RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 OR8G2PQ6IF36 304 aa16.24■□□□□ 0.19
OTUB1-212ENST00000543988 TMEM14EPQ6UXP3 125 aa16.24■□□□□ 0.19
OTUB1-212ENST00000543988 LINC00322Q6ZN03 302 aaPredicted RBP16.24■□□□□ 0.19
OTUB1-212ENST00000543988 C2orf50Q96LR7 162 aa16.24■□□□□ 0.19
OTUB1-212ENST00000543988 MARVELD1Q9BSK0 173 aa16.24■□□□□ 0.19
OTUB1-212ENST00000543988 UBQLN2Q9UHD9 624 aa16.24■□□□□ 0.19
OTUB1-212ENST00000543988 A0A1W2PS18 150 aa16.23■□□□□ 0.19
OTUB1-212ENST00000543988 C7orf66A4D0T2 115 aa16.23■□□□□ 0.19
OTUB1-212ENST00000543988 PMS2P5A8MQ11 134 aa16.23■□□□□ 0.19
OTUB1-212ENST00000543988 K7EPK0 472 aa16.23■□□□□ 0.19
OTUB1-212ENST00000543988 PRAF2O60831 178 aa16.23■□□□□ 0.19
OTUB1-212ENST00000543988 TSC22D2O75157 780 aa16.23■□□□□ 0.19
OTUB1-212ENST00000543988 HNRNPCP07910 306 aaKnown RBP eCLIP16.23■□□□□ 0.19
OTUB1-212ENST00000543988 METTL15P1P0C7V9 234 aa16.23■□□□□ 0.19
OTUB1-212ENST00000543988 TAS2R30P59541 319 aa16.23■□□□□ 0.19
OTUB1-212ENST00000543988 GSG1LQ6UXU4 331 aa16.23■□□□□ 0.19
OTUB1-212ENST00000543988 GBGT1Q8N5D6 347 aa16.23■□□□□ 0.19
OTUB1-212ENST00000543988 OR51G1Q8NGK1 321 aa16.23■□□□□ 0.19
OTUB1-212ENST00000543988 RNF125Q96EQ8 232 aa16.23■□□□□ 0.19
OTUB1-212ENST00000543988 NARS2Q96I59 477 aaKnown RBP16.23■□□□□ 0.19
OTUB1-212ENST00000543988 TRGV9Q99603 122 aa16.23■□□□□ 0.19
OTUB1-212ENST00000543988 TM2D3Q9BRN9 247 aa16.23■□□□□ 0.19
OTUB1-212ENST00000543988 LSM5Q9Y4Y9 91 aaKnown RBP16.23■□□□□ 0.19
OTUB1-212ENST00000543988 TENM3Q9P273 2699 aa16.22■□□□□ 0.19
OTUB1-212ENST00000543988 SNRPGP15A8MWD9 76 aa16.22■□□□□ 0.19
OTUB1-212ENST00000543988 CD5P06127 495 aa16.22■□□□□ 0.19
OTUB1-212ENST00000543988 AKR1C1Q04828 323 aa16.22■□□□□ 0.19
OTUB1-212ENST00000543988 OR2F1Q13607 317 aa16.22■□□□□ 0.19
OTUB1-212ENST00000543988 CITED4Q96RK1 184 aa16.22■□□□□ 0.19
OTUB1-212ENST00000543988 FABP1P07148 127 aa16.21■□□□□ 0.19
OTUB1-212ENST00000543988 RPL11P62913 178 aaKnown RBP16.21■□□□□ 0.19
OTUB1-212ENST00000543988 GRAMD2BQ96HH9 432 aa16.21■□□□□ 0.19
OTUB1-212ENST00000543988 PBDC1Q9BVG4 233 aa16.21■□□□□ 0.19
OTUB1-212ENST00000543988 MS4A6AQ9H2W1 248 aa16.21■□□□□ 0.19
OTUB1-212ENST00000543988 SMCO3A2RU48 225 aa16.2■□□□□ 0.18
OTUB1-212ENST00000543988 L7N2F9 121 aa16.2■□□□□ 0.18
OTUB1-212ENST00000543988 GOSR2O14653 212 aa16.2■□□□□ 0.18
OTUB1-212ENST00000543988 S100A10P60903 97 aa16.2■□□□□ 0.18
OTUB1-212ENST00000543988 VAMP2P63027 116 aa16.2■□□□□ 0.18
OTUB1-212ENST00000543988 IL15RAQ13261 267 aa16.2■□□□□ 0.18
OTUB1-212ENST00000543988 GLMPQ8WWB7 406 aa16.2■□□□□ 0.18
OTUB1-212ENST00000543988 RCHY1Q96PM5 261 aa16.2■□□□□ 0.18
OTUB1-212ENST00000543988 C11orf1Q9H5F2 150 aa16.2■□□□□ 0.18
OTUB1-212ENST00000543988 RABAC1Q9UI14 185 aa16.2■□□□□ 0.18
OTUB1-212ENST00000543988 LYZP61626 148 aa16.19■□□□□ 0.18
OTUB1-212ENST00000543988 RRAS2P62070 204 aaPredicted RBP16.19■□□□□ 0.18
OTUB1-212ENST00000543988 DLK1P80370 383 aa16.19■□□□□ 0.18
OTUB1-212ENST00000543988 C16orf54Q6UWD8 224 aa16.19■□□□□ 0.18
OTUB1-212ENST00000543988 WFDC3Q8IUB2 231 aa16.19■□□□□ 0.18
OTUB1-212ENST00000543988 FAM110AQ9BQ89 295 aa16.19■□□□□ 0.18
OTUB1-212ENST00000543988 ZMAT4Q9H898 229 aa16.19■□□□□ 0.18
OTUB1-212ENST00000543988 SIX6O95475 246 aa16.18■□□□□ 0.18
OTUB1-212ENST00000543988 EIF2B2P49770 351 aaKnown RBP16.18■□□□□ 0.18
OTUB1-212ENST00000543988 PAFAH1B2P68402 229 aa16.18■□□□□ 0.18
OTUB1-212ENST00000543988 ARL16Q0P5N6 197 aa16.18■□□□□ 0.18
OTUB1-212ENST00000543988 RAB32Q13637 225 aa16.18■□□□□ 0.18
OTUB1-212ENST00000543988 TMEM144Q7Z5S9 345 aa16.18■□□□□ 0.18
OTUB1-212ENST00000543988 STXBP6Q8NFX7 210 aa16.18■□□□□ 0.18
OTUB1-212ENST00000543988 MAP6D1Q9H9H5 199 aa16.18■□□□□ 0.18
OTUB1-212ENST00000543988 TRAV2A0A0B4J234 112 aa16.17■□□□□ 0.18
OTUB1-212ENST00000543988 DNASE2O00115 360 aaPredicted RBP16.17■□□□□ 0.18
OTUB1-212ENST00000543988 FAM24BQ8N5W8 94 aa16.17■□□□□ 0.18
OTUB1-212ENST00000543988 OR10P1Q8NGE3 313 aa16.17■□□□□ 0.18
OTUB1-212ENST00000543988 SPATA25Q9BR10 227 aa16.17■□□□□ 0.18
OTUB1-212ENST00000543988 GGTLC1Q9BX51 225 aa16.17■□□□□ 0.18
OTUB1-212ENST00000543988 RETNQ9HD89 108 aa16.17■□□□□ 0.18
OTUB1-212ENST00000543988 HELTA6NFD8 242 aa16.16■□□□□ 0.18
OTUB1-212ENST00000543988 BUB3O43684 328 aa16.16■□□□□ 0.18
OTUB1-212ENST00000543988 GATA2P23769 480 aaPredicted RBP16.16■□□□□ 0.18
OTUB1-212ENST00000543988 BCAP31P51572 246 aa16.16■□□□□ 0.18
OTUB1-212ENST00000543988 CAV2P51636 162 aa16.16■□□□□ 0.18
OTUB1-212ENST00000543988 ZNF124Q15973 351 aa16.16■□□□□ 0.18
OTUB1-212ENST00000543988 TMEM182Q6ZP80 229 aaPredicted RBP16.16■□□□□ 0.18
OTUB1-212ENST00000543988 APRG1Q8IVJ8 170 aa16.16■□□□□ 0.18
OTUB1-212ENST00000543988 STPG3Q8N7X2 389 aa16.16■□□□□ 0.18
OTUB1-212ENST00000543988 PVALBP20472 110 aaPredicted RBP16.15■□□□□ 0.18
OTUB1-212ENST00000543988 NUP62P37198 522 aaPredicted RBP16.15■□□□□ 0.18
OTUB1-212ENST00000543988 NBEAL2Q6ZNJ1 2754 aa16.15■□□□□ 0.18
OTUB1-212ENST00000543988 MGAT4CQ9UBM8 478 aa16.15■□□□□ 0.18
OTUB1-212ENST00000543988 LOC102724200A0A096LPH7 203 aaPredicted RBP16.14■□□□□ 0.17
OTUB1-212ENST00000543988 FAM24AA6NFZ4 105 aa16.14■□□□□ 0.17
OTUB1-212ENST00000543988 FNDC10F2Z333 226 aa16.14■□□□□ 0.17
OTUB1-212ENST00000543988 K7EQG2 157 aa16.14■□□□□ 0.17
OTUB1-212ENST00000543988 PTTG1O95997 202 aa16.14■□□□□ 0.17
OTUB1-212ENST00000543988 BPIFCQ8NFQ6 507 aa16.14■□□□□ 0.17
OTUB1-212ENST00000543988 DCANP1Q8TF63 244 aa16.14■□□□□ 0.17
OTUB1-212ENST00000543988 WWC2-AS2Q96NR7 200 aa16.14■□□□□ 0.17
OTUB1-212ENST00000543988 SSNA1O43805 119 aa16.13■□□□□ 0.17
OTUB1-212ENST00000543988 DEDDO75618 318 aa16.13■□□□□ 0.17
OTUB1-212ENST00000543988 CST7O76096 145 aa16.13■□□□□ 0.17
OTUB1-212ENST00000543988 CFDP00746 253 aaPredicted RBP16.13■□□□□ 0.17
OTUB1-212ENST00000543988 CMC4P56277 68 aaPredicted RBP16.13■□□□□ 0.17
OTUB1-212ENST00000543988 SLC38A11Q08AI6 406 aa16.13■□□□□ 0.17
OTUB1-212ENST00000543988 SIGLEC15Q6ZMC9 328 aa16.13■□□□□ 0.17
OTUB1-212ENST00000543988 CYP2G1PQ6ZSU1 146 aa16.13■□□□□ 0.17
OTUB1-212ENST00000543988 GGACTQ9BVM4 153 aa16.13■□□□□ 0.17
OTUB1-212ENST00000543988 LYRM2Q9NU23 88 aaPredicted RBP16.13■□□□□ 0.17
OTUB1-212ENST00000543988 PFDN2Q9UHV9 154 aa16.13■□□□□ 0.17
OTUB1-212ENST00000543988 IGSF23A1L1A6 192 aa16.12■□□□□ 0.17
OTUB1-212ENST00000543988 H2BFSP57053 126 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms