RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 OR51B2Q9Y5P1 312 aa6.67□□□□□ -1.34
VPS29-203ENST00000546588 UNC79Q9P2D8 2635 aa6.66□□□□□ -1.34
VPS29-203ENST00000546588 RPS10-NUDT3A0A1W2PQS6 291 aa6.66□□□□□ -1.34
VPS29-203ENST00000546588 IGLC7A0M8Q6 106 aa6.66□□□□□ -1.34
VPS29-203ENST00000546588 FAM24AA6NFZ4 105 aa6.66□□□□□ -1.34
VPS29-203ENST00000546588 PLXNB1O43157 2135 aa6.66□□□□□ -1.34
VPS29-203ENST00000546588 CFDP00746 253 aaPredicted RBP6.66□□□□□ -1.34
VPS29-203ENST00000546588 IFNA7P01567 189 aa6.66□□□□□ -1.34
VPS29-203ENST00000546588 IFNA17P01571 189 aa6.66□□□□□ -1.34
VPS29-203ENST00000546588 IGKV1D-33P01593 117 aa6.66□□□□□ -1.34
VPS29-203ENST00000546588 IGKV1-33P01594 117 aa6.66□□□□□ -1.34
VPS29-203ENST00000546588 FAM106CPP0CH98 169 aa6.66□□□□□ -1.34
VPS29-203ENST00000546588 IGHV4-38-2P0DP08 117 aa6.66□□□□□ -1.34
VPS29-203ENST00000546588 SPP1P10451 314 aa6.66□□□□□ -1.34
VPS29-203ENST00000546588 TPT1P13693 172 aaKnown RBP6.66□□□□□ -1.34
VPS29-203ENST00000546588 CRYBA4P53673 196 aa6.66□□□□□ -1.34
VPS29-203ENST00000546588 HBG1P69891 147 aa6.66□□□□□ -1.34
VPS29-203ENST00000546588 HBG2P69892 147 aa6.66□□□□□ -1.34
VPS29-203ENST00000546588 PRB3Q04118 309 aaPredicted RBP6.66□□□□□ -1.34
VPS29-203ENST00000546588 EXOSC2Q13868 293 aaKnown RBP6.66□□□□□ -1.34
VPS29-203ENST00000546588 CLLU1Q5K131 121 aa6.66□□□□□ -1.34
VPS29-203ENST00000546588 SSX7Q7RTT5 188 aa6.66□□□□□ -1.34
VPS29-203ENST00000546588 BAP18Q8IXM2 172 aa6.66□□□□□ -1.34
VPS29-203ENST00000546588 WFDC11Q8NEX6 87 aa6.66□□□□□ -1.34
VPS29-203ENST00000546588 PINX1Q96BK5 328 aaKnown RBP6.66□□□□□ -1.34
VPS29-203ENST00000546588 ATP5SQ99766 215 aa6.66□□□□□ -1.34
VPS29-203ENST00000546588 C20orf24Q9BUV8 137 aa6.66□□□□□ -1.34
VPS29-203ENST00000546588 TMEM231Q9H6L2 316 aa6.66□□□□□ -1.34
VPS29-203ENST00000546588 WFDC1Q9HC57 220 aa6.66□□□□□ -1.34
VPS29-203ENST00000546588 MED9Q9NWA0 146 aa6.66□□□□□ -1.34
VPS29-203ENST00000546588 AURKAIP1Q9NWT8 199 aaPredicted RBP6.66□□□□□ -1.34
VPS29-203ENST00000546588 PSENENQ9NZ42 101 aa6.66□□□□□ -1.34
VPS29-203ENST00000546588 HILPDAQ9Y5L2 63 aa6.66□□□□□ -1.34
VPS29-203ENST00000546588 SVEP1Q4LDE5 3571 aa6.65□□□□□ -1.34
VPS29-203ENST00000546588 IGHV3-72A0A0B4J1Y9 119 aa6.65□□□□□ -1.34
VPS29-203ENST00000546588 TEX22C9J3V5 150 aa6.65□□□□□ -1.34
VPS29-203ENST00000546588 E7EUB6 86 aa6.65□□□□□ -1.34
VPS29-203ENST00000546588 SOX15O60248 233 aa6.65□□□□□ -1.34
VPS29-203ENST00000546588 CD5P06127 495 aa6.65□□□□□ -1.34
VPS29-203ENST00000546588 SEC11BP0C7V7 166 aa6.65□□□□□ -1.34
VPS29-203ENST00000546588 RNASE2P10153 161 aaKnown RBP6.65□□□□□ -1.34
VPS29-203ENST00000546588 CNTFRP26992 372 aa6.65□□□□□ -1.34
VPS29-203ENST00000546588 CAV2P51636 162 aa6.65□□□□□ -1.34
VPS29-203ENST00000546588 F2RL1P55085 397 aa6.65□□□□□ -1.34
VPS29-203ENST00000546588 DLK1P80370 383 aa6.65□□□□□ -1.34
VPS29-203ENST00000546588 WT1-ASQ06250 92 aa6.65□□□□□ -1.34
VPS29-203ENST00000546588 ZNF616Q08AN1 781 aa6.65□□□□□ -1.34
VPS29-203ENST00000546588 ARL16Q0P5N6 197 aa6.65□□□□□ -1.34
VPS29-203ENST00000546588 MMDQ15546 238 aa6.65□□□□□ -1.34
VPS29-203ENST00000546588 RNASEKQ6P5S7 137 aaKnown RBP6.65□□□□□ -1.34
VPS29-203ENST00000546588 Q8N9W7 124 aa6.65□□□□□ -1.34
VPS29-203ENST00000546588 OR5C1Q8NGR4 320 aa6.65□□□□□ -1.34
VPS29-203ENST00000546588 PSMG3Q9BT73 122 aaPredicted RBP6.65□□□□□ -1.34
VPS29-203ENST00000546588 COMMD5Q9GZQ3 224 aa6.65□□□□□ -1.34
VPS29-203ENST00000546588 PLEKHA3Q9HB20 300 aa6.65□□□□□ -1.34
VPS29-203ENST00000546588 C1RLQ9NZP8 487 aa6.65□□□□□ -1.34
VPS29-203ENST00000546588 METTL1Q9UBP6 276 aaKnown RBP6.65□□□□□ -1.34
VPS29-203ENST00000546588 NAV3Q8IVL0 2385 aa6.65□□□□□ -1.35
VPS29-203ENST00000546588 BORCS7-ASMTA0A0B4J1R7 106 aa6.64□□□□□ -1.35
VPS29-203ENST00000546588 A6NDX4 124 aa6.64□□□□□ -1.35
VPS29-203ENST00000546588 GAGE10A6NGK3 116 aa6.64□□□□□ -1.35
VPS29-203ENST00000546588 CEBPZOSA8MTT3 80 aa6.64□□□□□ -1.35
VPS29-203ENST00000546588 CD5LO43866 347 aa6.64□□□□□ -1.35
VPS29-203ENST00000546588 NPSP0C0P6 89 aa6.64□□□□□ -1.35
VPS29-203ENST00000546588 OR10J4P0C629 311 aa6.64□□□□□ -1.35
VPS29-203ENST00000546588 IAPPP10997 89 aa6.64□□□□□ -1.35
VPS29-203ENST00000546588 NPY1RP25929 384 aa6.64□□□□□ -1.35
VPS29-203ENST00000546588 RPS20P60866 119 aaKnown RBP6.64□□□□□ -1.35
VPS29-203ENST00000546588 PJVKQ0ZLH3 352 aa6.64□□□□□ -1.35
VPS29-203ENST00000546588 LRRC75BQ2VPJ9 315 aa6.64□□□□□ -1.35
VPS29-203ENST00000546588 GCSAMLQ5JQS6 135 aa6.64□□□□□ -1.35
VPS29-203ENST00000546588 RPL7L1Q6DKI1 246 aaKnown RBP6.64□□□□□ -1.35
VPS29-203ENST00000546588 EIF5AL1Q6IS14 154 aaKnown RBP6.64□□□□□ -1.35
VPS29-203ENST00000546588 ERASQ7Z444 233 aa6.64□□□□□ -1.35
VPS29-203ENST00000546588 C5orf56Q8N8D9 126 aa6.64□□□□□ -1.35
VPS29-203ENST00000546588 OR1S2Q8NGQ3 325 aa6.64□□□□□ -1.35
VPS29-203ENST00000546588 OR2G3Q8NGZ4 309 aa6.64□□□□□ -1.35
VPS29-203ENST00000546588 LYPD6BQ8NI32 183 aa6.64□□□□□ -1.35
VPS29-203ENST00000546588 RNASEH2CQ8TDP1 164 aaKnown RBP6.64□□□□□ -1.35
VPS29-203ENST00000546588 SRSF12Q8WXF0 261 aaKnown RBP6.64□□□□□ -1.35
VPS29-203ENST00000546588 NDUFAF3Q9BU61 184 aa6.64□□□□□ -1.35
VPS29-203ENST00000546588 ZNF471Q9BX82 626 aaPredicted RBP6.64□□□□□ -1.35
VPS29-203ENST00000546588 KRTAP3-1Q9BYR8 98 aa6.64□□□□□ -1.35
VPS29-203ENST00000546588 KIAA1456Q9P272 454 aa6.64□□□□□ -1.35
VPS29-203ENST00000546588 FBXO7Q9Y3I1 522 aa6.64□□□□□ -1.35
VPS29-203ENST00000546588 LSM4Q9Y4Z0 139 aaKnown RBP6.64□□□□□ -1.35
VPS29-203ENST00000546588 TIMM9Q9Y5J7 89 aa6.64□□□□□ -1.35
VPS29-203ENST00000546588 TSSC4Q9Y5U2 329 aaPredicted RBP6.64□□□□□ -1.35
VPS29-203ENST00000546588 ABCA12Q86UK0 2595 aa6.64□□□□□ -1.35
VPS29-203ENST00000546588 MED13LQ71F56 2210 aa6.64□□□□□ -1.35
VPS29-203ENST00000546588 ITPR3Q14573 2671 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 ITPR2Q14571 2701 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 A0A1W2PRD5 423 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 A0A1W2PRF3 423 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 A0A1W2PRM7 423 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 A8MZ25 164 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 H3BP45 60 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 M0R143 59 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 CORTO00230 105 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 CYB5BO43169 146 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms