RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 LYPD2Q6UXB3 125 aa8.97□□□□□ -0.97
LINC00661-204ENST00000549354 TEX43Q6ZNM6 134 aa8.97□□□□□ -0.97
LINC00661-204ENST00000549354 CORO2AQ92828 525 aa8.97□□□□□ -0.97
LINC00661-204ENST00000549354 LSM4Q9Y4Z0 139 aaKnown RBP8.97□□□□□ -0.97
LINC00661-204ENST00000549354 CNTFRP26992 372 aa8.97□□□□□ -0.97
LINC00661-204ENST00000549354 HNRNPA3P51991 378 aaKnown RBP8.97□□□□□ -0.97
LINC00661-204ENST00000549354 PLGLAQ15195 96 aa8.97□□□□□ -0.97
LINC00661-204ENST00000549354 ZC2HC1AQ96GY0 325 aa8.97□□□□□ -0.97
LINC00661-204ENST00000549354 C15orf61A6NNL5 157 aa8.96□□□□□ -0.97
LINC00661-204ENST00000549354 BMPR1BO00238 502 aa8.96□□□□□ -0.97
LINC00661-204ENST00000549354 UNQ5815/PRO19632Q6UWF5 114 aa8.96□□□□□ -0.97
LINC00661-204ENST00000549354 TCF24Q7RTU0 167 aa8.96□□□□□ -0.97
LINC00661-204ENST00000549354 ZNF439Q8NDP4 499 aa8.96□□□□□ -0.97
LINC00661-204ENST00000549354 ZNF503Q96F45 646 aa8.96□□□□□ -0.97
LINC00661-204ENST00000549354 IDI2-AS1Q9NZ38 188 aa8.96□□□□□ -0.97
LINC00661-204ENST00000549354 MRPL36Q9P0J6 103 aaKnown RBP8.96□□□□□ -0.97
LINC00661-204ENST00000549354 LOXP28300 417 aaPredicted RBP8.96□□□□□ -0.98
LINC00661-204ENST00000549354 APOBEC3AP31941 199 aaPredicted RBP8.96□□□□□ -0.98
LINC00661-204ENST00000549354 BORCS7Q96B45 105 aa8.96□□□□□ -0.98
LINC00661-204ENST00000549354 ZNF331Q9NQX6 463 aaPredicted RBP8.96□□□□□ -0.98
LINC00661-204ENST00000549354 CDC42EP3Q9UKI2 254 aa8.96□□□□□ -0.98
LINC00661-204ENST00000549354 UTP20O75691 2785 aaKnown RBP8.96□□□□□ -0.98
LINC00661-204ENST00000549354 COX7A2P2O60397 106 aa8.95□□□□□ -0.98
LINC00661-204ENST00000549354 SELENOTP62341 195 aa8.95□□□□□ -0.98
LINC00661-204ENST00000549354 C17orf58Q2M2W7 97 aa8.95□□□□□ -0.98
LINC00661-204ENST00000549354 TMEM30BQ3MIR4 351 aa8.95□□□□□ -0.98
LINC00661-204ENST00000549354 RAB9BQ9NP90 201 aa8.95□□□□□ -0.98
LINC00661-204ENST00000549354 CLEC5AQ9NY25 188 aa8.95□□□□□ -0.98
LINC00661-204ENST00000549354 TMEM8BA6NDV4 472 aa8.95□□□□□ -0.98
LINC00661-204ENST00000549354 HSBP1O75506 76 aa8.95□□□□□ -0.98
LINC00661-204ENST00000549354 IGHV3-23P01764 117 aa8.95□□□□□ -0.98
LINC00661-204ENST00000549354 APCSP02743 223 aa8.95□□□□□ -0.98
LINC00661-204ENST00000549354 KLF17Q5JT82 389 aaPredicted RBP8.95□□□□□ -0.98
LINC00661-204ENST00000549354 TMEM136Q6ZRR5 245 aa8.95□□□□□ -0.98
LINC00661-204ENST00000549354 DYNLRB1Q9NP97 96 aa8.95□□□□□ -0.98
LINC00661-204ENST00000549354 NOTCH2Q04721 2471 aa8.95□□□□□ -0.98
LINC00661-204ENST00000549354 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.95□□□□□ -0.98
LINC00661-204ENST00000549354 B9A039 149 aa8.95□□□□□ -0.98
LINC00661-204ENST00000549354 TMEM178BH3BS89 294 aa8.95□□□□□ -0.98
LINC00661-204ENST00000549354 CD3EP07766 207 aa8.95□□□□□ -0.98
LINC00661-204ENST00000549354 TNXAQ16473 311 aa8.95□□□□□ -0.98
LINC00661-204ENST00000549354 OR52E5Q8NH55 327 aa8.95□□□□□ -0.98
LINC00661-204ENST00000549354 RBM14Q96PK6 669 aaKnown RBP8.95□□□□□ -0.98
LINC00661-204ENST00000549354 CLEC7AQ9BXN2 247 aa8.95□□□□□ -0.98
LINC00661-204ENST00000549354 FSTL3O95633 263 aa8.94□□□□□ -0.98
LINC00661-204ENST00000549354 C16orf54Q6UWD8 224 aa8.94□□□□□ -0.98
LINC00661-204ENST00000549354 C20orf144Q9BQM9 153 aa8.94□□□□□ -0.98
LINC00661-204ENST00000549354 SLC25A10Q9UBX3 287 aaPredicted RBP8.94□□□□□ -0.98
LINC00661-204ENST00000549354 SLC45A2Q9UMX9 530 aa8.94□□□□□ -0.98
LINC00661-204ENST00000549354 ABCA12Q86UK0 2595 aa8.94□□□□□ -0.98
LINC00661-204ENST00000549354 IGHV3OR16-13A0A075B7E8 117 aa8.94□□□□□ -0.98
LINC00661-204ENST00000549354 IGHV3-74A0A0B4J1X5 117 aa8.94□□□□□ -0.98
LINC00661-204ENST00000549354 KBTBD11-OT1A0A1B0GTJ5 212 aa8.94□□□□□ -0.98
LINC00661-204ENST00000549354 HYPMO75409 117 aa8.94□□□□□ -0.98
LINC00661-204ENST00000549354 ZNF324O75467 553 aaPredicted RBP8.94□□□□□ -0.98
LINC00661-204ENST00000549354 SLC25A5P05141 298 aaKnown RBP8.94□□□□□ -0.98
LINC00661-204ENST00000549354 CT45A6P0DMU7 189 aa8.94□□□□□ -0.98
LINC00661-204ENST00000549354 CT45A5P0DMU8 189 aa8.94□□□□□ -0.98
LINC00661-204ENST00000549354 CT45A7P0DMV0 189 aa8.94□□□□□ -0.98
LINC00661-204ENST00000549354 PCP4P48539 62 aa8.94□□□□□ -0.98
LINC00661-204ENST00000549354 CX3CL1P78423 397 aa8.94□□□□□ -0.98
LINC00661-204ENST00000549354 TSKUQ8WUA8 353 aa8.94□□□□□ -0.98
LINC00661-204ENST00000549354 ISLRO14498 428 aa8.93□□□□□ -0.98
LINC00661-204ENST00000549354 CDSNQ15517 529 aa8.93□□□□□ -0.98
LINC00661-204ENST00000549354 COL5A1-AS1Q5SY13 56 aa8.93□□□□□ -0.98
LINC00661-204ENST00000549354 SLC35E1Q96K37 410 aa8.93□□□□□ -0.98
LINC00661-204ENST00000549354 RNF2Q99496 336 aa8.93□□□□□ -0.98
LINC00661-204ENST00000549354 TEX50A0A1B0GTY4 177 aa8.93□□□□□ -0.98
LINC00661-204ENST00000549354 M0R2Z0 102 aa8.93□□□□□ -0.98
LINC00661-204ENST00000549354 KCNS1Q96KK3 526 aa8.93□□□□□ -0.98
LINC00661-204ENST00000549354 RNF24Q9Y225 148 aa8.93□□□□□ -0.98
LINC00661-204ENST00000549354 HILPDAQ9Y5L2 63 aa8.93□□□□□ -0.98
LINC00661-204ENST00000549354 RAI1Q7Z5J4 1906 aaPredicted RBP8.93□□□□□ -0.98
LINC00661-204ENST00000549354 FAM90A27PA6NNH2 459 aa8.93□□□□□ -0.98
LINC00661-204ENST00000549354 M0QZK8 103 aa8.93□□□□□ -0.98
LINC00661-204ENST00000549354 RBP4P02753 201 aa8.93□□□□□ -0.98
LINC00661-204ENST00000549354 AREGP15514 252 aa8.93□□□□□ -0.98
LINC00661-204ENST00000549354 PTTG1IPP53801 180 aa8.93□□□□□ -0.98
LINC00661-204ENST00000549354 PRR20EP86478 221 aa8.93□□□□□ -0.98
LINC00661-204ENST00000549354 PRR20CP86479 221 aa8.93□□□□□ -0.98
LINC00661-204ENST00000549354 PRR20DP86480 221 aa8.93□□□□□ -0.98
LINC00661-204ENST00000549354 PRR20BP86481 221 aa8.93□□□□□ -0.98
LINC00661-204ENST00000549354 PRR20AP86496 221 aa8.93□□□□□ -0.98
LINC00661-204ENST00000549354 Q8N976 141 aa8.93□□□□□ -0.98
LINC00661-204ENST00000549354 OR5B3Q8NH48 314 aa8.93□□□□□ -0.98
LINC00661-204ENST00000549354 LINC01560Q8TB33 94 aa8.93□□□□□ -0.98
LINC00661-204ENST00000549354 GNB1LQ9BYB4 327 aa8.93□□□□□ -0.98
LINC00661-204ENST00000549354 PGPA6NDG6 321 aa8.92□□□□□ -0.98
LINC00661-204ENST00000549354 GRNP28799 593 aaKnown RBP8.92□□□□□ -0.98
LINC00661-204ENST00000549354 LYZP61626 148 aa8.92□□□□□ -0.98
LINC00661-204ENST00000549354 RPL19P84098 196 aaKnown RBP8.92□□□□□ -0.98
LINC00661-204ENST00000549354 MEF2CQ06413 473 aaPredicted RBP8.92□□□□□ -0.98
LINC00661-204ENST00000549354 RTL8BQ17RB0 113 aa8.92□□□□□ -0.98
LINC00661-204ENST00000549354 NIT1Q86X76 327 aa8.92□□□□□ -0.98
LINC00661-204ENST00000549354 PGLYRP4Q96LB8 373 aa8.92□□□□□ -0.98
LINC00661-204ENST00000549354 KAAG1Q9UBP8 84 aa8.92□□□□□ -0.98
LINC00661-204ENST00000549354 LAMTOR2Q9Y2Q5 125 aa8.92□□□□□ -0.98
LINC00661-204ENST00000549354 AMMECR1Q9Y4X0 333 aaPredicted RBP8.92□□□□□ -0.98
LINC00661-204ENST00000549354 RNF151Q2KHN1 245 aa8.92□□□□□ -0.98
LINC00661-204ENST00000549354 IGFL4Q6B9Z1 124 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms