RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 FAM181BA6NEQ2 426 aa11.91□□□□□ -0.5
HOXC11-202ENST00000546378 COL8A1P27658 744 aa11.91□□□□□ -0.5
HOXC11-202ENST00000546378 KIR2DL2P43627 348 aaPredicted RBP11.91□□□□□ -0.5
HOXC11-202ENST00000546378 KLF3P57682 345 aaPredicted RBP11.91□□□□□ -0.5
HOXC11-202ENST00000546378 CHRDL1Q9BU40 450 aa11.91□□□□□ -0.5
HOXC11-202ENST00000546378 CELSR1Q9NYQ6 3014 aa11.91□□□□□ -0.5
HOXC11-202ENST00000546378 TEX50A0A1B0GTY4 177 aa11.91□□□□□ -0.5
HOXC11-202ENST00000546378 ERHP84090 104 aaKnown RBP11.91□□□□□ -0.5
HOXC11-202ENST00000546378 C18orf15Q96N68 181 aa11.91□□□□□ -0.5
HOXC11-202ENST00000546378 C20orf144Q9BQM9 153 aa11.91□□□□□ -0.5
HOXC11-202ENST00000546378 TMEM167BQ9NRX6 74 aa11.91□□□□□ -0.5
HOXC11-202ENST00000546378 ACACBO00763 2458 aa11.91□□□□□ -0.5
HOXC11-202ENST00000546378 LEPROTL1O95214 131 aa11.91□□□□□ -0.5
HOXC11-202ENST00000546378 BTF3P20290 206 aaKnown RBP11.91□□□□□ -0.5
HOXC11-202ENST00000546378 PRSS57Q6UWY2 283 aa11.91□□□□□ -0.5
HOXC11-202ENST00000546378 C22orf34Q6ZV56 151 aa11.91□□□□□ -0.5
HOXC11-202ENST00000546378 GOLT1AQ6ZVE7 132 aa11.91□□□□□ -0.5
HOXC11-202ENST00000546378 PDPNQ86YL7 162 aa11.91□□□□□ -0.5
HOXC11-202ENST00000546378 SARAFQ96BY9 339 aa11.91□□□□□ -0.5
HOXC11-202ENST00000546378 WDR73Q6P4I2 378 aa11.9□□□□□ -0.5
HOXC11-202ENST00000546378 FAM222BQ8WU58 562 aa11.9□□□□□ -0.5
HOXC11-202ENST00000546378 RITA1Q96K30 269 aa11.9□□□□□ -0.5
HOXC11-202ENST00000546378 NPIPB11E5RHQ5 1161 aa11.9□□□□□ -0.5
HOXC11-202ENST00000546378 MPDU1O75352 247 aa11.9□□□□□ -0.5
HOXC11-202ENST00000546378 P0C879 139 aa11.9□□□□□ -0.5
HOXC11-202ENST00000546378 CNTFRP26992 372 aa11.9□□□□□ -0.5
HOXC11-202ENST00000546378 PRRX1P54821 245 aa11.9□□□□□ -0.5
HOXC11-202ENST00000546378 FBLN7Q53RD9 439 aa11.9□□□□□ -0.5
HOXC11-202ENST00000546378 Q6ZT83 130 aa11.9□□□□□ -0.5
HOXC11-202ENST00000546378 FNDC4Q9H6D8 234 aaPredicted RBP11.9□□□□□ -0.5
HOXC11-202ENST00000546378 J3KRW8 73 aa11.89□□□□□ -0.51
HOXC11-202ENST00000546378 GOSR1O95249 250 aa11.89□□□□□ -0.51
HOXC11-202ENST00000546378 P01737 135 aa11.89□□□□□ -0.51
HOXC11-202ENST00000546378 HLA-DQA1P01909 254 aa11.89□□□□□ -0.51
HOXC11-202ENST00000546378 KLF17Q5JT82 389 aaPredicted RBP11.89□□□□□ -0.51
HOXC11-202ENST00000546378 CENPVQ7Z7K6 275 aaPredicted RBP11.89□□□□□ -0.51
HOXC11-202ENST00000546378 C22orf15Q8WYQ4 148 aa11.89□□□□□ -0.51
HOXC11-202ENST00000546378 NEUROG1Q92886 237 aa11.89□□□□□ -0.51
HOXC11-202ENST00000546378 RAXQ9Y2V3 346 aa11.89□□□□□ -0.51
HOXC11-202ENST00000546378 TBR1Q16650 682 aa11.89□□□□□ -0.51
HOXC11-202ENST00000546378 LINC00322Q6ZN03 302 aaPredicted RBP11.89□□□□□ -0.51
HOXC11-202ENST00000546378 WDR31Q8NA23 367 aa11.89□□□□□ -0.51
HOXC11-202ENST00000546378 AP1S3Q96PC3 154 aa11.89□□□□□ -0.51
HOXC11-202ENST00000546378 TNFRSF19Q9NS68 423 aa11.89□□□□□ -0.51
HOXC11-202ENST00000546378 PEX7O00628 323 aa11.89□□□□□ -0.51
HOXC11-202ENST00000546378 ZNF207O43670 478 aaKnown RBP11.89□□□□□ -0.51
HOXC11-202ENST00000546378 FOXE3Q13461 319 aa11.89□□□□□ -0.51
HOXC11-202ENST00000546378 BHLHA15Q7RTS1 189 aaPredicted RBP11.89□□□□□ -0.51
HOXC11-202ENST00000546378 GNB1LQ9BYB4 327 aa11.89□□□□□ -0.51
HOXC11-202ENST00000546378 YPEL1O60688 119 aa11.88□□□□□ -0.51
HOXC11-202ENST00000546378 LOXL3P58215 753 aa11.88□□□□□ -0.51
HOXC11-202ENST00000546378 YPEL2Q96QA6 119 aa11.88□□□□□ -0.51
HOXC11-202ENST00000546378 SLC25A33Q9BSK2 321 aa11.88□□□□□ -0.51
HOXC11-202ENST00000546378 INO80CQ6PI98 192 aaPredicted RBP11.88□□□□□ -0.51
HOXC11-202ENST00000546378 SFXN3Q9BWM7 321 aa11.88□□□□□ -0.51
HOXC11-202ENST00000546378 PTPRBP23467 1997 aa11.88□□□□□ -0.51
HOXC11-202ENST00000546378 CGB1A6NKQ9 187 aa11.87□□□□□ -0.51
HOXC11-202ENST00000546378 OR5AL1P0C617 328 aa11.87□□□□□ -0.51
HOXC11-202ENST00000546378 CT45A6P0DMU7 189 aa11.87□□□□□ -0.51
HOXC11-202ENST00000546378 CT45A5P0DMU8 189 aa11.87□□□□□ -0.51
HOXC11-202ENST00000546378 CT45A7P0DMV0 189 aa11.87□□□□□ -0.51
HOXC11-202ENST00000546378 NMUP48645 174 aa11.87□□□□□ -0.51
HOXC11-202ENST00000546378 MTURNQ8N3F0 131 aa11.87□□□□□ -0.51
HOXC11-202ENST00000546378 PRSS3P2Q8NHM4 247 aa11.87□□□□□ -0.51
HOXC11-202ENST00000546378 SRSF12Q8WXF0 261 aaKnown RBP11.87□□□□□ -0.51
HOXC11-202ENST00000546378 RPUSD1Q9UJJ7 312 aaKnown RBP11.87□□□□□ -0.51
HOXC11-202ENST00000546378 PTPN13Q12923 2485 aa11.87□□□□□ -0.51
HOXC11-202ENST00000546378 SS18L1O75177 396 aaPredicted RBP11.87□□□□□ -0.51
HOXC11-202ENST00000546378 CNIH1O95406 144 aa11.87□□□□□ -0.51
HOXC11-202ENST00000546378 AREGP15514 252 aa11.87□□□□□ -0.51
HOXC11-202ENST00000546378 PPIFP30405 207 aaKnown RBP11.87□□□□□ -0.51
HOXC11-202ENST00000546378 NRN1LQ496H8 165 aa11.87□□□□□ -0.51
HOXC11-202ENST00000546378 JPT1Q9UK76 154 aa11.87□□□□□ -0.51
HOXC11-202ENST00000546378 SMKR1H3BMG3 65 aa11.86□□□□□ -0.51
HOXC11-202ENST00000546378 LY6HO94772 140 aa11.86□□□□□ -0.51
HOXC11-202ENST00000546378 PAX1P15863 534 aa11.86□□□□□ -0.51
HOXC11-202ENST00000546378 TMEM70Q9BUB7 260 aa11.86□□□□□ -0.51
HOXC11-202ENST00000546378 VWC2LB2RUY7 222 aa11.86□□□□□ -0.51
HOXC11-202ENST00000546378 M0R3E3 92 aa11.86□□□□□ -0.51
HOXC11-202ENST00000546378 HES1Q14469 280 aa11.86□□□□□ -0.51
HOXC11-202ENST00000546378 Q8N976 141 aa11.86□□□□□ -0.51
HOXC11-202ENST00000546378 C17orf77Q96MU5 243 aa11.86□□□□□ -0.51
HOXC11-202ENST00000546378 SONP18583 2426 aaKnown RBP11.86□□□□□ -0.51
HOXC11-202ENST00000546378 TLN2Q9Y4G6 2542 aa11.86□□□□□ -0.51
HOXC11-202ENST00000546378 KBTBD11-OT1A0A1B0GTJ5 212 aa11.85□□□□□ -0.51
HOXC11-202ENST00000546378 IZUMO1RA6ND01 250 aa11.85□□□□□ -0.51
HOXC11-202ENST00000546378 TNFSF4P23510 183 aa11.85□□□□□ -0.51
HOXC11-202ENST00000546378 SELENOTP62341 195 aa11.85□□□□□ -0.51
HOXC11-202ENST00000546378 C17orf58Q2M2W7 97 aa11.85□□□□□ -0.51
HOXC11-202ENST00000546378 DNLZQ5SXM8 178 aa11.85□□□□□ -0.51
HOXC11-202ENST00000546378 FCER1GP30273 86 aa11.85□□□□□ -0.51
HOXC11-202ENST00000546378 WT1-ASQ06250 92 aa11.85□□□□□ -0.51
HOXC11-202ENST00000546378 PRR30Q53SZ7 412 aaPredicted RBP11.85□□□□□ -0.51
HOXC11-202ENST00000546378 SFTA2Q6UW10 78 aa11.85□□□□□ -0.51
HOXC11-202ENST00000546378 TMUB1Q9BVT8 246 aa11.85□□□□□ -0.51
HOXC11-202ENST00000546378 IGHV3-49A0A0A0MS15 119 aa11.85□□□□□ -0.51
HOXC11-202ENST00000546378 A0A1W2PRE2 83 aa11.85□□□□□ -0.51
HOXC11-202ENST00000546378 RAB1CQ92928 201 aa11.85□□□□□ -0.51
HOXC11-202ENST00000546378 SLC25A2Q9BXI2 301 aa11.85□□□□□ -0.51
HOXC11-202ENST00000546378 TTTY13Q9BZ97 58 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms