RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 LRTM2Q8N967 370 aa11.57□□□□□ -0.56
RAPGEF3-217ENST00000548434 C17orf77Q96MU5 243 aa11.57□□□□□ -0.56
RAPGEF3-217ENST00000548434 SCP2D1Q9UJQ7 156 aa11.57□□□□□ -0.56
RAPGEF3-217ENST00000548434 V9GYH0 126 aa11.57□□□□□ -0.56
RAPGEF3-217ENST00000548434 PKHD1P08F94 4074 aa11.56□□□□□ -0.56
RAPGEF3-217ENST00000548434 IGKV1OR2-108A0A075B7D4 117 aa11.56□□□□□ -0.56
RAPGEF3-217ENST00000548434 HELTA6NFD8 242 aa11.56□□□□□ -0.56
RAPGEF3-217ENST00000548434 FABP12A6NFH5 140 aa11.56□□□□□ -0.56
RAPGEF3-217ENST00000548434 H3BMM0 161 aa11.56□□□□□ -0.56
RAPGEF3-217ENST00000548434 IL4P05112 153 aa11.56□□□□□ -0.56
RAPGEF3-217ENST00000548434 RD3LP0DJH9 198 aa11.56□□□□□ -0.56
RAPGEF3-217ENST00000548434 GPX4P36969 197 aaPredicted RBP11.56□□□□□ -0.56
RAPGEF3-217ENST00000548434 DHRS2Q13268 280 aa11.56□□□□□ -0.56
RAPGEF3-217ENST00000548434 ZNF79Q15937 498 aa11.56□□□□□ -0.56
RAPGEF3-217ENST00000548434 ACTL10Q5JWF8 245 aa11.56□□□□□ -0.56
RAPGEF3-217ENST00000548434 DTD1Q8TEA8 209 aa11.56□□□□□ -0.56
RAPGEF3-217ENST00000548434 PRSS46E5RG02 174 aa11.55□□□□□ -0.56
RAPGEF3-217ENST00000548434 SOCS3O14543 225 aa11.55□□□□□ -0.56
RAPGEF3-217ENST00000548434 MIFP14174 115 aa11.55□□□□□ -0.56
RAPGEF3-217ENST00000548434 AKR1C4P17516 323 aa11.55□□□□□ -0.56
RAPGEF3-217ENST00000548434 AP2S1P53680 142 aaPredicted RBP11.55□□□□□ -0.56
RAPGEF3-217ENST00000548434 ATP5IP56385 69 aaPredicted RBP11.55□□□□□ -0.56
RAPGEF3-217ENST00000548434 ZNF90Q03938 601 aa11.55□□□□□ -0.56
RAPGEF3-217ENST00000548434 NOXA1Q86UR1 476 aa11.55□□□□□ -0.56
RAPGEF3-217ENST00000548434 LGI3Q8N145 548 aa11.55□□□□□ -0.56
RAPGEF3-217ENST00000548434 OR51G1Q8NGK1 321 aa11.55□□□□□ -0.56
RAPGEF3-217ENST00000548434 ACY3Q96HD9 319 aa11.55□□□□□ -0.56
RAPGEF3-217ENST00000548434 SCGB3A2Q96PL1 93 aa11.55□□□□□ -0.56
RAPGEF3-217ENST00000548434 NRN1Q9NPD7 142 aa11.55□□□□□ -0.56
RAPGEF3-217ENST00000548434 CLEC5AQ9NY25 188 aa11.55□□□□□ -0.56
RAPGEF3-217ENST00000548434 FBXL17Q9UF56 701 aa11.55□□□□□ -0.56
RAPGEF3-217ENST00000548434 SCGB2A1O75556 95 aa11.54□□□□□ -0.56
RAPGEF3-217ENST00000548434 TCTAP57738 103 aa11.54□□□□□ -0.56
RAPGEF3-217ENST00000548434 PSMG4Q5JS54 123 aa11.54□□□□□ -0.56
RAPGEF3-217ENST00000548434 GDF5OSQ5U4N7 250 aa11.54□□□□□ -0.56
RAPGEF3-217ENST00000548434 C2CD4CQ8TF44 421 aa11.54□□□□□ -0.56
RAPGEF3-217ENST00000548434 WDR12Q9GZL7 423 aaKnown RBP11.54□□□□□ -0.56
RAPGEF3-217ENST00000548434 CELA1Q9UNI1 258 aa11.54□□□□□ -0.56
RAPGEF3-217ENST00000548434 DUXBA0A1W2PPF3 345 aa11.53□□□□□ -0.56
RAPGEF3-217ENST00000548434 IFNA10P01566 189 aa11.53□□□□□ -0.56
RAPGEF3-217ENST00000548434 SLC25A6P12236 298 aa11.53□□□□□ -0.56
RAPGEF3-217ENST00000548434 HLA-DMBP28068 263 aa11.53□□□□□ -0.56
RAPGEF3-217ENST00000548434 DEFB1P60022 68 aa11.53□□□□□ -0.56
RAPGEF3-217ENST00000548434 TMEM128Q5BJH2 165 aa11.53□□□□□ -0.56
RAPGEF3-217ENST00000548434 OR8G2PQ6IF36 304 aa11.53□□□□□ -0.56
RAPGEF3-217ENST00000548434 SIGLEC15Q6ZMC9 328 aa11.53□□□□□ -0.56
RAPGEF3-217ENST00000548434 THAP8Q8NA92 274 aa11.53□□□□□ -0.56
RAPGEF3-217ENST00000548434 MCFD2Q8NI22 146 aa11.53□□□□□ -0.56
RAPGEF3-217ENST00000548434 RNF125Q96EQ8 232 aa11.53□□□□□ -0.56
RAPGEF3-217ENST00000548434 NARS2Q96I59 477 aaKnown RBP11.53□□□□□ -0.56
RAPGEF3-217ENST00000548434 CLUHP3Q96NS8 147 aa11.53□□□□□ -0.56
RAPGEF3-217ENST00000548434 KIAA1109Q2LD37 5005 aa11.53□□□□□ -0.56
RAPGEF3-217ENST00000548434 PKD1P98161 4303 aa11.52□□□□□ -0.56
RAPGEF3-217ENST00000548434 C11orf94C9JXX5 98 aa11.52□□□□□ -0.57
RAPGEF3-217ENST00000548434 IFNA4P05014 189 aa11.52□□□□□ -0.57
RAPGEF3-217ENST00000548434 HLA-DRB4P13762 266 aa11.52□□□□□ -0.57
RAPGEF3-217ENST00000548434 NKX2-1P43699 371 aaPredicted RBP11.52□□□□□ -0.57
RAPGEF3-217ENST00000548434 EIF2B2P49770 351 aaKnown RBP11.52□□□□□ -0.57
RAPGEF3-217ENST00000548434 C12orf74Q32Q52 190 aa11.52□□□□□ -0.57
RAPGEF3-217ENST00000548434 ZNF705AQ6ZN79 300 aaPredicted RBP11.52□□□□□ -0.57
RAPGEF3-217ENST00000548434 Q6ZTC4 211 aa11.52□□□□□ -0.57
RAPGEF3-217ENST00000548434 CCDC190Q86UF4 302 aa11.52□□□□□ -0.57
RAPGEF3-217ENST00000548434 RBM38Q9H0Z9 239 aaKnown RBP11.52□□□□□ -0.57
RAPGEF3-217ENST00000548434 MCUBQ9NWR8 336 aa11.52□□□□□ -0.57
RAPGEF3-217ENST00000548434 TBC1D24Q9ULP9 559 aa11.52□□□□□ -0.57
RAPGEF3-217ENST00000548434 HLA-DRB4X5D2U9 266 aa11.52□□□□□ -0.57
RAPGEF3-217ENST00000548434 ZNF705FA8MVS1 300 aaPredicted RBP11.51□□□□□ -0.57
RAPGEF3-217ENST00000548434 ZNF705DP0CH99 300 aaPredicted RBP11.51□□□□□ -0.57
RAPGEF3-217ENST00000548434 ZNF705BP0CI00 300 aaPredicted RBP11.51□□□□□ -0.57
RAPGEF3-217ENST00000548434 SRPXP78539 464 aa11.51□□□□□ -0.57
RAPGEF3-217ENST00000548434 GSG1LQ6UXU4 331 aa11.51□□□□□ -0.57
RAPGEF3-217ENST00000548434 TRGV9Q99603 122 aa11.51□□□□□ -0.57
RAPGEF3-217ENST00000548434 DYNC1H1Q14204 4646 aaKnown RBP11.51□□□□□ -0.57
RAPGEF3-217ENST00000548434 A8MTW9 85 aa11.5□□□□□ -0.57
RAPGEF3-217ENST00000548434 C1orf194Q5T5A4 169 aa11.5□□□□□ -0.57
RAPGEF3-217ENST00000548434 TMEM182Q6ZP80 229 aaPredicted RBP11.5□□□□□ -0.57
RAPGEF3-217ENST00000548434 ZNF709Q8N972 641 aa11.5□□□□□ -0.57
RAPGEF3-217ENST00000548434 DEDD2Q8WXF8 326 aa11.5□□□□□ -0.57
RAPGEF3-217ENST00000548434 NEU1Q99519 415 aa11.5□□□□□ -0.57
RAPGEF3-217ENST00000548434 IGLL5B9A064 214 aa11.49□□□□□ -0.57
RAPGEF3-217ENST00000548434 SFT2D2O95562 160 aa11.49□□□□□ -0.57
RAPGEF3-217ENST00000548434 SNRPD3P62318 126 aaKnown RBP11.49□□□□□ -0.57
RAPGEF3-217ENST00000548434 PPP1R1AQ13522 171 aa11.49□□□□□ -0.57
RAPGEF3-217ENST00000548434 OR1S1Q8NH92 325 aa11.49□□□□□ -0.57
RAPGEF3-217ENST00000548434 SLC25A21Q9BQT8 299 aaPredicted RBP11.49□□□□□ -0.57
RAPGEF3-217ENST00000548434 SCRT1Q9BWW7 348 aa11.49□□□□□ -0.57
RAPGEF3-217ENST00000548434 SAV1Q9H4B6 383 aaPredicted RBP11.49□□□□□ -0.57
RAPGEF3-217ENST00000548434 XCL2Q9UBD3 114 aa11.49□□□□□ -0.57
RAPGEF3-217ENST00000548434 ANXA3P12429 323 aa11.48□□□□□ -0.57
RAPGEF3-217ENST00000548434 TRAV10A0A0B4J240 114 aa11.47□□□□□ -0.57
RAPGEF3-217ENST00000548434 ZFP92A6NM28 416 aa11.47□□□□□ -0.57
RAPGEF3-217ENST00000548434 PMS2P5A8MQ11 134 aa11.47□□□□□ -0.57
RAPGEF3-217ENST00000548434 IAPPP10997 89 aa11.47□□□□□ -0.57
RAPGEF3-217ENST00000548434 PAX9P55771 341 aa11.47□□□□□ -0.57
RAPGEF3-217ENST00000548434 ID3Q02535 119 aa11.47□□□□□ -0.57
RAPGEF3-217ENST00000548434 PYDC2Q56P42 97 aa11.47□□□□□ -0.57
RAPGEF3-217ENST00000548434 TMED4Q7Z7H5 227 aa11.47□□□□□ -0.57
RAPGEF3-217ENST00000548434 TOMM5Q8N4H5 51 aa11.47□□□□□ -0.57
RAPGEF3-217ENST00000548434 C20orf173Q96LM9 149 aa11.47□□□□□ -0.57
RAPGEF3-217ENST00000548434 SDHCQ99643 169 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms