RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 KLF5Q13887 457 aaPredicted RBP9.95□□□□□ -0.82
PAAF1-215ENST00000544909 Q6ZWC4 215 aa9.95□□□□□ -0.82
PAAF1-215ENST00000544909 OR4B1Q8NGF8 309 aa9.95□□□□□ -0.82
PAAF1-215ENST00000544909 TMEM68Q96MH6 324 aa9.95□□□□□ -0.82
PAAF1-215ENST00000544909 PRSS22Q9GZN4 317 aa9.95□□□□□ -0.82
PAAF1-215ENST00000544909 MRPL36Q9P0J6 103 aaKnown RBP9.95□□□□□ -0.82
PAAF1-215ENST00000544909 POLR3KQ9Y2Y1 108 aaPredicted RBP9.95□□□□□ -0.82
PAAF1-215ENST00000544909 MSRB2Q9Y3D2 182 aa9.95□□□□□ -0.82
PAAF1-215ENST00000544909 A8MWL6 223 aa9.94□□□□□ -0.82
PAAF1-215ENST00000544909 M0QZK8 103 aa9.94□□□□□ -0.82
PAAF1-215ENST00000544909 BMPR1BO00238 502 aa9.94□□□□□ -0.82
PAAF1-215ENST00000544909 NUPR1O60356 82 aa9.94□□□□□ -0.82
PAAF1-215ENST00000544909 NDUFA3O95167 84 aa9.94□□□□□ -0.82
PAAF1-215ENST00000544909 SLC25A5P05141 298 aaKnown RBP9.94□□□□□ -0.82
PAAF1-215ENST00000544909 ARL6IP6Q8N6S5 226 aa9.94□□□□□ -0.82
PAAF1-215ENST00000544909 NUDT10Q8NFP7 164 aa9.94□□□□□ -0.82
PAAF1-215ENST00000544909 NPBQ8NG41 125 aa9.94□□□□□ -0.82
PAAF1-215ENST00000544909 OR1B1Q8NGR6 318 aa9.94□□□□□ -0.82
PAAF1-215ENST00000544909 NEU4Q8WWR8 484 aaPredicted RBP9.94□□□□□ -0.82
PAAF1-215ENST00000544909 NUDT11Q96G61 164 aa9.94□□□□□ -0.82
PAAF1-215ENST00000544909 SERTAD4Q9NUC0 356 aa9.94□□□□□ -0.82
PAAF1-215ENST00000544909 MUC6Q6W4X9 2439 aa9.94□□□□□ -0.82
PAAF1-215ENST00000544909 POLEQ07864 2286 aa9.94□□□□□ -0.82
PAAF1-215ENST00000544909 NBEAQ8NFP9 2946 aa9.94□□□□□ -0.82
PAAF1-215ENST00000544909 TRAV30A0A087WSZ9 112 aa9.93□□□□□ -0.82
PAAF1-215ENST00000544909 I3L2K1 104 aa9.93□□□□□ -0.82
PAAF1-215ENST00000544909 ZNF324O75467 553 aaPredicted RBP9.93□□□□□ -0.82
PAAF1-215ENST00000544909 TCRAP04437 139 aa9.93□□□□□ -0.82
PAAF1-215ENST00000544909 HOXB4P17483 251 aaPredicted RBP9.93□□□□□ -0.82
PAAF1-215ENST00000544909 ORM2P19652 201 aa9.93□□□□□ -0.82
PAAF1-215ENST00000544909 FXYD3Q14802 87 aa9.93□□□□□ -0.82
PAAF1-215ENST00000544909 KIR3DL3Q8N743 410 aa9.93□□□□□ -0.82
PAAF1-215ENST00000544909 RITA1Q96K30 269 aa9.93□□□□□ -0.82
PAAF1-215ENST00000544909 HSPB9Q9BQS6 159 aa9.93□□□□□ -0.82
PAAF1-215ENST00000544909 DPM3Q9P2X0 92 aa9.93□□□□□ -0.82
PAAF1-215ENST00000544909 ASPMQ8IZT6 3477 aa9.93□□□□□ -0.82
PAAF1-215ENST00000544909 A0A1B0GXF2 115 aa9.93□□□□□ -0.82
PAAF1-215ENST00000544909 NPIPB6E9PJ23 425 aa9.93□□□□□ -0.82
PAAF1-215ENST00000544909 ZNF253O75346 499 aa9.93□□□□□ -0.82
PAAF1-215ENST00000544909 MOSP00540 346 aa9.93□□□□□ -0.82
PAAF1-215ENST00000544909 HTR1DP28221 377 aa9.93□□□□□ -0.82
PAAF1-215ENST00000544909 GPR6P46095 362 aaPredicted RBP9.93□□□□□ -0.82
PAAF1-215ENST00000544909 PRR30Q53SZ7 412 aaPredicted RBP9.93□□□□□ -0.82
PAAF1-215ENST00000544909 HCP5Q6MZN7 132 aa9.93□□□□□ -0.82
PAAF1-215ENST00000544909 CCDC144NLQ6NUI1 221 aa9.93□□□□□ -0.82
PAAF1-215ENST00000544909 NUP35Q8NFH5 326 aa9.93□□□□□ -0.82
PAAF1-215ENST00000544909 IGFBPL1Q8WX77 278 aa9.93□□□□□ -0.82
PAAF1-215ENST00000544909 RASL11BQ9BPW5 248 aa9.93□□□□□ -0.82
PAAF1-215ENST00000544909 SCNM1Q9BWG6 230 aa9.93□□□□□ -0.82
PAAF1-215ENST00000544909 RPP21Q9H633 154 aaKnown RBP9.93□□□□□ -0.82
PAAF1-215ENST00000544909 ROS1P08922 2347 aa9.93□□□□□ -0.82
PAAF1-215ENST00000544909 PKDREJQ9NTG1 2253 aa9.92□□□□□ -0.82
PAAF1-215ENST00000544909 A0A1B0GUS0 222 aa9.92□□□□□ -0.82
PAAF1-215ENST00000544909 C19orf71A6NCJ1 209 aa9.92□□□□□ -0.82
PAAF1-215ENST00000544909 PGPA6NDG6 321 aa9.92□□□□□ -0.82
PAAF1-215ENST00000544909 FOXC1Q12948 553 aa9.92□□□□□ -0.82
PAAF1-215ENST00000544909 PDE6HQ13956 83 aa9.92□□□□□ -0.82
PAAF1-215ENST00000544909 MMDQ15546 238 aa9.92□□□□□ -0.82
PAAF1-215ENST00000544909 TBX15Q96SF7 602 aa9.92□□□□□ -0.82
PAAF1-215ENST00000544909 CBLN4Q9NTU7 201 aa9.92□□□□□ -0.82
PAAF1-215ENST00000544909 BOD1L1Q8NFC6 3051 aa9.92□□□□□ -0.82
PAAF1-215ENST00000544909 ANKHD1Q8IWZ3 2542 aaKnown RBP9.92□□□□□ -0.82
PAAF1-215ENST00000544909 ZFHX2Q9C0A1 2572 aaPredicted RBP9.91□□□□□ -0.82
PAAF1-215ENST00000544909 IGHV3-72A0A0B4J1Y9 119 aa9.91□□□□□ -0.82
PAAF1-215ENST00000544909 SERTM2A0A1B0GWG4 89 aa9.91□□□□□ -0.82
PAAF1-215ENST00000544909 ODF3BA8MYP8 253 aa9.91□□□□□ -0.82
PAAF1-215ENST00000544909 NBR2O15453 112 aa9.91□□□□□ -0.82
PAAF1-215ENST00000544909 PRTN3P24158 256 aa9.91□□□□□ -0.82
PAAF1-215ENST00000544909 SRIP30626 198 aa9.91□□□□□ -0.82
PAAF1-215ENST00000544909 KLRB1Q12918 225 aa9.91□□□□□ -0.82
PAAF1-215ENST00000544909 ZNF600Q6ZNG1 722 aa9.91□□□□□ -0.82
PAAF1-215ENST00000544909 NEU1Q99519 415 aa9.91□□□□□ -0.82
PAAF1-215ENST00000544909 SLC25A39Q9BZJ4 359 aaPredicted RBP9.91□□□□□ -0.82
PAAF1-215ENST00000544909 Q9H3A6 140 aa9.91□□□□□ -0.82
PAAF1-215ENST00000544909 MALRD1Q5VYJ5 2156 aa9.91□□□□□ -0.82
PAAF1-215ENST00000544909 MGAQ8IWI9 3026 aa9.91□□□□□ -0.82
PAAF1-215ENST00000544909 FBLL1A6NHQ2 334 aaKnown RBP9.91□□□□□ -0.82
PAAF1-215ENST00000544909 NPIPB5A8MRT5 1133 aa9.91□□□□□ -0.82
PAAF1-215ENST00000544909 HIGD1CA8MV81 97 aa9.91□□□□□ -0.82
PAAF1-215ENST00000544909 M0R143 59 aa9.91□□□□□ -0.82
PAAF1-215ENST00000544909 SCGB2A1O75556 95 aa9.91□□□□□ -0.82
PAAF1-215ENST00000544909 PSG1P11464 419 aa9.91□□□□□ -0.82
PAAF1-215ENST00000544909 COL8A2P25067 703 aa9.91□□□□□ -0.82
PAAF1-215ENST00000544909 S100A7P31151 101 aa9.91□□□□□ -0.82
PAAF1-215ENST00000544909 AMTP48728 403 aa9.91□□□□□ -0.82
PAAF1-215ENST00000544909 HBBP68871 147 aa9.91□□□□□ -0.82
PAAF1-215ENST00000544909 MRPL54Q6P161 138 aaKnown RBP9.91□□□□□ -0.82
PAAF1-215ENST00000544909 BPIFA4PQ86YQ2 179 aa9.91□□□□□ -0.82
PAAF1-215ENST00000544909 C18orf32Q8TCD1 76 aa9.91□□□□□ -0.82
PAAF1-215ENST00000544909 MIEN1Q9BRT3 115 aa9.91□□□□□ -0.82
PAAF1-215ENST00000544909 SHANK2-AS3Q9BTD1 123 aa9.91□□□□□ -0.82
PAAF1-215ENST00000544909 VAMP8Q9BV40 100 aa9.91□□□□□ -0.82
PAAF1-215ENST00000544909 ZFP30Q9Y2G7 519 aa9.91□□□□□ -0.82
PAAF1-215ENST00000544909 TBL2Q9Y4P3 447 aaKnown RBP9.91□□□□□ -0.82
PAAF1-215ENST00000544909 PCNX1Q96RV3 2341 aa9.9□□□□□ -0.82
PAAF1-215ENST00000544909 A0A1B0GW15 77 aa9.9□□□□□ -0.82
PAAF1-215ENST00000544909 A0A1W2PS18 150 aa9.9□□□□□ -0.82
PAAF1-215ENST00000544909 ZNF705FA8MVS1 300 aaPredicted RBP9.9□□□□□ -0.82
PAAF1-215ENST00000544909 K7EQM0 130 aa9.9□□□□□ -0.82
PAAF1-215ENST00000544909 IGKV1-17P01599 117 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms