550267 TP53RKQ96S44 253 aa7.3□□□□□ -1.24
VPS29-208ENST00000550267 TMEM208Q9BTX3 173 aa7.3□□□□□ -1.24
VPS29-208ENST00000550267 Q9H8V8 135 aa7.3□□□□□ -1.24
VPS29-208ENST00000550267 SCPEP1Q9HB40 452 aa7.3□□□□□ -1.24
VPS29-208ENST00000550267 KLK11Q9UBX7 282 aa7.3□□□□□ -1.24
VPS29-208ENST00000550267 LYRM9A8MSI8 78 aa7.29□□□□□ -1.24
VPS29-208ENST00000550267 ZNF705GA8MUZ8 300 aaPredicted RBP7.29□□□□□ -1.24
VPS29-208ENST00000550267 M0QYG6 137 aa7.29□□□□□ -1.24
VPS29-208ENST00000550267 SOCS3O14543 225 aa7.29□□□□□ -1.24
VPS29-208ENST00000550267 NXPH3O95157 252 aa7.29□□□□□ -1.24
VPS29-208ENST00000550267 TOMM40O96008 361 aa7.29□□□□□ -1.24
VPS29-208ENST00000550267 RD3LP0DJH9 198 aa7.29□□□□□ -1.24
VPS29-208ENST00000550267 BTF3P20290 206 aaKnown RBP7.29□□□□□ -1.24
VPS29-208ENST00000550267 FUSP35637 526 aaKnown RBP eCLIP7.29□□□□□ -1.24
VPS29-208ENST00000550267 ID1P41134 155 aa7.29□□□□□ -1.24
VPS29-208ENST00000550267 PSMB3P49720 205 aa7.29□□□□□ -1.24
VPS29-208ENST00000550267 PAX9P55771 341 aa7.29□□□□□ -1.24
VPS29-208ENST00000550267 XGP55808 180 aa7.29□□□□□ -1.24
VPS29-208ENST00000550267 UCP3P55916 312 aa7.29□□□□□ -1.24
VPS29-208ENST00000550267 CLINT1Q14677 625 aa7.29□□□□□ -1.24
VPS29-208ENST00000550267 FCN2Q15485 313 aa7.29□□□□□ -1.24
VPS29-208ENST00000550267 TMEM69Q5SWH9 247 aa7.29□□□□□ -1.24
VPS29-208ENST00000550267 EBLN2Q6P2I7 272 aa7.29□□□□□ -1.24
VPS29-208ENST00000550267 NPIPB3Q92617 1050 aa7.29□□□□□ -1.24
VPS29-208ENST00000550267 GPR146Q96CH1 333 aa7.29□□□□□ -1.24
VPS29-208ENST00000550267 S100A16Q96FQ6 103 aaKnown RBP7.29□□□□□ -1.24
VPS29-208ENST00000550267 A0A0J9YX75 114 aa7.28□□□□□ -1.24
VPS29-208ENST00000550267 LOC100506127A0A0U1RQW1 187 aa7.28□□□□□ -1.24
VPS29-208ENST00000550267 PSG1P11464 419 aa7.28□□□□□ -1.24
VPS29-208ENST00000550267 SLC25A4P12235 298 aa7.28□□□□□ -1.24
VPS29-208ENST00000550267 PRSS3P35030 304 aa7.28□□□□□ -1.24
VPS29-208ENST00000550267 HTR2BP41595 481 aa7.28□□□□□ -1.24
VPS29-208ENST00000550267 TTC32Q5I0X7 151 aa7.28□□□□□ -1.24
VPS29-208ENST00000550267 SPATA31B1PQ5VZV4 182 aa7.28□□□□□ -1.24
VPS29-208ENST00000550267 SPARTQ8N0X7 666 aa7.28□□□□□ -1.24
VPS29-208ENST00000550267 ACY3Q96HD9 319 aa7.28□□□□□ -1.24
VPS29-208ENST00000550267 IGF2BP2-AS1Q96M15 143 aa7.28□□□□□ -1.24
VPS29-208ENST00000550267 DMBT1Q9UGM3 2413 aaPredicted RBP7.28□□□□□ -1.24
VPS29-208ENST00000550267 ATG12O94817 140 aa7.27□□□□□ -1.25
VPS29-208ENST00000550267 ATP5G1P05496 136 aa7.27□□□□□ -1.25
VPS29-208ENST00000550267 PGAM2P15259 253 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms