RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 CTSGP08311 255 aa23.65■■□□□ 1.38
CCM2-219ENST00000544363 SPATA31B1PQ5VZV4 182 aa23.65■■□□□ 1.38
CCM2-219ENST00000544363 ATP6V0BQ99437 205 aa23.65■■□□□ 1.38
CCM2-219ENST00000544363 RNF2Q99496 336 aa23.65■■□□□ 1.38
CCM2-219ENST00000544363 FUT9Q9Y231 359 aa23.65■■□□□ 1.38
CCM2-219ENST00000544363 TMEM89A2RUT3 159 aa23.64■■□□□ 1.38
CCM2-219ENST00000544363 INAFM1C9JVW0 142 aa23.64■■□□□ 1.38
CCM2-219ENST00000544363 RAB9AP51151 201 aa23.64■■□□□ 1.38
CCM2-219ENST00000544363 PATE2Q6UY27 113 aa23.64■■□□□ 1.38
CCM2-219ENST00000544363 FAM210AQ96ND0 272 aa23.64■■□□□ 1.38
CCM2-219ENST00000544363 ELOA3CA0A087WX78 387 aaPredicted RBP23.63■■□□□ 1.37
CCM2-219ENST00000544363 CLEC3BP05452 202 aa23.63■■□□□ 1.37
CCM2-219ENST00000544363 RNASE1P07998 156 aaKnown RBP23.63■■□□□ 1.37
CCM2-219ENST00000544363 STAG3L2P0CL84 134 aa23.63■■□□□ 1.37
CCM2-219ENST00000544363 STAG3L3P0CL85 134 aa23.63■■□□□ 1.37
CCM2-219ENST00000544363 GPR183P32249 361 aa23.63■■□□□ 1.37
CCM2-219ENST00000544363 HILS1P60008 231 aa23.63■■□□□ 1.37
CCM2-219ENST00000544363 C10orf113Q5VZT2 155 aa23.63■■□□□ 1.37
CCM2-219ENST00000544363 OR51G1Q8NGK1 321 aa23.63■■□□□ 1.37
CCM2-219ENST00000544363 NUPL2O15504 423 aaKnown RBP23.62■■□□□ 1.37
CCM2-219ENST00000544363 ORM2P19652 201 aa23.62■■□□□ 1.37
CCM2-219ENST00000544363 PSMB8P28062 276 aa23.62■■□□□ 1.37
CCM2-219ENST00000544363 SLC35B1P78383 322 aa23.62■■□□□ 1.37
CCM2-219ENST00000544363 UQCC3Q6UW78 93 aa23.62■■□□□ 1.37
CCM2-219ENST00000544363 CLEC19AQ6UXS0 136 aa23.62■■□□□ 1.37
CCM2-219ENST00000544363 MIR17HGQ75NE6 70 aa23.62■■□□□ 1.37
CCM2-219ENST00000544363 OR1B1Q8NGR6 318 aa23.62■■□□□ 1.37
CCM2-219ENST00000544363 CHRDL1Q9BU40 450 aa23.62■■□□□ 1.37
CCM2-219ENST00000544363 MRPL32Q9BYC8 188 aaKnown RBP23.62■■□□□ 1.37
CCM2-219ENST00000544363 HYPMO75409 117 aa23.62■■□□□ 1.37
CCM2-219ENST00000544363 ADMP35318 185 aa23.62■■□□□ 1.37
CCM2-219ENST00000544363 SERTAD4Q9NUC0 356 aa23.62■■□□□ 1.37
CCM2-219ENST00000544363 RPL15P61313 204 aaKnown RBP23.61■■□□□ 1.37
CCM2-219ENST00000544363 LYZP61626 148 aa23.61■■□□□ 1.37
CCM2-219ENST00000544363 Q6ZSV7 163 aa23.61■■□□□ 1.37
CCM2-219ENST00000544363 Q8WTZ3 238 aa23.61■■□□□ 1.37
CCM2-219ENST00000544363 A0A0G2JLM5 398 aa23.6■■□□□ 1.37
CCM2-219ENST00000544363 SRSF3P84103 164 aaKnown RBP23.6■■□□□ 1.37
CCM2-219ENST00000544363 GUK1Q16774 197 aa23.6■■□□□ 1.37
CCM2-219ENST00000544363 C10orf99Q6UWK7 81 aa23.6■■□□□ 1.37
CCM2-219ENST00000544363 PBDC1Q9BVG4 233 aa23.6■■□□□ 1.37
CCM2-219ENST00000544363 SCRT1Q9BWW7 348 aa23.6■■□□□ 1.37
CCM2-219ENST00000544363 TEX38Q6PEX7 206 aa23.59■■□□□ 1.37
CCM2-219ENST00000544363 LCNL1Q6ZST4 164 aa23.59■■□□□ 1.37
CCM2-219ENST00000544363 ZNF491Q8N8L2 437 aa23.59■■□□□ 1.37
CCM2-219ENST00000544363 TECRQ9NZ01 308 aaKnown RBP23.59■■□□□ 1.37
CCM2-219ENST00000544363 HIVEP1P15822 2718 aa23.59■■□□□ 1.37
CCM2-219ENST00000544363 WI2-2373I1.2A0A1W2PRP0 233 aa23.59■■□□□ 1.37
CCM2-219ENST00000544363 TGOLN2O43493 480 aa23.59■■□□□ 1.37
CCM2-219ENST00000544363 CXorf1O96002 111 aa23.59■■□□□ 1.37
CCM2-219ENST00000544363 PMS2P11Q13670 270 aa23.59■■□□□ 1.37
CCM2-219ENST00000544363 TMPRSS5Q9H3S3 457 aa23.59■■□□□ 1.37
CCM2-219ENST00000544363 MTORP42345 2549 aa23.59■■□□□ 1.37
CCM2-219ENST00000544363 OR2C1O95371 312 aa23.58■■□□□ 1.36
CCM2-219ENST00000544363 ARL14EPLP0DKL9 152 aa23.58■■□□□ 1.36
CCM2-219ENST00000544363 TOR2AQ5JU69 321 aa23.58■■□□□ 1.36
CCM2-219ENST00000544363 LINC00305Q7Z4B0 112 aa23.58■■□□□ 1.36
CCM2-219ENST00000544363 UHRF2Q96PU4 802 aa23.58■■□□□ 1.36
CCM2-219ENST00000544363 JMJD8Q96S16 334 aa23.58■■□□□ 1.36
CCM2-219ENST00000544363 EIF5A2Q9GZV4 153 aaKnown RBP23.58■■□□□ 1.36
CCM2-219ENST00000544363 GNG13Q9P2W3 67 aa23.58■■□□□ 1.36
CCM2-219ENST00000544363 RBFOX3A6NFN3 312 aa23.57■■□□□ 1.36
CCM2-219ENST00000544363 CRYBA1P05813 215 aa23.57■■□□□ 1.36
CCM2-219ENST00000544363 C8orf88P0DMB2 117 aa23.57■■□□□ 1.36
CCM2-219ENST00000544363 S100A1P23297 94 aa23.57■■□□□ 1.36
CCM2-219ENST00000544363 TAS2R45P59539 299 aa23.57■■□□□ 1.36
CCM2-219ENST00000544363 FOXE3Q13461 319 aa23.57■■□□□ 1.36
CCM2-219ENST00000544363 RNF125Q96EQ8 232 aa23.57■■□□□ 1.36
CCM2-219ENST00000544363 TMEM231Q9H6L2 316 aa23.57■■□□□ 1.36
CCM2-219ENST00000544363 HIGD1AQ9Y241 93 aa23.57■■□□□ 1.36
CCM2-219ENST00000544363 I3L521 148 aa23.56■■□□□ 1.36
CCM2-219ENST00000544363 IL4P05112 153 aa23.56■■□□□ 1.36
CCM2-219ENST00000544363 CD5P06127 495 aa23.56■■□□□ 1.36
CCM2-219ENST00000544363 ELANEP08246 267 aa23.56■■□□□ 1.36
CCM2-219ENST00000544363 MORN5Q5VZ52 161 aa23.56■■□□□ 1.36
CCM2-219ENST00000544363 ZNF600Q6ZNG1 722 aa23.56■■□□□ 1.36
CCM2-219ENST00000544363 IQCF2Q8IXL9 164 aa23.56■■□□□ 1.36
CCM2-219ENST00000544363 MRPL27Q9P0M9 148 aaKnown RBP23.56■■□□□ 1.36
CCM2-219ENST00000544363 PSMB3P49720 205 aa23.55■■□□□ 1.36
CCM2-219ENST00000544363 HAGHQ16775 308 aa23.55■■□□□ 1.36
CCM2-219ENST00000544363 GNB4Q9HAV0 340 aa23.55■■□□□ 1.36
CCM2-219ENST00000544363 TREM1Q9NP99 234 aa23.55■■□□□ 1.36
CCM2-219ENST00000544363 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP23.55■■□□□ 1.36
CCM2-219ENST00000544363 IGHV3-11P01762 117 aa23.55■■□□□ 1.36
CCM2-219ENST00000544363 PEA15Q15121 130 aa23.55■■□□□ 1.36
CCM2-219ENST00000544363 KHDC3LQ587J8 217 aa23.55■■□□□ 1.36
CCM2-219ENST00000544363 ZNF343Q6P1L6 599 aa23.55■■□□□ 1.36
CCM2-219ENST00000544363 RARRES2Q99969 163 aa23.55■■□□□ 1.36
CCM2-219ENST00000544363 PUS1Q9Y606 427 aaKnown RBP eCLIP23.55■■□□□ 1.36
CCM2-219ENST00000544363 IFNA1P01562 189 aa23.54■■□□□ 1.36
CCM2-219ENST00000544363 KIAA0141Q14154 515 aaPredicted RBP23.54■■□□□ 1.36
CCM2-219ENST00000544363 ZNF414Q96IQ9 312 aa23.54■■□□□ 1.36
CCM2-219ENST00000544363 FAM167A-AS1Q96KT0 104 aa23.54■■□□□ 1.36
CCM2-219ENST00000544363 SLC25A2Q9BXI2 301 aa23.54■■□□□ 1.36
CCM2-219ENST00000544363 TRAV5A0A0B4J249 113 aa23.53■■□□□ 1.36
CCM2-219ENST00000544363 GCHFRP30047 84 aa23.53■■□□□ 1.36
CCM2-219ENST00000544363 PQLC2Q6ZP29 291 aa23.53■■□□□ 1.36
CCM2-219ENST00000544363 OR4X2Q8NGF9 303 aa23.53■■□□□ 1.36
CCM2-219ENST00000544363 PPP5D1E7EU14 171 aa23.52■■□□□ 1.36
CCM2-219ENST00000544363 BCL2P10415 239 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms