RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 PPP1R14DQ9NXH3 145 aa7.87□□□□□ -1.15
RAB5B-206ENST00000549505 GAR1Q9NY12 217 aaKnown RBP7.87□□□□□ -1.15
RAB5B-206ENST00000549505 RNF24Q9Y225 148 aa7.87□□□□□ -1.15
RAB5B-206ENST00000549505 PIEZO2Q9H5I5 2752 aa7.87□□□□□ -1.15
RAB5B-206ENST00000549505 TRBV9A0A0B4J1U6 114 aa7.87□□□□□ -1.15
RAB5B-206ENST00000549505 K7EN84 100 aa7.87□□□□□ -1.15
RAB5B-206ENST00000549505 ISLRO14498 428 aa7.87□□□□□ -1.15
RAB5B-206ENST00000549505 MRPS12O15235 138 aaKnown RBP7.87□□□□□ -1.15
RAB5B-206ENST00000549505 HYPMO75409 117 aa7.87□□□□□ -1.15
RAB5B-206ENST00000549505 LYPD1Q8N2G4 141 aa7.87□□□□□ -1.15
RAB5B-206ENST00000549505 OCC1Q8TAD7 63 aa7.87□□□□□ -1.15
RAB5B-206ENST00000549505 ARPC1AQ92747 370 aa7.87□□□□□ -1.15
RAB5B-206ENST00000549505 PIMREGQ9BSJ6 248 aa7.87□□□□□ -1.15
RAB5B-206ENST00000549505 PAXXQ9BUH6 204 aa7.87□□□□□ -1.15
RAB5B-206ENST00000549505 DERL1Q9BUN8 251 aa7.87□□□□□ -1.15
RAB5B-206ENST00000549505 C7orf69Q9H7B7 122 aa7.87□□□□□ -1.15
RAB5B-206ENST00000549505 GOLT1BQ9Y3E0 138 aa7.87□□□□□ -1.15
RAB5B-206ENST00000549505 IGHV7-81A0A0B4J1V7 117 aa7.87□□□□□ -1.15
RAB5B-206ENST00000549505 IFITM10A6NMD0 228 aa7.87□□□□□ -1.15
RAB5B-206ENST00000549505 GATA2P23769 480 aaPredicted RBP7.87□□□□□ -1.15
RAB5B-206ENST00000549505 RPL15P61313 204 aaKnown RBP7.87□□□□□ -1.15
RAB5B-206ENST00000549505 NUTF2P61970 127 aaKnown RBP7.87□□□□□ -1.15
RAB5B-206ENST00000549505 ACTL10Q5JWF8 245 aa7.87□□□□□ -1.15
RAB5B-206ENST00000549505 FAM110DQ8TAY7 271 aaPredicted RBP7.87□□□□□ -1.15
RAB5B-206ENST00000549505 ELOVL1Q9BW60 279 aa7.87□□□□□ -1.15
RAB5B-206ENST00000549505 H3BRN7 92 aa7.86□□□□□ -1.15
RAB5B-206ENST00000549505 NPFFO15130 113 aa7.86□□□□□ -1.15
RAB5B-206ENST00000549505 BRS3P32247 399 aa7.86□□□□□ -1.15
RAB5B-206ENST00000549505 UBE2G2P60604 165 aa7.86□□□□□ -1.15
RAB5B-206ENST00000549505 CX3CL1P78423 397 aa7.86□□□□□ -1.15
RAB5B-206ENST00000549505 KCNIP4Q6PIL6 250 aa7.86□□□□□ -1.15
RAB5B-206ENST00000549505 OR5AU1Q8NGC0 362 aa7.86□□□□□ -1.15
RAB5B-206ENST00000549505 A0A096LNT2 108 aa7.86□□□□□ -1.15
RAB5B-206ENST00000549505 CENPVL3A0A0U1RRI6 287 aa7.86□□□□□ -1.15
RAB5B-206ENST00000549505 GATA3P23771 443 aa7.86□□□□□ -1.15
RAB5B-206ENST00000549505 TMEM183BQ1AE95 376 aa7.86□□□□□ -1.15
RAB5B-206ENST00000549505 LINC00305Q7Z4B0 112 aa7.86□□□□□ -1.15
RAB5B-206ENST00000549505 SGMS2Q8NHU3 365 aa7.86□□□□□ -1.15
RAB5B-206ENST00000549505 OR5B12Q96R08 314 aa7.86□□□□□ -1.15
RAB5B-206ENST00000549505 SHANK2-AS3Q9BTD1 123 aa7.86□□□□□ -1.15
RAB5B-206ENST00000549505 HIST1H2BKO60814 126 aa7.85□□□□□ -1.15
RAB5B-206ENST00000549505 REG1AP05451 166 aa7.85□□□□□ -1.15
RAB5B-206ENST00000549505 HIST1H2BJP06899 126 aa7.85□□□□□ -1.15
RAB5B-206ENST00000549505 HIST1H2BOP23527 126 aa7.85□□□□□ -1.15
RAB5B-206ENST00000549505 HIST1H2BBP33778 126 aa7.85□□□□□ -1.15
RAB5B-206ENST00000549505 HIST1H2BDP58876 126 aa7.85□□□□□ -1.15
RAB5B-206ENST00000549505 HIST1H2BCP62807 126 aa7.85□□□□□ -1.15
RAB5B-206ENST00000549505 HIST2H2BEQ16778 126 aa7.85□□□□□ -1.15
RAB5B-206ENST00000549505 ZNF674Q2M3X9 581 aa7.85□□□□□ -1.15
RAB5B-206ENST00000549505 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.85□□□□□ -1.15
RAB5B-206ENST00000549505 HIST1H2BHQ93079 126 aa7.85□□□□□ -1.15
RAB5B-206ENST00000549505 MBD6Q96DN6 1003 aa7.85□□□□□ -1.15
RAB5B-206ENST00000549505 HIST1H2BNQ99877 126 aa7.85□□□□□ -1.15
RAB5B-206ENST00000549505 HIST1H2BMQ99879 126 aa7.85□□□□□ -1.15
RAB5B-206ENST00000549505 IL36BQ9NZH7 164 aa7.85□□□□□ -1.15
RAB5B-206ENST00000549505 V9GYV3 84 aa7.85□□□□□ -1.15
RAB5B-206ENST00000549505 HELTA6NFD8 242 aa7.85□□□□□ -1.15
RAB5B-206ENST00000549505 TCF21O43680 179 aa7.85□□□□□ -1.15
RAB5B-206ENST00000549505 CDX1P47902 265 aaPredicted RBP7.85□□□□□ -1.15
RAB5B-206ENST00000549505 Q5PR19 223 aa7.85□□□□□ -1.15
RAB5B-206ENST00000549505 COX8CQ7Z4L0 72 aa7.85□□□□□ -1.15
RAB5B-206ENST00000549505 S100A7AQ86SG5 101 aa7.85□□□□□ -1.15
RAB5B-206ENST00000549505 CCL19Q99731 98 aa7.85□□□□□ -1.15
RAB5B-206ENST00000549505 HILPDAQ9Y5L2 63 aa7.85□□□□□ -1.15
RAB5B-206ENST00000549505 LOC102724200A0A096LPH7 203 aaPredicted RBP7.85□□□□□ -1.15
RAB5B-206ENST00000549505 UBE2L3P68036 154 aaKnown RBP7.85□□□□□ -1.15
RAB5B-206ENST00000549505 NDPQ00604 133 aa7.85□□□□□ -1.15
RAB5B-206ENST00000549505 PIFOQ8TCI5 191 aa7.85□□□□□ -1.15
RAB5B-206ENST00000549505 FAM168AQ92567 244 aa7.85□□□□□ -1.15
RAB5B-206ENST00000549505 MLST8Q9BVC4 326 aa7.85□□□□□ -1.15
RAB5B-206ENST00000549505 HIGD1AQ9Y241 93 aa7.85□□□□□ -1.15
RAB5B-206ENST00000549505 PTPRZ1P23471 2315 aaPredicted RBP7.84□□□□□ -1.15
RAB5B-206ENST00000549505 TRAV5A0A0B4J249 113 aa7.84□□□□□ -1.15
RAB5B-206ENST00000549505 IGHV1-69DA0A0B4J2H0 117 aa7.84□□□□□ -1.15
RAB5B-206ENST00000549505 ZNF253O75346 499 aa7.84□□□□□ -1.15
RAB5B-206ENST00000549505 IGHV1-69P01742 117 aa7.84□□□□□ -1.15
RAB5B-206ENST00000549505 IGLC2P0DOY2 106 aa7.84□□□□□ -1.15
RAB5B-206ENST00000549505 PSG1P11464 419 aa7.84□□□□□ -1.15
RAB5B-206ENST00000549505 LGALS4P56470 323 aa7.84□□□□□ -1.15
RAB5B-206ENST00000549505 COX19Q49B96 90 aa7.84□□□□□ -1.15
RAB5B-206ENST00000549505 ZNF491Q8N8L2 437 aa7.84□□□□□ -1.15
RAB5B-206ENST00000549505 OR10G8Q8NGN5 311 aa7.84□□□□□ -1.15
RAB5B-206ENST00000549505 DOCK11Q5JSL3 2073 aa7.84□□□□□ -1.15
RAB5B-206ENST00000549505 ANKHD1Q8IWZ3 2542 aaKnown RBP7.84□□□□□ -1.15
RAB5B-206ENST00000549505 SMIM27A0A1W2PRY6 76 aa7.84□□□□□ -1.15
RAB5B-206ENST00000549505 OR7C2O60412 319 aa7.84□□□□□ -1.15
RAB5B-206ENST00000549505 HIST1H1EP10412 219 aaKnown RBP7.84□□□□□ -1.15
RAB5B-206ENST00000549505 SAA4P35542 130 aa7.84□□□□□ -1.15
RAB5B-206ENST00000549505 PDE6HQ13956 83 aa7.84□□□□□ -1.15
RAB5B-206ENST00000549505 RASL11AQ6T310 242 aa7.84□□□□□ -1.15
RAB5B-206ENST00000549505 PIP4P2Q8N4L2 257 aa7.84□□□□□ -1.15
RAB5B-206ENST00000549505 SLC25A39Q9BZJ4 359 aaPredicted RBP7.84□□□□□ -1.15
RAB5B-206ENST00000549505 OTORQ9NRC9 128 aa7.84□□□□□ -1.15
RAB5B-206ENST00000549505 ZNF492Q9P255 531 aa7.84□□□□□ -1.15
RAB5B-206ENST00000549505 CBY3A6NI87 242 aa7.83□□□□□ -1.16
RAB5B-206ENST00000549505 PEX7O00628 323 aa7.83□□□□□ -1.16
RAB5B-206ENST00000549505 MFAP4P55083 255 aa7.83□□□□□ -1.16
RAB5B-206ENST00000549505 C5orf56Q8N8D9 126 aa7.83□□□□□ -1.16
RAB5B-206ENST00000549505 THYN1Q9P016 225 aa7.83□□□□□ -1.16
RAB5B-206ENST00000549505 EPDR1Q9UM22 224 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms