RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 IFI27P40305 119 aaPredicted RBP10.27□□□□□ -0.77
COL4A6-209ENST00000545689 OR5A1Q8NGJ0 315 aa10.27□□□□□ -0.77
COL4A6-209ENST00000545689 SEPSECSQ9HD40 501 aaKnown RBP10.27□□□□□ -0.77
COL4A6-209ENST00000545689 LMO1P25800 156 aa10.27□□□□□ -0.77
COL4A6-209ENST00000545689 METRNQ9UJH8 293 aa10.27□□□□□ -0.77
COL4A6-209ENST00000545689 PSG1P11464 419 aa10.26□□□□□ -0.77
COL4A6-209ENST00000545689 LINC01587Q99440 93 aa10.26□□□□□ -0.77
COL4A6-209ENST00000545689 NDUFA3O95167 84 aa10.26□□□□□ -0.77
COL4A6-209ENST00000545689 IGKCP01834 107 aa10.26□□□□□ -0.77
COL4A6-209ENST00000545689 TRBV7-1A0A0A6YYK4 115 aa10.26□□□□□ -0.77
COL4A6-209ENST00000545689 MUC21A0A0G2JKD1 596 aa10.26□□□□□ -0.77
COL4A6-209ENST00000545689 MUC21A0A140T8X8 626 aa10.26□□□□□ -0.77
COL4A6-209ENST00000545689 SCGB1A1P11684 91 aa10.26□□□□□ -0.77
COL4A6-209ENST00000545689 NTF4P34130 210 aa10.26□□□□□ -0.77
COL4A6-209ENST00000545689 MUC21Q5SSG8 566 aa10.26□□□□□ -0.77
COL4A6-209ENST00000545689 C1orf194Q5T5A4 169 aa10.26□□□□□ -0.77
COL4A6-209ENST00000545689 OR9G4Q8NGQ1 327 aa10.26□□□□□ -0.77
COL4A6-209ENST00000545689 YAE1D1Q9NRH1 226 aa10.26□□□□□ -0.77
COL4A6-209ENST00000545689 MYLKQ15746 1914 aa10.26□□□□□ -0.77
COL4A6-209ENST00000545689 LILRA1O75019 489 aa10.26□□□□□ -0.77
COL4A6-209ENST00000545689 Q6ZS92 163 aa10.26□□□□□ -0.77
COL4A6-209ENST00000545689 CD7P09564 240 aa10.26□□□□□ -0.77
COL4A6-209ENST00000545689 HSD52Q0P140 79 aa10.26□□□□□ -0.77
COL4A6-209ENST00000545689 VMO1Q7Z5L0 202 aa10.26□□□□□ -0.77
COL4A6-209ENST00000545689 ITLN2Q8WWU7 325 aaPredicted RBP10.26□□□□□ -0.77
COL4A6-209ENST00000545689 TRAV3A0A0B4J244 114 aa10.25□□□□□ -0.77
COL4A6-209ENST00000545689 C20orf204Q6ZNR8 217 aa10.25□□□□□ -0.77
COL4A6-209ENST00000545689 GFRA4Q9GZZ7 299 aa10.25□□□□□ -0.77
COL4A6-209ENST00000545689 BUB1B-PAK6H3BSN5 160 aa10.25□□□□□ -0.77
COL4A6-209ENST00000545689 TOMM40O96008 361 aa10.25□□□□□ -0.77
COL4A6-209ENST00000545689 CMC4P56277 68 aaPredicted RBP10.25□□□□□ -0.77
COL4A6-209ENST00000545689 IFI27L1Q96BM0 104 aa10.25□□□□□ -0.77
COL4A6-209ENST00000545689 HAX1O00165 279 aa10.25□□□□□ -0.77
COL4A6-209ENST00000545689 LDLRAD2Q5SZI1 272 aa10.25□□□□□ -0.77
COL4A6-209ENST00000545689 DMRTA1Q5VZB9 504 aa10.25□□□□□ -0.77
COL4A6-209ENST00000545689 ORAOV1Q8WV07 137 aa10.25□□□□□ -0.77
COL4A6-209ENST00000545689 IGHV3-11P01762 117 aa10.25□□□□□ -0.77
COL4A6-209ENST00000545689 ZCCHC24Q8N2G6 241 aaKnown RBP10.25□□□□□ -0.77
COL4A6-209ENST00000545689 BEND2Q8NDZ0 799 aa10.25□□□□□ -0.77
COL4A6-209ENST00000545689 ERVK11-1P61568 191 aa10.25□□□□□ -0.77
COL4A6-209ENST00000545689 MST1LQ2TV78 715 aa10.25□□□□□ -0.77
COL4A6-209ENST00000545689 C9orf139Q6ZV77 190 aa10.25□□□□□ -0.77
COL4A6-209ENST00000545689 Q8TCH9 128 aa10.25□□□□□ -0.77
COL4A6-209ENST00000545689 CHTOPQ9Y3Y2 248 aaKnown RBP10.25□□□□□ -0.77
COL4A6-209ENST00000545689 RALGAPA1Q6GYQ0 2036 aa10.24□□□□□ -0.77
COL4A6-209ENST00000545689 RNASE2P10153 161 aaKnown RBP10.24□□□□□ -0.77
COL4A6-209ENST00000545689 SELLP14151 372 aa10.24□□□□□ -0.77
COL4A6-209ENST00000545689 FAM90A2PQ658T7 463 aa10.24□□□□□ -0.77
COL4A6-209ENST00000545689 TGFAP01135 160 aa10.24□□□□□ -0.77
COL4A6-209ENST00000545689 A0A1B0GWB2 263 aa10.24□□□□□ -0.77
COL4A6-209ENST00000545689 C5orf64Q2M2E5 130 aa10.24□□□□□ -0.77
COL4A6-209ENST00000545689 TMEM155Q4W5P6 130 aa10.24□□□□□ -0.77
COL4A6-209ENST00000545689 ZNF585BQ52M93 769 aa10.24□□□□□ -0.77
COL4A6-209ENST00000545689 C1orf147Q96MC9 270 aaPredicted RBP10.24□□□□□ -0.77
COL4A6-209ENST00000545689 TANC1Q9C0D5 1861 aa10.24□□□□□ -0.77
COL4A6-209ENST00000545689 A0A0G2JNJ9 132 aa10.24□□□□□ -0.77
COL4A6-209ENST00000545689 A0A0G2JRQ6 117 aa10.24□□□□□ -0.77
COL4A6-209ENST00000545689 ADCYAP1P18509 176 aa10.24□□□□□ -0.77
COL4A6-209ENST00000545689 PSG3Q16557 428 aa10.24□□□□□ -0.77
COL4A6-209ENST00000545689 Q9UFV3 132 aa10.24□□□□□ -0.77
COL4A6-209ENST00000545689 SIGLEC9Q9Y336 463 aa10.24□□□□□ -0.77
COL4A6-209ENST00000545689 LYNX1G3V0Z9 82 aa10.24□□□□□ -0.77
COL4A6-209ENST00000545689 LYNX1P0DP58 116 aa10.24□□□□□ -0.77
COL4A6-209ENST00000545689 LAGE3Q14657 143 aa10.24□□□□□ -0.77
COL4A6-209ENST00000545689 C10orf55Q5SWW7 151 aa10.24□□□□□ -0.77
COL4A6-209ENST00000545689 ARL6IP6Q8N6S5 226 aa10.24□□□□□ -0.77
COL4A6-209ENST00000545689 IGHV3OR16-8A0A075B7F1 116 aa10.23□□□□□ -0.77
COL4A6-209ENST00000545689 PMS2P5A8MQ11 134 aa10.23□□□□□ -0.77
COL4A6-209ENST00000545689 SNAI2O43623 268 aa10.23□□□□□ -0.77
COL4A6-209ENST00000545689 GATA4P43694 442 aa10.23□□□□□ -0.77
COL4A6-209ENST00000545689 SCRT1Q9BWW7 348 aa10.23□□□□□ -0.77
COL4A6-209ENST00000545689 JMJD8Q96S16 334 aa10.23□□□□□ -0.77
COL4A6-209ENST00000545689 FAM223BA6NKX1 122 aa10.23□□□□□ -0.77
COL4A6-209ENST00000545689 FAM223AQ8IWN6 122 aa10.23□□□□□ -0.77
COL4A6-209ENST00000545689 DERL1Q9BUN8 251 aa10.23□□□□□ -0.77
COL4A6-209ENST00000545689 ZNF329Q86UD4 541 aa10.23□□□□□ -0.77
COL4A6-209ENST00000545689 RPRMLQ8N4K4 120 aa10.23□□□□□ -0.77
COL4A6-209ENST00000545689 LINC00469Q8N7U9 141 aa10.23□□□□□ -0.77
COL4A6-209ENST00000545689 BEX4Q9NWD9 120 aaPredicted RBP10.23□□□□□ -0.77
COL4A6-209ENST00000545689 ZNF581Q9P0T4 197 aa10.23□□□□□ -0.77
COL4A6-209ENST00000545689 PSMB11A5LHX3 300 aa10.22□□□□□ -0.77
COL4A6-209ENST00000545689 PDE6HQ13956 83 aa10.22□□□□□ -0.77
COL4A6-209ENST00000545689 TMEM262E9PQX1 116 aa10.22□□□□□ -0.77
COL4A6-209ENST00000545689 CNTFRP26992 372 aa10.22□□□□□ -0.77
COL4A6-209ENST00000545689 PCP4P48539 62 aa10.22□□□□□ -0.77
COL4A6-209ENST00000545689 C15orf32Q32M92 178 aa10.22□□□□□ -0.77
COL4A6-209ENST00000545689 ST6GALNAC3Q8NDV1 305 aa10.22□□□□□ -0.77
COL4A6-209ENST00000545689 FRMPD3Q5JV73 1810 aa10.22□□□□□ -0.77
COL4A6-209ENST00000545689 NDUFS6O75380 124 aaKnown RBP10.22□□□□□ -0.77
COL4A6-209ENST00000545689 CA1P00915 261 aaPredicted RBP10.22□□□□□ -0.77
COL4A6-209ENST00000545689 FBLN7Q53RD9 439 aa10.22□□□□□ -0.77
COL4A6-209ENST00000545689 GFI1BQ5VTD9 330 aa10.22□□□□□ -0.77
COL4A6-209ENST00000545689 ZNF418Q8TF45 676 aaPredicted RBP10.22□□□□□ -0.77
COL4A6-209ENST00000545689 RBMY1BA6NDE4 496 aaKnown RBP10.22□□□□□ -0.77
COL4A6-209ENST00000545689 RBMY1EA6NEQ0 496 aaKnown RBP10.22□□□□□ -0.77
COL4A6-209ENST00000545689 H3BUT2 72 aa10.22□□□□□ -0.77
COL4A6-209ENST00000545689 RBMY1DP0C7P1 496 aaKnown RBP10.22□□□□□ -0.77
COL4A6-209ENST00000545689 RBMY1A1P0DJD3 496 aaKnown RBP10.22□□□□□ -0.77
COL4A6-209ENST00000545689 RBMY1CP0DJD4 496 aa10.22□□□□□ -0.77
COL4A6-209ENST00000545689 Q6ZRM9 215 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms