RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 COL8A2P25067 703 aa10.52□□□□□ -0.72
CHD4-211ENST00000544484 TMEM42Q69YG0 159 aa10.52□□□□□ -0.72
CHD4-211ENST00000544484 NPIPB5A8MRT5 1133 aa10.52□□□□□ -0.73
CHD4-211ENST00000544484 FGF16O43320 207 aa10.52□□□□□ -0.73
CHD4-211ENST00000544484 JKAMPQ9P055 326 aa10.52□□□□□ -0.73
CHD4-211ENST00000544484 PSG1P11464 419 aa10.52□□□□□ -0.73
CHD4-211ENST00000544484 C3orf36Q3SXR2 165 aa10.52□□□□□ -0.73
CHD4-211ENST00000544484 Q6AWC8 147 aa10.52□□□□□ -0.73
CHD4-211ENST00000544484 Q6P435 159 aa10.52□□□□□ -0.73
CHD4-211ENST00000544484 RPRMLQ8N4K4 120 aa10.52□□□□□ -0.73
CHD4-211ENST00000544484 GAFA1Q96PS6 74 aa10.52□□□□□ -0.73
CHD4-211ENST00000544484 HS3ST6Q96QI5 342 aa10.52□□□□□ -0.73
CHD4-211ENST00000544484 ASCL2Q99929 193 aa10.52□□□□□ -0.73
CHD4-211ENST00000544484 CLDN16Q9Y5I7 305 aa10.52□□□□□ -0.73
CHD4-211ENST00000544484 ATP5LO75964 103 aa10.52□□□□□ -0.73
CHD4-211ENST00000544484 C20orf204Q6ZNR8 217 aa10.52□□□□□ -0.73
CHD4-211ENST00000544484 EXOC3-AS1Q8N2X6 119 aa10.52□□□□□ -0.73
CHD4-211ENST00000544484 C8orf46Q8TAG6 207 aa10.52□□□□□ -0.73
CHD4-211ENST00000544484 SHANK1Q9Y566 2161 aa10.51□□□□□ -0.73
CHD4-211ENST00000544484 GZMBP10144 247 aa10.51□□□□□ -0.73
CHD4-211ENST00000544484 PAX1P15863 534 aa10.51□□□□□ -0.73
CHD4-211ENST00000544484 LEPP41159 167 aa10.51□□□□□ -0.73
CHD4-211ENST00000544484 COTL1Q14019 142 aa10.51□□□□□ -0.73
CHD4-211ENST00000544484 TPTE2P1Q5T6R2 138 aa10.51□□□□□ -0.73
CHD4-211ENST00000544484 SCRT1Q9BWW7 348 aa10.51□□□□□ -0.73
CHD4-211ENST00000544484 PARD6GQ9BYG4 376 aaPredicted RBP10.51□□□□□ -0.73
CHD4-211ENST00000544484 FHL1Q13642 323 aa10.51□□□□□ -0.73
CHD4-211ENST00000544484 SRSF7Q16629 238 aaKnown RBP eCLIP10.51□□□□□ -0.732e-7■□□□□ 8.9
CHD4-211ENST00000544484 NMSQ5H8A3 153 aa10.51□□□□□ -0.73
CHD4-211ENST00000544484 SEPSECSQ9HD40 501 aaKnown RBP10.51□□□□□ -0.73
CHD4-211ENST00000544484 MBNL3Q9NUK0 354 aaKnown RBP10.51□□□□□ -0.73
CHD4-211ENST00000544484 SOX21Q9Y651 276 aaPredicted RBP10.51□□□□□ -0.73
CHD4-211ENST00000544484 H3BUX3 64 aa10.51□□□□□ -0.73
CHD4-211ENST00000544484 IGHG3P01860 377 aa10.51□□□□□ -0.73
CHD4-211ENST00000544484 QRFPP83859 136 aa10.51□□□□□ -0.73
CHD4-211ENST00000544484 IGKV2-40A0A087WW87 121 aaPredicted RBP10.51□□□□□ -0.73
CHD4-211ENST00000544484 FAM90A9PA6NNJ1 464 aa10.51□□□□□ -0.73
CHD4-211ENST00000544484 IGKV2D-40P01614 121 aaPredicted RBP10.51□□□□□ -0.73
CHD4-211ENST00000544484 OR10J3Q5JRS4 329 aa10.51□□□□□ -0.73
CHD4-211ENST00000544484 EVI2AP22794 236 aa10.51□□□□□ -0.73
CHD4-211ENST00000544484 YLPM1P49750 1951 aaKnown RBP10.51□□□□□ -0.73
CHD4-211ENST00000544484 PSMG4Q5JS54 123 aa10.5□□□□□ -0.73
CHD4-211ENST00000544484 CYTL1Q9NRR1 136 aa10.5□□□□□ -0.73
CHD4-211ENST00000544484 GBF1Q92538 1859 aa10.5□□□□□ -0.73
CHD4-211ENST00000544484 PTPRDP23468 1912 aa10.5□□□□□ -0.73
CHD4-211ENST00000544484 A0A1B0GV90 55 aa10.5□□□□□ -0.73
CHD4-211ENST00000544484 NRN1Q9NPD7 142 aa10.5□□□□□ -0.73
CHD4-211ENST00000544484 ARFGEF3Q5TH69 2177 aa10.5□□□□□ -0.73
CHD4-211ENST00000544484 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.5□□□□□ -0.73
CHD4-211ENST00000544484 SLC25A48Q6ZT89 311 aaKnown RBP10.5□□□□□ -0.73
CHD4-211ENST00000544484 RPP25LQ8N5L8 163 aaKnown RBP10.5□□□□□ -0.73
CHD4-211ENST00000544484 OR5AN1Q8NGI8 311 aa10.5□□□□□ -0.73
CHD4-211ENST00000544484 MBD3L1Q8WWY6 194 aa10.5□□□□□ -0.73
CHD4-211ENST00000544484 ZNRD1Q9P1U0 126 aa10.5□□□□□ -0.73
CHD4-211ENST00000544484 TTC28Q96AY4 2481 aa10.5□□□□□ -0.73
CHD4-211ENST00000544484 TEX38Q6PEX7 206 aa10.5□□□□□ -0.73
CHD4-211ENST00000544484 OSTCQ9NRP0 149 aa10.5□□□□□ -0.73
CHD4-211ENST00000544484 ZNF257Q9Y2Q1 563 aa10.5□□□□□ -0.73
CHD4-211ENST00000544484 NDPQ00604 133 aa10.49□□□□□ -0.73
CHD4-211ENST00000544484 DEFB104AQ8WTQ1 72 aa10.49□□□□□ -0.73
CHD4-211ENST00000544484 MGST2Q99735 147 aa10.49□□□□□ -0.73
CHD4-211ENST00000544484 ZFHX2Q9C0A1 2572 aaPredicted RBP10.49□□□□□ -0.73
CHD4-211ENST00000544484 TRAV21A0A0B4J279 112 aa10.49□□□□□ -0.73
CHD4-211ENST00000544484 H0YJW9 148 aa10.49□□□□□ -0.73
CHD4-211ENST00000544484 HOXA5P20719 270 aa10.49□□□□□ -0.73
CHD4-211ENST00000544484 SIGLEC15Q6ZMC9 328 aa10.49□□□□□ -0.73
CHD4-211ENST00000544484 C2orf88Q9BSF0 95 aa10.49□□□□□ -0.73
CHD4-211ENST00000544484 DERL1Q9BUN8 251 aa10.49□□□□□ -0.73
CHD4-211ENST00000544484 A0A1B0GW15 77 aa10.49□□□□□ -0.73
CHD4-211ENST00000544484 ZNF329Q86UD4 541 aa10.49□□□□□ -0.73
CHD4-211ENST00000544484 PLXNA3P51805 1871 aa10.49□□□□□ -0.73
CHD4-211ENST00000544484 A0A0G2JRQ6 117 aa10.49□□□□□ -0.73
CHD4-211ENST00000544484 SMIM13P0DJ93 91 aa10.49□□□□□ -0.73
CHD4-211ENST00000544484 SCGB1A1P11684 91 aa10.49□□□□□ -0.73
CHD4-211ENST00000544484 TTC9CQ8N5M4 171 aa10.49□□□□□ -0.73
CHD4-211ENST00000544484 CRIM1Q9NZV1 1036 aa10.49□□□□□ -0.73
CHD4-211ENST00000544484 APOMO95445 188 aa10.49□□□□□ -0.73
CHD4-211ENST00000544484 STAG3L3P0CL85 134 aa10.49□□□□□ -0.73
CHD4-211ENST00000544484 MLANAQ16655 118 aa10.49□□□□□ -0.73
CHD4-211ENST00000544484 BPESC1Q9GZL8 116 aa10.49□□□□□ -0.73
CHD4-211ENST00000544484 TMEM170AQ8WVE7 144 aa10.48□□□□□ -0.73
CHD4-211ENST00000544484 MRPL16Q9NX20 251 aaKnown RBP10.48□□□□□ -0.73
CHD4-211ENST00000544484 TRAV9-1A0A075B6T8 112 aa10.48□□□□□ -0.73
CHD4-211ENST00000544484 LY6G6EA0A0G2JKS1 128 aa10.48□□□□□ -0.73
CHD4-211ENST00000544484 E7EQL1 145 aa10.48□□□□□ -0.73
CHD4-211ENST00000544484 NUDT11Q96G61 164 aa10.48□□□□□ -0.73
CHD4-211ENST00000544484 SLC25A39Q9BZJ4 359 aaPredicted RBP10.48□□□□□ -0.73
CHD4-211ENST00000544484 U3KQA8 63 aa10.48□□□□□ -0.73
CHD4-211ENST00000544484 PRDM13Q9H4Q3 707 aa10.48□□□□□ -0.73
CHD4-211ENST00000544484 HEATR5AQ86XA9 2040 aa10.48□□□□□ -0.73
CHD4-211ENST00000544484 BUB1B-PAK6H3BSN5 160 aa10.48□□□□□ -0.73
CHD4-211ENST00000544484 IGFL4Q6B9Z1 124 aa10.48□□□□□ -0.73
CHD4-211ENST00000544484 ST20Q9HBF5 79 aa10.47□□□□□ -0.73
CHD4-211ENST00000544484 ATRXP46100 2492 aa10.47□□□□□ -0.73
CHD4-211ENST00000544484 A0A1B0GWJ7 208 aa10.47□□□□□ -0.73
CHD4-211ENST00000544484 IGKV1-16P04430 117 aa10.47□□□□□ -0.73
CHD4-211ENST00000544484 NTF4P34130 210 aa10.47□□□□□ -0.73
CHD4-211ENST00000544484 NUDT10Q8NFP7 164 aa10.47□□□□□ -0.73
CHD4-211ENST00000544484 C5orf64Q2M2E5 130 aa10.47□□□□□ -0.73
CHD4-211ENST00000544484 COPS9Q8WXC6 57 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms