RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 FSTL3O95633 263 aa9.42□□□□□ -0.9
CCDC38-202ENST00000546386 EGR2P11161 476 aaPredicted RBP9.42□□□□□ -0.9
CCDC38-202ENST00000546386 RPS10P46783 165 aaKnown RBP9.42□□□□□ -0.9
CCDC38-202ENST00000546386 OR1P1Q8NH06 330 aa9.42□□□□□ -0.9
CCDC38-202ENST00000546386 SETXQ7Z333 2677 aaKnown RBP9.42□□□□□ -0.9
CCDC38-202ENST00000546386 TCRBV4S1A1TA0A5B7 111 aa9.42□□□□□ -0.9
CCDC38-202ENST00000546386 H3BUX3 64 aa9.42□□□□□ -0.9
CCDC38-202ENST00000546386 FAM106CPP0CH98 169 aa9.42□□□□□ -0.9
CCDC38-202ENST00000546386 CTRB1P17538 263 aa9.42□□□□□ -0.9
CCDC38-202ENST00000546386 RPL23P62829 140 aaKnown RBP9.42□□□□□ -0.9
CCDC38-202ENST00000546386 SLC35B1P78383 322 aa9.42□□□□□ -0.9
CCDC38-202ENST00000546386 CTRB2Q6GPI1 263 aa9.42□□□□□ -0.9
CCDC38-202ENST00000546386 SDF2L1Q9HCN8 221 aa9.42□□□□□ -0.9
CCDC38-202ENST00000546386 I3L2K1 104 aa9.41□□□□□ -0.9
CCDC38-202ENST00000546386 SLC17A3O00476 420 aa9.41□□□□□ -0.9
CCDC38-202ENST00000546386 MSMBP08118 114 aa9.41□□□□□ -0.9
CCDC38-202ENST00000546386 TMEM241Q24JQ0 296 aa9.41□□□□□ -0.9
CCDC38-202ENST00000546386 Q56UQ5 140 aa9.41□□□□□ -0.9
CCDC38-202ENST00000546386 UNQ5815/PRO19632Q6UWF5 114 aa9.41□□□□□ -0.9
CCDC38-202ENST00000546386 CIARTQ8N365 385 aaPredicted RBP9.41□□□□□ -0.9
CCDC38-202ENST00000546386 FANCD2OSQ96PS1 177 aa9.41□□□□□ -0.9
CCDC38-202ENST00000546386 OR5B12Q96R08 314 aa9.41□□□□□ -0.9
CCDC38-202ENST00000546386 IGKV1-17P01599 117 aa9.41□□□□□ -0.9
CCDC38-202ENST00000546386 C16orf82Q7Z2V1 217 aa9.41□□□□□ -0.9
CCDC38-202ENST00000546386 ZNF329Q86UD4 541 aa9.41□□□□□ -0.9
CCDC38-202ENST00000546386 RNASEH2CQ8TDP1 164 aaKnown RBP9.41□□□□□ -0.9
CCDC38-202ENST00000546386 RASL11BQ9BPW5 248 aa9.41□□□□□ -0.9
CCDC38-202ENST00000546386 GNB4Q9HAV0 340 aa9.41□□□□□ -0.9
CCDC38-202ENST00000546386 TEP1Q99973 2627 aaKnown RBP9.41□□□□□ -0.9
CCDC38-202ENST00000546386 IL4P05112 153 aa9.4□□□□□ -0.9
CCDC38-202ENST00000546386 CACNG8Q8WXS5 425 aa9.4□□□□□ -0.9
CCDC38-202ENST00000546386 MALSU1Q96EH3 234 aa9.4□□□□□ -0.9
CCDC38-202ENST00000546386 FAM167A-AS1Q96KT0 104 aa9.4□□□□□ -0.9
CCDC38-202ENST00000546386 PSMB11A5LHX3 300 aa9.4□□□□□ -0.9
CCDC38-202ENST00000546386 CA1P00915 261 aaPredicted RBP9.4□□□□□ -0.9
CCDC38-202ENST00000546386 IGLC1P0CG04 106 aa9.4□□□□□ -0.9
CCDC38-202ENST00000546386 CCDC144NLQ6NUI1 221 aa9.4□□□□□ -0.9
CCDC38-202ENST00000546386 ZNF562Q6V9R5 426 aa9.4□□□□□ -0.9
CCDC38-202ENST00000546386 OCC1Q8TAD7 63 aa9.4□□□□□ -0.9
CCDC38-202ENST00000546386 PIFOQ8TCI5 191 aa9.4□□□□□ -0.9
CCDC38-202ENST00000546386 CHRDL1Q9BU40 450 aa9.4□□□□□ -0.9
CCDC38-202ENST00000546386 IGHV1-69DA0A0B4J2H0 117 aa9.39□□□□□ -0.91
CCDC38-202ENST00000546386 GNG7O60262 68 aa9.39□□□□□ -0.91
CCDC38-202ENST00000546386 NDUFA3O95167 84 aa9.39□□□□□ -0.91
CCDC38-202ENST00000546386 IGHV1-69P01742 117 aa9.39□□□□□ -0.91
CCDC38-202ENST00000546386 IGHV3-11P01762 117 aa9.39□□□□□ -0.91
CCDC38-202ENST00000546386 FRMD6-AS1P0C7T7 363 aa9.39□□□□□ -0.91
CCDC38-202ENST00000546386 RD3LP0DJH9 198 aa9.39□□□□□ -0.91
CCDC38-202ENST00000546386 RPL35P42766 123 aaKnown RBP9.39□□□□□ -0.91
CCDC38-202ENST00000546386 AKR1D1P51857 326 aa9.39□□□□□ -0.91
CCDC38-202ENST00000546386 SSTP61278 116 aa9.39□□□□□ -0.91
CCDC38-202ENST00000546386 PAX8Q06710 450 aa9.39□□□□□ -0.91
CCDC38-202ENST00000546386 ELOBQ15370 118 aa9.39□□□□□ -0.91
CCDC38-202ENST00000546386 SMUG1Q53HV7 270 aa9.39□□□□□ -0.91
CCDC38-202ENST00000546386 PDZD11Q5EBL8 140 aa9.39□□□□□ -0.91
CCDC38-202ENST00000546386 C10orf99Q6UWK7 81 aa9.39□□□□□ -0.91
CCDC38-202ENST00000546386 EXOC3-AS1Q8N2X6 119 aa9.39□□□□□ -0.91
CCDC38-202ENST00000546386 SPOCK3Q9BQ16 436 aa9.39□□□□□ -0.91
CCDC38-202ENST00000546386 TRAV8-1A0A0A6YYK1 113 aa9.39□□□□□ -0.91
CCDC38-202ENST00000546386 A0A1W2PPQ1 181 aa9.39□□□□□ -0.91
CCDC38-202ENST00000546386 VWC2LB2RUY7 222 aa9.39□□□□□ -0.91
CCDC38-202ENST00000546386 C8orf88P0DMB2 117 aa9.39□□□□□ -0.91
CCDC38-202ENST00000546386 FCGR2BP31994 310 aaPredicted RBP9.39□□□□□ -0.91
CCDC38-202ENST00000546386 GPR183P32249 361 aa9.39□□□□□ -0.91
CCDC38-202ENST00000546386 GPX4P36969 197 aaPredicted RBP9.39□□□□□ -0.91
CCDC38-202ENST00000546386 PRR27Q6MZM9 219 aa9.39□□□□□ -0.91
CCDC38-202ENST00000546386 C1orf122Q6ZSJ8 110 aa9.39□□□□□ -0.91
CCDC38-202ENST00000546386 NPBQ8NG41 125 aa9.39□□□□□ -0.91
CCDC38-202ENST00000546386 PAXXQ9BUH6 204 aa9.39□□□□□ -0.91
CCDC38-202ENST00000546386 MANBALQ9NQG1 85 aa9.39□□□□□ -0.91
CCDC38-202ENST00000546386 TECRQ9NZ01 308 aaKnown RBP9.39□□□□□ -0.91
CCDC38-202ENST00000546386 AMY1AP04745 511 aa9.38□□□□□ -0.91
CCDC38-202ENST00000546386 MGST1P10620 155 aaKnown RBP9.38□□□□□ -0.91
CCDC38-202ENST00000546386 RPL15P61313 204 aaKnown RBP9.38□□□□□ -0.91
CCDC38-202ENST00000546386 C15orf32Q32M92 178 aa9.38□□□□□ -0.91
CCDC38-202ENST00000546386 PQLC2Q6ZP29 291 aa9.38□□□□□ -0.91
CCDC38-202ENST00000546386 C1QL4Q86Z23 238 aa9.38□□□□□ -0.91
CCDC38-202ENST00000546386 Q96MF0 132 aa9.38□□□□□ -0.91
CCDC38-202ENST00000546386 RNASE7Q9H1E1 156 aaKnown RBP9.38□□□□□ -0.91
CCDC38-202ENST00000546386 FBXL7Q9UJT9 491 aa9.38□□□□□ -0.91
CCDC38-202ENST00000546386 PPP5D1E7EU14 171 aa9.38□□□□□ -0.91
CCDC38-202ENST00000546386 K7EN84 100 aa9.38□□□□□ -0.91
CCDC38-202ENST00000546386 RAB5AP20339 215 aa9.38□□□□□ -0.91
CCDC38-202ENST00000546386 SNRPEP62304 92 aaKnown RBP9.38□□□□□ -0.91
CCDC38-202ENST00000546386 RHEBQ15382 184 aa9.38□□□□□ -0.91
CCDC38-202ENST00000546386 Q8N6K4 173 aa9.38□□□□□ -0.91
CCDC38-202ENST00000546386 TMEM116Q8NCL8 245 aa9.38□□□□□ -0.91
CCDC38-202ENST00000546386 KLF2Q9Y5W3 355 aaPredicted RBP9.38□□□□□ -0.91
CCDC38-202ENST00000546386 FN1P02751 2386 aaKnown RBP9.38□□□□□ -0.91
CCDC38-202ENST00000546386 IGHV4-59P01825 116 aa9.37□□□□□ -0.91
CCDC38-202ENST00000546386 TRGC2P03986 189 aa9.37□□□□□ -0.91
CCDC38-202ENST00000546386 CLEC3BP05452 202 aa9.37□□□□□ -0.91
CCDC38-202ENST00000546386 BRS3P32247 399 aa9.37□□□□□ -0.91
CCDC38-202ENST00000546386 TCL1AP56279 114 aa9.37□□□□□ -0.91
CCDC38-202ENST00000546386 USF2Q15853 346 aaPredicted RBP9.37□□□□□ -0.91
CCDC38-202ENST00000546386 Q5PR19 223 aa9.37□□□□□ -0.91
CCDC38-202ENST00000546386 CLEC19AQ6UXS0 136 aa9.37□□□□□ -0.91
CCDC38-202ENST00000546386 LINC01551Q86U37 167 aa9.37□□□□□ -0.91
CCDC38-202ENST00000546386 WFDC11Q8NEX6 87 aa9.37□□□□□ -0.91
CCDC38-202ENST00000546386 OR51M1Q9H341 326 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms