RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 RNF7Q9UBF6 113 aa18.64■□□□□ 0.58
NPAS3-206ENST00000548645 HSPB8Q9UJY1 196 aa18.64■□□□□ 0.58
NPAS3-206ENST00000548645 NBEAQ8NFP9 2946 aa18.64■□□□□ 0.57
NPAS3-206ENST00000548645 CHEK1O14757 476 aa18.64■□□□□ 0.57
NPAS3-206ENST00000548645 TMEM177Q53S58 311 aa18.64■□□□□ 0.57
NPAS3-206ENST00000548645 ZNF833PQ6ZTB9 187 aa18.64■□□□□ 0.57
NPAS3-206ENST00000548645 BHLHA15Q7RTS1 189 aaPredicted RBP18.64■□□□□ 0.57
NPAS3-206ENST00000548645 LOC102724200A0A096LPH7 203 aaPredicted RBP18.63■□□□□ 0.57
NPAS3-206ENST00000548645 C19orf71A6NCJ1 209 aa18.63■□□□□ 0.57
NPAS3-206ENST00000548645 LPAL2Q16609 132 aa18.63■□□□□ 0.57
NPAS3-206ENST00000548645 ATP1A1-AS1Q5TC04 95 aa18.63■□□□□ 0.57
NPAS3-206ENST00000548645 E7EUB6 86 aa18.63■□□□□ 0.57
NPAS3-206ENST00000548645 DEFB108BQ8NET1 73 aa18.63■□□□□ 0.57
NPAS3-206ENST00000548645 GAFA1Q96PS6 74 aa18.63■□□□□ 0.57
NPAS3-206ENST00000548645 MRPL20Q9BYC9 149 aaKnown RBP18.63■□□□□ 0.57
NPAS3-206ENST00000548645 ZNF71Q9NQZ8 489 aaPredicted RBP18.63■□□□□ 0.57
NPAS3-206ENST00000548645 ZNF137PP52743 207 aa18.63■□□□□ 0.57
NPAS3-206ENST00000548645 WT1-ASQ06250 92 aa18.63■□□□□ 0.57
NPAS3-206ENST00000548645 FAM231BA6NCW3 169 aa18.62■□□□□ 0.57
NPAS3-206ENST00000548645 LTAP01374 205 aa18.62■□□□□ 0.57
NPAS3-206ENST00000548645 IGHV3-48P01763 117 aa18.62■□□□□ 0.57
NPAS3-206ENST00000548645 SP9P0CG40 484 aa18.62■□□□□ 0.57
NPAS3-206ENST00000548645 C5orf17Q8NAS9 161 aa18.62■□□□□ 0.57
NPAS3-206ENST00000548645 H1FXQ92522 213 aaKnown RBP18.62■□□□□ 0.57
NPAS3-206ENST00000548645 SSUH2Q9Y2M2 353 aa18.62■□□□□ 0.57
NPAS3-206ENST00000548645 SLC25A15Q9Y619 301 aa18.62■□□□□ 0.57
NPAS3-206ENST00000548645 PRR33A8MZF0 331 aa18.62■□□□□ 0.57
NPAS3-206ENST00000548645 NBEAP1P0C6P0 100 aa18.62■□□□□ 0.57
NPAS3-206ENST00000548645 CCL13Q99616 98 aa18.62■□□□□ 0.57
NPAS3-206ENST00000548645 ZNF883P0CG24 379 aa18.61■□□□□ 0.57
NPAS3-206ENST00000548645 ORM2P19652 201 aa18.61■□□□□ 0.57
NPAS3-206ENST00000548645 GATA4P43694 442 aa18.61■□□□□ 0.57
NPAS3-206ENST00000548645 ALKBH2Q6NS38 261 aa18.61■□□□□ 0.57
NPAS3-206ENST00000548645 TMEM167AQ8TBQ9 72 aa18.61■□□□□ 0.57
NPAS3-206ENST00000548645 FLYWCH2Q96CP2 140 aaKnown RBP18.61■□□□□ 0.57
NPAS3-206ENST00000548645 DKK4Q9UBT3 224 aa18.61■□□□□ 0.57
NPAS3-206ENST00000548645 ZNF835Q9Y2P0 537 aa18.61■□□□□ 0.57
NPAS3-206ENST00000548645 PSG9Q00887 426 aa18.61■□□□□ 0.57
NPAS3-206ENST00000548645 VSTM2AQ8TAG5 236 aa18.61■□□□□ 0.57
NPAS3-206ENST00000548645 PROCRQ9UNN8 238 aa18.61■□□□□ 0.57
NPAS3-206ENST00000548645 ZCCHC24Q8N2G6 241 aaKnown RBP18.6■□□□□ 0.57
NPAS3-206ENST00000548645 OR4A5Q8NH83 315 aa18.6■□□□□ 0.57
NPAS3-206ENST00000548645 FAM216BQ8N7L0 139 aa18.6■□□□□ 0.57
NPAS3-206ENST00000548645 OR1B1Q8NGR6 318 aa18.6■□□□□ 0.57
NPAS3-206ENST00000548645 PEF1Q9UBV8 284 aaKnown RBP18.6■□□□□ 0.57
NPAS3-206ENST00000548645 KNTC1P50748 2209 aa18.6■□□□□ 0.57
NPAS3-206ENST00000548645 hADV38S2A0JD32 116 aa18.6■□□□□ 0.57
NPAS3-206ENST00000548645 VHLLQ6RSH7 139 aa18.6■□□□□ 0.57
NPAS3-206ENST00000548645 OR5AN1Q8NGI8 311 aa18.6■□□□□ 0.57
NPAS3-206ENST00000548645 A0A087X0K7 114 aa18.59■□□□□ 0.57
NPAS3-206ENST00000548645 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.59■□□□□ 0.57
NPAS3-206ENST00000548645 GPR183P32249 361 aa18.59■□□□□ 0.57
NPAS3-206ENST00000548645 GLRXP35754 106 aa18.59■□□□□ 0.57
NPAS3-206ENST00000548645 ZNF788Q6ZQV5 615 aa18.59■□□□□ 0.57
NPAS3-206ENST00000548645 MRPL36Q9P0J6 103 aaKnown RBP18.59■□□□□ 0.57
NPAS3-206ENST00000548645 FAM71F2Q6NXP2 309 aa18.59■□□□□ 0.57
NPAS3-206ENST00000548645 PMCHL2Q9BQD1 86 aa18.59■□□□□ 0.57
NPAS3-206ENST00000548645 H0Y8G0 127 aa18.58■□□□□ 0.57
NPAS3-206ENST00000548645 K7ERU9 68 aa18.58■□□□□ 0.57
NPAS3-206ENST00000548645 LINC01545Q5VT33 79 aa18.58■□□□□ 0.57
NPAS3-206ENST00000548645 CGB1A6NKQ9 187 aa18.58■□□□□ 0.56
NPAS3-206ENST00000548645 M0R1B8 84 aa18.58■□□□□ 0.56
NPAS3-206ENST00000548645 TCRAP04437 139 aa18.58■□□□□ 0.56
NPAS3-206ENST00000548645 CACNA1GO43497 2377 aa18.58■□□□□ 0.56
NPAS3-206ENST00000548645 GAGE12BA1L429 117 aa18.57■□□□□ 0.56
NPAS3-206ENST00000548645 ZNF138P52744 262 aa18.57■□□□□ 0.56
NPAS3-206ENST00000548645 C10orf55Q5SWW7 151 aa18.57■□□□□ 0.56
NPAS3-206ENST00000548645 OR4C13Q8NGP0 309 aa18.57■□□□□ 0.56
NPAS3-206ENST00000548645 SARAFQ96BY9 339 aa18.57■□□□□ 0.56
NPAS3-206ENST00000548645 HAX1O00165 279 aa18.57■□□□□ 0.56
NPAS3-206ENST00000548645 MCRIP2Q9BUT9 160 aaKnown RBP18.57■□□□□ 0.56
NPAS3-206ENST00000548645 TMUB1Q9BVT8 246 aa18.57■□□□□ 0.56
NPAS3-206ENST00000548645 LINC00312Q9Y6C7 94 aa18.57■□□□□ 0.56
NPAS3-206ENST00000548645 CACNA1HO95180 2353 aa18.57■□□□□ 0.56
NPAS3-206ENST00000548645 COX8AP10176 69 aa18.56■□□□□ 0.56
NPAS3-206ENST00000548645 COL8A1P27658 744 aa18.56■□□□□ 0.56
NPAS3-206ENST00000548645 TNFAIP6P98066 277 aaPredicted RBP18.56■□□□□ 0.56
NPAS3-206ENST00000548645 NPIPB6E9PJ23 425 aa18.56■□□□□ 0.56
NPAS3-206ENST00000548645 HTR1DP28221 377 aa18.56■□□□□ 0.56
NPAS3-206ENST00000548645 ARF6P62330 175 aa18.56■□□□□ 0.56
NPAS3-206ENST00000548645 Q9H3A6 140 aa18.56■□□□□ 0.56
NPAS3-206ENST00000548645 IGLV3-9A0A075B6K5 115 aa18.55■□□□□ 0.56
NPAS3-206ENST00000548645 TRAV8-6A0A0B4J262 113 aa18.55■□□□□ 0.56
NPAS3-206ENST00000548645 BPIFA4PQ86YQ2 179 aa18.55■□□□□ 0.56
NPAS3-206ENST00000548645 OR10X1Q8NGY0 326 aa18.55■□□□□ 0.56
NPAS3-206ENST00000548645 C22orf46C9J442 243 aa18.54■□□□□ 0.56
NPAS3-206ENST00000548645 NEU4Q8WWR8 484 aaPredicted RBP18.54■□□□□ 0.56
NPAS3-206ENST00000548645 GP9P14770 177 aa18.54■□□□□ 0.56
NPAS3-206ENST00000548645 TRGV9Q99603 122 aa18.54■□□□□ 0.56
NPAS3-206ENST00000548645 INTS1Q8N201 2190 aaKnown RBP18.54■□□□□ 0.56
NPAS3-206ENST00000548645 CSN3P07498 182 aa18.53■□□□□ 0.56
NPAS3-206ENST00000548645 SEC11AP67812 179 aa18.53■□□□□ 0.56
NPAS3-206ENST00000548645 C1orf210Q8IVY1 113 aa18.53■□□□□ 0.56
NPAS3-206ENST00000548645 TIMM8BQ9Y5J9 83 aaPredicted RBP18.53■□□□□ 0.56
NPAS3-206ENST00000548645 C7orf71A4D174 169 aa18.53■□□□□ 0.56
NPAS3-206ENST00000548645 LHFPL4Q7Z7J7 247 aa18.53■□□□□ 0.56
NPAS3-206ENST00000548645 AP5S1Q9NUS5 200 aa18.53■□□□□ 0.56
NPAS3-206ENST00000548645 CADP27708 2225 aa18.53■□□□□ 0.56
NPAS3-206ENST00000548645 APOHP02749 345 aaPredicted RBP18.53■□□□□ 0.56
NPAS3-206ENST00000548645 C2orf91Q6ZV80 131 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms