RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 ZMAT4Q9H898 229 aa13.95□□□□□ -0.18
PRPF40B-206ENST00000547764 U3KQE9 123 aa13.95□□□□□ -0.18
PRPF40B-206ENST00000547764 IGKV1OR2-108A0A075B7D4 117 aa13.94□□□□□ -0.18
PRPF40B-206ENST00000547764 PMS2P5A8MQ11 134 aa13.94□□□□□ -0.18
PRPF40B-206ENST00000547764 HNRNPCP07910 306 aaKnown RBP eCLIP13.94□□□□□ -0.18
PRPF40B-206ENST00000547764 P2RY1P47900 373 aa13.94□□□□□ -0.18
PRPF40B-206ENST00000547764 TAS2R30P59541 319 aa13.94□□□□□ -0.18
PRPF40B-206ENST00000547764 RPL11P62913 178 aaKnown RBP13.94□□□□□ -0.18
PRPF40B-206ENST00000547764 PAFAH1B2P68402 229 aa13.94□□□□□ -0.18
PRPF40B-206ENST00000547764 TMEM14EPQ6UXP3 125 aa13.94□□□□□ -0.18
PRPF40B-206ENST00000547764 THAP8Q8NA92 274 aa13.94□□□□□ -0.18
PRPF40B-206ENST00000547764 OR51G1Q8NGK1 321 aa13.94□□□□□ -0.18
PRPF40B-206ENST00000547764 C2orf50Q96LR7 162 aa13.94□□□□□ -0.18
PRPF40B-206ENST00000547764 RCHY1Q96PM5 261 aa13.94□□□□□ -0.18
PRPF40B-206ENST00000547764 TRGV9Q99603 122 aa13.94□□□□□ -0.18
PRPF40B-206ENST00000547764 GPN1Q9HCN4 374 aaPredicted RBP13.94□□□□□ -0.18
PRPF40B-206ENST00000547764 C7orf66A4D0T2 115 aa13.93□□□□□ -0.18
PRPF40B-206ENST00000547764 INMT-MINDY4F8WBC2 141 aa13.93□□□□□ -0.18
PRPF40B-206ENST00000547764 CCNKO75909 580 aa13.93□□□□□ -0.18
PRPF40B-206ENST00000547764 OR8G2PQ6IF36 304 aa13.93□□□□□ -0.18
PRPF40B-206ENST00000547764 ACOT7LQ6ZUV0 252 aa13.93□□□□□ -0.18
PRPF40B-206ENST00000547764 RNF125Q96EQ8 232 aa13.93□□□□□ -0.18
PRPF40B-206ENST00000547764 GRAMD2BQ96HH9 432 aa13.93□□□□□ -0.18
PRPF40B-206ENST00000547764 FAM110AQ9BQ89 295 aa13.93□□□□□ -0.18
PRPF40B-206ENST00000547764 MS4A6AQ9H2W1 248 aa13.93□□□□□ -0.18
PRPF40B-206ENST00000547764 TSC22D2O75157 780 aa13.92□□□□□ -0.18
PRPF40B-206ENST00000547764 FABP1P07148 127 aa13.92□□□□□ -0.18
PRPF40B-206ENST00000547764 METTL15P1P0C7V9 234 aa13.92□□□□□ -0.18
PRPF40B-206ENST00000547764 OR2F1Q13607 317 aa13.92□□□□□ -0.18
PRPF40B-206ENST00000547764 GSG1LQ6UXU4 331 aa13.92□□□□□ -0.18
PRPF40B-206ENST00000547764 WFDC3Q8IUB2 231 aa13.92□□□□□ -0.18
PRPF40B-206ENST00000547764 MARVELD1Q9BSK0 173 aa13.92□□□□□ -0.18
PRPF40B-206ENST00000547764 PBDC1Q9BVG4 233 aa13.92□□□□□ -0.18
PRPF40B-206ENST00000547764 RABAC1Q9UI14 185 aa13.92□□□□□ -0.18
PRPF40B-206ENST00000547764 LSM5Q9Y4Y9 91 aaKnown RBP13.92□□□□□ -0.18
PRPF40B-206ENST00000547764 SNRPGP15A8MWD9 76 aa13.91□□□□□ -0.18
PRPF40B-206ENST00000547764 K7EPK0 472 aa13.91□□□□□ -0.18
PRPF40B-206ENST00000547764 DNASE2O00115 360 aaPredicted RBP13.91□□□□□ -0.18
PRPF40B-206ENST00000547764 PRAF2O60831 178 aa13.91□□□□□ -0.18
PRPF40B-206ENST00000547764 AKR1C1Q04828 323 aa13.91□□□□□ -0.18
PRPF40B-206ENST00000547764 IL15RAQ13261 267 aa13.91□□□□□ -0.18
PRPF40B-206ENST00000547764 C16orf54Q6UWD8 224 aa13.91□□□□□ -0.18
PRPF40B-206ENST00000547764 WWC2-AS2Q96NR7 200 aa13.91□□□□□ -0.18
PRPF40B-206ENST00000547764 SPATA25Q9BR10 227 aa13.91□□□□□ -0.18
PRPF40B-206ENST00000547764 STAB2Q8WWQ8 2551 aa13.91□□□□□ -0.18
PRPF40B-206ENST00000547764 TENM3Q9P273 2699 aa13.9□□□□□ -0.18
PRPF40B-206ENST00000547764 LOC102724200A0A096LPH7 203 aaPredicted RBP13.9□□□□□ -0.18
PRPF40B-206ENST00000547764 TRAV2A0A0B4J234 112 aa13.9□□□□□ -0.18
PRPF40B-206ENST00000547764 L7N2F9 121 aa13.9□□□□□ -0.18
PRPF40B-206ENST00000547764 BUB3O43684 328 aa13.9□□□□□ -0.18
PRPF40B-206ENST00000547764 CMC4P56277 68 aaPredicted RBP13.9□□□□□ -0.18
PRPF40B-206ENST00000547764 LYZP61626 148 aa13.9□□□□□ -0.18
PRPF40B-206ENST00000547764 VAMP2P63027 116 aa13.9□□□□□ -0.18
PRPF40B-206ENST00000547764 TMEM144Q7Z5S9 345 aa13.9□□□□□ -0.18
PRPF40B-206ENST00000547764 OR10P1Q8NGE3 313 aa13.9□□□□□ -0.18
PRPF40B-206ENST00000547764 GLMPQ8WWB7 406 aa13.9□□□□□ -0.18
PRPF40B-206ENST00000547764 GGTLC1Q9BX51 225 aa13.9□□□□□ -0.18
PRPF40B-206ENST00000547764 SMCO3A2RU48 225 aa13.89□□□□□ -0.19
PRPF40B-206ENST00000547764 EIF2B2P49770 351 aaKnown RBP13.89□□□□□ -0.19
PRPF40B-206ENST00000547764 RRAS2P62070 204 aaPredicted RBP13.89□□□□□ -0.19
PRPF40B-206ENST00000547764 DLK1P80370 383 aa13.89□□□□□ -0.19
PRPF40B-206ENST00000547764 APRG1Q8IVJ8 170 aa13.89□□□□□ -0.19
PRPF40B-206ENST00000547764 STXBP6Q8NFX7 210 aa13.89□□□□□ -0.19
PRPF40B-206ENST00000547764 C11orf1Q9H5F2 150 aa13.89□□□□□ -0.19
PRPF40B-206ENST00000547764 MAP6D1Q9H9H5 199 aa13.89□□□□□ -0.19
PRPF40B-206ENST00000547764 NBEAL2Q6ZNJ1 2754 aa13.88□□□□□ -0.19
PRPF40B-206ENST00000547764 HELTA6NFD8 242 aa13.88□□□□□ -0.19
PRPF40B-206ENST00000547764 ARL16Q0P5N6 197 aa13.88□□□□□ -0.19
PRPF40B-206ENST00000547764 RAB32Q13637 225 aa13.88□□□□□ -0.19
PRPF40B-206ENST00000547764 ZNF124Q15973 351 aa13.88□□□□□ -0.19
PRPF40B-206ENST00000547764 TMEM182Q6ZP80 229 aaPredicted RBP13.88□□□□□ -0.19
PRPF40B-206ENST00000547764 FAM24BQ8N5W8 94 aa13.88□□□□□ -0.19
PRPF40B-206ENST00000547764 RETNQ9HD89 108 aa13.88□□□□□ -0.19
PRPF40B-206ENST00000547764 K7EQG2 157 aa13.87□□□□□ -0.19
PRPF40B-206ENST00000547764 GOSR2O14653 212 aa13.87□□□□□ -0.19
PRPF40B-206ENST00000547764 SIX6O95475 246 aa13.87□□□□□ -0.19
PRPF40B-206ENST00000547764 CFDP00746 253 aaPredicted RBP13.87□□□□□ -0.19
PRPF40B-206ENST00000547764 GATA2P23769 480 aaPredicted RBP13.87□□□□□ -0.19
PRPF40B-206ENST00000547764 BCAP31P51572 246 aa13.87□□□□□ -0.19
PRPF40B-206ENST00000547764 AP2S1P53680 142 aaPredicted RBP13.87□□□□□ -0.19
PRPF40B-206ENST00000547764 S100A10P60903 97 aa13.87□□□□□ -0.19
PRPF40B-206ENST00000547764 STPG3Q8N7X2 389 aa13.87□□□□□ -0.19
PRPF40B-206ENST00000547764 FNDC10F2Z333 226 aa13.86□□□□□ -0.19
PRPF40B-206ENST00000547764 PVALBP20472 110 aaPredicted RBP13.86□□□□□ -0.19
PRPF40B-206ENST00000547764 NUP62P37198 522 aaPredicted RBP13.86□□□□□ -0.19
PRPF40B-206ENST00000547764 CAV2P51636 162 aa13.86□□□□□ -0.19
PRPF40B-206ENST00000547764 BPIFCQ8NFQ6 507 aa13.86□□□□□ -0.19
PRPF40B-206ENST00000547764 DCANP1Q8TF63 244 aa13.86□□□□□ -0.19
PRPF40B-206ENST00000547764 NPVFQ9HCQ7 196 aa13.86□□□□□ -0.19
PRPF40B-206ENST00000547764 MGAT4CQ9UBM8 478 aa13.86□□□□□ -0.19
PRPF40B-206ENST00000547764 PFDN2Q9UHV9 154 aa13.86□□□□□ -0.19
PRPF40B-206ENST00000547764 FAM24AA6NFZ4 105 aa13.85□□□□□ -0.19
PRPF40B-206ENST00000547764 DEFB131AP59861 70 aa13.85□□□□□ -0.19
PRPF40B-206ENST00000547764 SIGLEC15Q6ZMC9 328 aa13.85□□□□□ -0.19
PRPF40B-206ENST00000547764 CYP2G1PQ6ZSU1 146 aa13.85□□□□□ -0.19
PRPF40B-206ENST00000547764 DEDDO75618 318 aa13.84□□□□□ -0.19
PRPF40B-206ENST00000547764 RPL35AP18077 110 aaKnown RBP13.84□□□□□ -0.19
PRPF40B-206ENST00000547764 LEMD1Q68G75 181 aa13.84□□□□□ -0.19
PRPF40B-206ENST00000547764 PPP1R14BQ96C90 147 aa13.84□□□□□ -0.19
PRPF40B-206ENST00000547764 GGACTQ9BVM4 153 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms