RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 HEYLQ9NQ87 328 aaPredicted RBP6.98□□□□□ -1.29
TRAFD1-207ENST00000550051 NXPH3O95157 252 aa6.97□□□□□ -1.29
TRAFD1-207ENST00000550051 PSG1P11464 419 aa6.97□□□□□ -1.29
TRAFD1-207ENST00000550051 TBPP20226 339 aa6.97□□□□□ -1.29
TRAFD1-207ENST00000550051 ZNF79Q15937 498 aa6.97□□□□□ -1.29
TRAFD1-207ENST00000550051 RNASE10Q5GAN6 216 aaKnown RBP6.97□□□□□ -1.29
TRAFD1-207ENST00000550051 FOXI2Q6ZQN5 318 aa6.97□□□□□ -1.29
TRAFD1-207ENST00000550051 NOXA1Q86UR1 476 aa6.97□□□□□ -1.29
TRAFD1-207ENST00000550051 SNX29P2Q8IUI4 249 aa6.97□□□□□ -1.29
TRAFD1-207ENST00000550051 CCDC71LQ8N9Z2 235 aa6.97□□□□□ -1.29
TRAFD1-207ENST00000550051 TERB2Q8NHR7 220 aa6.97□□□□□ -1.29
TRAFD1-207ENST00000550051 TMEM170AQ8WVE7 144 aa6.97□□□□□ -1.29
TRAFD1-207ENST00000550051 NPIPB3Q92617 1050 aa6.97□□□□□ -1.29
TRAFD1-207ENST00000550051 YIPF6Q96EC8 236 aa6.97□□□□□ -1.29
TRAFD1-207ENST00000550051 ABHD1Q96SE0 405 aa6.97□□□□□ -1.29
TRAFD1-207ENST00000550051 COPZ2Q9P299 210 aa6.97□□□□□ -1.29
TRAFD1-207ENST00000550051 COMMD3Q9UBI1 195 aa6.97□□□□□ -1.29
TRAFD1-207ENST00000550051 KLK11Q9UBX7 282 aa6.97□□□□□ -1.29
TRAFD1-207ENST00000550051 CACFD1Q9UGQ2 172 aa6.97□□□□□ -1.29
TRAFD1-207ENST00000550051 PFDN2Q9UHV9 154 aa6.97□□□□□ -1.29
TRAFD1-207ENST00000550051 IGHV3OR16-12A0A075B7B8 117 aa6.96□□□□□ -1.3
TRAFD1-207ENST00000550051 IGKV3-20P01619 116 aa6.96□□□□□ -1.3
TRAFD1-207ENST00000550051 CD3DP04234 171 aa6.96□□□□□ -1.3
TRAFD1-207ENST00000550051 ELK1P19419 428 aa6.96□□□□□ -1.3
TRAFD1-207ENST00000550051 NUP62P37198 522 aaPredicted RBP6.96□□□□□ -1.3
TRAFD1-207ENST00000550051 ID1P41134 155 aa6.96□□□□□ -1.3
TRAFD1-207ENST00000550051 C1orf194Q5T5A4 169 aa6.96□□□□□ -1.3
TRAFD1-207ENST00000550051 TMEM88Q6PEY1 159 aa6.96□□□□□ -1.3
TRAFD1-207ENST00000550051 C1orf158Q8N1D5 194 aa6.96□□□□□ -1.3
TRAFD1-207ENST00000550051 C15orf53Q8NAA6 179 aa6.96□□□□□ -1.3
TRAFD1-207ENST00000550051 SLC24A4Q8NFF2 622 aa6.96□□□□□ -1.3
TRAFD1-207ENST00000550051 GLYATL2Q8WU03 294 aa6.96□□□□□ -1.3
TRAFD1-207ENST00000550051 TMEM222Q9H0R3 208 aa6.96□□□□□ -1.3
TRAFD1-207ENST00000550051 GOLT1BQ9Y3E0 138 aa6.96□□□□□ -1.3
TRAFD1-207ENST00000550051 ABCA13Q86UQ4 5058 aa6.96□□□□□ -1.3
TRAFD1-207ENST00000550051 HSPG2P98160 4391 aa6.95□□□□□ -1.3
TRAFD1-207ENST00000550051 TEX13DA0A0J9YY54 714 aaPredicted RBP6.95□□□□□ -1.3
TRAFD1-207ENST00000550051 LOC102723971A0A1B0GUV8 181 aa6.95□□□□□ -1.3
TRAFD1-207ENST00000550051 A8MTW9 85 aa6.95□□□□□ -1.3
TRAFD1-207ENST00000550051 C16orf90A8MZG2 172 aa6.95□□□□□ -1.3
TRAFD1-207ENST00000550051 SOCS3O14543 225 aa6.95□□□□□ -1.3
TRAFD1-207ENST00000550051 HBE1P02100 147 aa6.95□□□□□ -1.3
TRAFD1-207ENST00000550051 H2AFB1P0C5Y9 115 aa6.95□□□□□ -1.3
TRAFD1-207ENST00000550051 H2AFB2P0C5Z0 115 aa6.95□□□□□ -1.3
TRAFD1-207ENST00000550051 ALDH3B2P48448 385 aa6.95□□□□□ -1.3
TRAFD1-207ENST00000550051 PSMB3P49720 205 aa6.95□□□□□ -1.3
TRAFD1-207ENST00000550051 PAX9P55771 341 aa6.95□□□□□ -1.3
TRAFD1-207ENST00000550051 FXYD7P58549 80 aa6.95□□□□□ -1.3
TRAFD1-207ENST00000550051 LSM3P62310 102 aaKnown RBP6.95□□□□□ -1.3
TRAFD1-207ENST00000550051 PSG9Q00887 426 aa6.95□□□□□ -1.3
TRAFD1-207ENST00000550051 NMSQ5H8A3 153 aa6.95□□□□□ -1.3
TRAFD1-207ENST00000550051 OR8G2PQ6IF36 304 aa6.95□□□□□ -1.3
TRAFD1-207ENST00000550051 SELENOHQ8IZQ5 122 aaKnown RBP6.95□□□□□ -1.3
TRAFD1-207ENST00000550051 OR51G1Q8NGK1 321 aa6.95□□□□□ -1.3
TRAFD1-207ENST00000550051 RNASE11Q8TAA1 199 aaKnown RBP6.95□□□□□ -1.3
TRAFD1-207ENST00000550051 GPR146Q96CH1 333 aa6.95□□□□□ -1.3
TRAFD1-207ENST00000550051 LINC00052Q96N35 136 aa6.95□□□□□ -1.3
TRAFD1-207ENST00000550051 WDR12Q9GZL7 423 aaKnown RBP6.95□□□□□ -1.3
TRAFD1-207ENST00000550051 MTFP1Q9UDX5 166 aa6.95□□□□□ -1.3
TRAFD1-207ENST00000550051 TMED3Q9Y3Q3 217 aa6.95□□□□□ -1.3
TRAFD1-207ENST00000550051 YTHDF2Q9Y5A9 579 aaKnown RBP6.95□□□□□ -1.3
TRAFD1-207ENST00000550051 ISLRO14498 428 aa6.94□□□□□ -1.3
TRAFD1-207ENST00000550051 HPGDSO60760 199 aa6.94□□□□□ -1.3
TRAFD1-207ENST00000550051 HTN3P15516 51 aa6.94□□□□□ -1.3
TRAFD1-207ENST00000550051 RORCP51449 518 aa6.94□□□□□ -1.3
TRAFD1-207ENST00000550051 ATP5IP56385 69 aaPredicted RBP6.94□□□□□ -1.3
TRAFD1-207ENST00000550051 DEFB1P60022 68 aa6.94□□□□□ -1.3
TRAFD1-207ENST00000550051 DAD1P61803 113 aa6.94□□□□□ -1.3
TRAFD1-207ENST00000550051 KLF9Q13886 244 aaPredicted RBP6.94□□□□□ -1.3
TRAFD1-207ENST00000550051 RRN3P1Q2M238 152 aa6.94□□□□□ -1.3
TRAFD1-207ENST00000550051 Q8N1X5 172 aa6.94□□□□□ -1.3
TRAFD1-207ENST00000550051 MAPKAPK5-AS1Q8N8E1 139 aa6.94□□□□□ -1.3
TRAFD1-207ENST00000550051 TMEM229BQ8NBD8 167 aa6.94□□□□□ -1.3
TRAFD1-207ENST00000550051 OR4B1Q8NGF8 309 aa6.94□□□□□ -1.3
TRAFD1-207ENST00000550051 OR13C8Q8NGS7 320 aa6.94□□□□□ -1.3
TRAFD1-207ENST00000550051 OR52I2Q8NH67 350 aa6.94□□□□□ -1.3
TRAFD1-207ENST00000550051 LHFPL5Q8TAF8 219 aa6.94□□□□□ -1.3
TRAFD1-207ENST00000550051 RBPMSQ93062 196 aaKnown RBP6.94□□□□□ -1.3
TRAFD1-207ENST00000550051 RNF125Q96EQ8 232 aa6.94□□□□□ -1.3
TRAFD1-207ENST00000550051 ACY3Q96HD9 319 aa6.94□□□□□ -1.3
TRAFD1-207ENST00000550051 RTBDNQ9BSG5 229 aaPredicted RBP6.94□□□□□ -1.3
TRAFD1-207ENST00000550051 SLC35B3Q9H1N7 401 aa6.94□□□□□ -1.3
TRAFD1-207ENST00000550051 CACNG5Q9UF02 275 aa6.94□□□□□ -1.3
TRAFD1-207ENST00000550051 U3KQ87 197 aa6.94□□□□□ -1.3
TRAFD1-207ENST00000550051 A0A0J9YX75 114 aa6.93□□□□□ -1.3
TRAFD1-207ENST00000550051 NBDYA0A0U1RRE5 68 aa6.93□□□□□ -1.3
TRAFD1-207ENST00000550051 CEBPZOSA8MTT3 80 aa6.93□□□□□ -1.3
TRAFD1-207ENST00000550051 ATP6V1G2O95670 118 aa6.93□□□□□ -1.3
TRAFD1-207ENST00000550051 OR5AC1P0C628 307 aa6.93□□□□□ -1.3
TRAFD1-207ENST00000550051 GPX4P36969 197 aaPredicted RBP6.93□□□□□ -1.3
TRAFD1-207ENST00000550051 SUPT4H1P63272 117 aaKnown RBP6.93□□□□□ -1.3
TRAFD1-207ENST00000550051 FAM78BQ5VT40 261 aa6.93□□□□□ -1.3
TRAFD1-207ENST00000550051 SAMD13Q5VXD3 122 aa6.93□□□□□ -1.3
TRAFD1-207ENST00000550051 EBLN2Q6P2I7 272 aa6.93□□□□□ -1.3
TRAFD1-207ENST00000550051 GSG1LQ6UXU4 331 aa6.93□□□□□ -1.3
TRAFD1-207ENST00000550051 C6orf223Q8N319 242 aa6.93□□□□□ -1.3
TRAFD1-207ENST00000550051 OR4D10Q8NGI6 311 aa6.93□□□□□ -1.3
TRAFD1-207ENST00000550051 ZNRF2Q8NHG8 242 aa6.93□□□□□ -1.3
TRAFD1-207ENST00000550051 MARCH1Q8TCQ1 289 aa6.93□□□□□ -1.3
TRAFD1-207ENST00000550051 C15orf40Q8WUR7 153 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms