RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 VWC2LB2RUY7 222 aa12.77□□□□□ -0.37
CHD4-210ENST00000544040 STRCQ7RTU9 1775 aa12.76□□□□□ -0.37
CHD4-210ENST00000544040 FAM90A2PQ658T7 463 aa12.76□□□□□ -0.37
CHD4-210ENST00000544040 Q8TAT8 98 aa12.76□□□□□ -0.37
CHD4-210ENST00000544040 TRIP12Q14669 1992 aaPredicted RBP12.76□□□□□ -0.37
CHD4-210ENST00000544040 TRAV40A0A0B4J280 105 aa12.76□□□□□ -0.37
CHD4-210ENST00000544040 LINC00271P0C7V0 271 aa12.76□□□□□ -0.37
CHD4-210ENST00000544040 KIR3DS1Q14943 382 aa12.76□□□□□ -0.37
CHD4-210ENST00000544040 ACTL10Q5JWF8 245 aa12.76□□□□□ -0.37
CHD4-210ENST00000544040 UBE2DNLQ8IWF7 75 aa12.76□□□□□ -0.37
CHD4-210ENST00000544040 PAQR4Q8N4S7 273 aaPredicted RBP12.76□□□□□ -0.37
CHD4-210ENST00000544040 GFI1Q99684 422 aa12.75□□□□□ -0.37
CHD4-210ENST00000544040 OVOL1O14753 267 aa12.75□□□□□ -0.37
CHD4-210ENST00000544040 ID3Q02535 119 aa12.75□□□□□ -0.37
CHD4-210ENST00000544040 FGFBP3Q8TAT2 258 aa12.75□□□□□ -0.37
CHD4-210ENST00000544040 RPUSD1Q9UJJ7 312 aaKnown RBP12.75□□□□□ -0.37
CHD4-210ENST00000544040 RGPD4Q7Z3J3 1758 aa12.75□□□□□ -0.37
CHD4-210ENST00000544040 TEX43Q6ZNM6 134 aa12.75□□□□□ -0.37
CHD4-210ENST00000544040 PRADC1Q9BSG0 188 aa12.75□□□□□ -0.37
CHD4-210ENST00000544040 HEATR5BQ9P2D3 2071 aa12.75□□□□□ -0.37
CHD4-210ENST00000544040 A0A087WX48 190 aa12.75□□□□□ -0.37
CHD4-210ENST00000544040 SH2D1AO60880 128 aa12.75□□□□□ -0.37
CHD4-210ENST00000544040 RPL35AP18077 110 aaKnown RBP12.75□□□□□ -0.37
CHD4-210ENST00000544040 C1orf194Q5T5A4 169 aa12.75□□□□□ -0.37
CHD4-210ENST00000544040 MGST2Q99735 147 aa12.75□□□□□ -0.37
CHD4-210ENST00000544040 PTPRZ1P23471 2315 aaPredicted RBP12.75□□□□□ -0.37
CHD4-210ENST00000544040 TDRD6O60522 2096 aaKnown RBP12.75□□□□□ -0.37
CHD4-210ENST00000544040 TRGV1A0A0A0MS02 117 aa12.75□□□□□ -0.37
CHD4-210ENST00000544040 DLX4Q92988 240 aaPredicted RBP12.75□□□□□ -0.37
CHD4-210ENST00000544040 SMPXQ9UHP9 88 aa12.75□□□□□ -0.37
CHD4-210ENST00000544040 TDRD15B5MCY1 1934 aaKnown RBP12.74□□□□□ -0.37
CHD4-210ENST00000544040 CD5P06127 495 aa12.74□□□□□ -0.37
CHD4-210ENST00000544040 GGTLC1Q9BX51 225 aa12.74□□□□□ -0.37
CHD4-210ENST00000544040 SLC25A39Q9BZJ4 359 aaPredicted RBP12.74□□□□□ -0.37
CHD4-210ENST00000544040 SPINK8P0C7L1 97 aa12.74□□□□□ -0.37
CHD4-210ENST00000544040 KLRD1Q13241 179 aa12.74□□□□□ -0.37
CHD4-210ENST00000544040 CSRP3P50461 194 aa12.74□□□□□ -0.37
CHD4-210ENST00000544040 DTX2Q86UW9 622 aa12.74□□□□□ -0.37
CHD4-210ENST00000544040 NUP35Q8NFH5 326 aa12.74□□□□□ -0.37
CHD4-210ENST00000544040 WDR83OSQ9Y284 106 aa12.74□□□□□ -0.37
CHD4-210ENST00000544040 CSTL1Q9H114 145 aa12.74□□□□□ -0.37
CHD4-210ENST00000544040 MBNL3Q9NUK0 354 aaKnown RBP12.74□□□□□ -0.37
CHD4-210ENST00000544040 IGHV1-18A0A0C4DH31 117 aa12.74□□□□□ -0.37
CHD4-210ENST00000544040 SAP30O75446 220 aa12.74□□□□□ -0.37
CHD4-210ENST00000544040 LAMB2P55268 1798 aa12.73□□□□□ -0.37
CHD4-210ENST00000544040 PSG3Q16557 428 aa12.73□□□□□ -0.37
CHD4-210ENST00000544040 NRN1LQ496H8 165 aa12.73□□□□□ -0.37
CHD4-210ENST00000544040 C5orf24Q7Z6I8 188 aa12.73□□□□□ -0.37
CHD4-210ENST00000544040 DLEC1Q9Y238 1755 aa12.73□□□□□ -0.37
CHD4-210ENST00000544040 TRAV3A0A0B4J244 114 aa12.73□□□□□ -0.37
CHD4-210ENST00000544040 C3orf79P0CE67 100 aa12.73□□□□□ -0.37
CHD4-210ENST00000544040 GLRX5Q86SX6 157 aa12.73□□□□□ -0.37
CHD4-210ENST00000544040 UNC13CQ8NB66 2214 aa12.73□□□□□ -0.37
CHD4-210ENST00000544040 THBDP07204 575 aa12.73□□□□□ -0.37
CHD4-210ENST00000544040 C15orf32Q32M92 178 aa12.73□□□□□ -0.37
CHD4-210ENST00000544040 KLF17Q5JT82 389 aaPredicted RBP12.73□□□□□ -0.37
CHD4-210ENST00000544040 TMEM158Q8WZ71 300 aa12.73□□□□□ -0.37
CHD4-210ENST00000544040 ADAMTSL5Q6ZMM2 481 aa12.73□□□□□ -0.37
CHD4-210ENST00000544040 SELLP14151 372 aa12.72□□□□□ -0.37
CHD4-210ENST00000544040 C14orf178Q8N769 122 aaPredicted RBP12.72□□□□□ -0.37
CHD4-210ENST00000544040 PLEKHB2Q96CS7 222 aa12.72□□□□□ -0.37
CHD4-210ENST00000544040 C1orf159Q96HA4 380 aa12.72□□□□□ -0.37
CHD4-210ENST00000544040 SPXQ9BT56 116 aa12.72□□□□□ -0.37
CHD4-210ENST00000544040 MAP1BP46821 2468 aaKnown RBP12.72□□□□□ -0.37
CHD4-210ENST00000544040 SHANK3Q9BYB0 1731 aa12.72□□□□□ -0.37
CHD4-210ENST00000544040 TRAV13-1A0A0B4J241 112 aa12.72□□□□□ -0.37
CHD4-210ENST00000544040 TRAV41A0A0B4J266 112 aa12.72□□□□□ -0.37
CHD4-210ENST00000544040 SRRM4A7MD48 611 aaKnown RBP12.72□□□□□ -0.37
CHD4-210ENST00000544040 MPZP25189 248 aa12.72□□□□□ -0.37
CHD4-210ENST00000544040 PTPRFP10586 1907 aa12.72□□□□□ -0.37
CHD4-210ENST00000544040 PLXNB2O15031 1838 aa12.72□□□□□ -0.37
CHD4-210ENST00000544040 SLC25A48Q6ZT89 311 aaKnown RBP12.72□□□□□ -0.37
CHD4-210ENST00000544040 LINC01551Q86U37 167 aa12.72□□□□□ -0.37
CHD4-210ENST00000544040 CYTL1Q9NRR1 136 aa12.72□□□□□ -0.37
CHD4-210ENST00000544040 TRBV24-1A0A075B6N3 115 aa12.72□□□□□ -0.37
CHD4-210ENST00000544040 C9JAW5 83 aa12.72□□□□□ -0.37
CHD4-210ENST00000544040 ARFGEF1Q9Y6D6 1849 aa12.71□□□□□ -0.37
CHD4-210ENST00000544040 WNT2P09544 360 aa12.71□□□□□ -0.37
CHD4-210ENST00000544040 AGMATQ9BSE5 352 aa12.71□□□□□ -0.37
CHD4-210ENST00000544040 A0A087WWL8 130 aa12.71□□□□□ -0.37
CHD4-210ENST00000544040 RASL10AQ92737 203 aa12.71□□□□□ -0.37
CHD4-210ENST00000544040 TMEM242Q9NWH2 141 aa12.71□□□□□ -0.37
CHD4-210ENST00000544040 LEPROTO15243 131 aa12.71□□□□□ -0.37
CHD4-210ENST00000544040 F8WEM9 126 aa12.71□□□□□ -0.37
CHD4-210ENST00000544040 C6orf226Q5I0X4 101 aa12.71□□□□□ -0.37
CHD4-210ENST00000544040 VMO1Q7Z5L0 202 aa12.71□□□□□ -0.37
CHD4-210ENST00000544040 FCN3O75636 299 aa12.71□□□□□ -0.38
CHD4-210ENST00000544040 IGKV1-12A0A0C4DH73 117 aa12.71□□□□□ -0.38
CHD4-210ENST00000544040 PINLYPA6NC86 204 aa12.71□□□□□ -0.38
CHD4-210ENST00000544040 IGKV1D-12P01611 117 aa12.71□□□□□ -0.38
CHD4-210ENST00000544040 SPRR3Q9UBC9 169 aa12.71□□□□□ -0.38
CHD4-210ENST00000544040 SYS1-DBNDD2H3BUS1 97 aa12.7□□□□□ -0.38
CHD4-210ENST00000544040 IGHV1-46P01743 117 aa12.7□□□□□ -0.38
CHD4-210ENST00000544040 ERCC8Q13216 396 aa12.7□□□□□ -0.38
CHD4-210ENST00000544040 UBE2E2Q96LR5 201 aa12.7□□□□□ -0.38
CHD4-210ENST00000544040 IGHV2-26A0A0B4J1V2 119 aa12.7□□□□□ -0.38
CHD4-210ENST00000544040 UBE2V1Q13404 147 aa12.7□□□□□ -0.38
CHD4-210ENST00000544040 ADAMTSL3P82987 1691 aa12.7□□□□□ -0.38
CHD4-210ENST00000544040 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.7□□□□□ -0.38
CHD4-210ENST00000544040 GAGE12BA1L429 117 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms