RNA–Protein interactions for RNA: ENST00000543615.1

FAM60A-208, Transcript of Protein FAM60A, humanhuman

TSL 5

Gene FAM60A, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-208ENST00000543615 LEMD1Q68G75 181 aa13.22□□□□□ -0.29
FAM60A-208ENST00000543615 CCDC190Q86UF4 302 aa13.22□□□□□ -0.29
FAM60A-208ENST00000543615 ACY3Q96HD9 319 aa13.22□□□□□ -0.29
FAM60A-208ENST00000543615 BUB3O43684 328 aa13.21□□□□□ -0.29
FAM60A-208ENST00000543615 CFDP00746 253 aaPredicted RBP13.21□□□□□ -0.29
FAM60A-208ENST00000543615 TCTAP57738 103 aa13.21□□□□□ -0.29
FAM60A-208ENST00000543615 DHRS2Q13268 280 aa13.21□□□□□ -0.29
FAM60A-208ENST00000543615 USF2Q15853 346 aaPredicted RBP13.21□□□□□ -0.29
FAM60A-208ENST00000543615 TMED4Q7Z7H5 227 aa13.21□□□□□ -0.29
FAM60A-208ENST00000543615 RNF125Q96EQ8 232 aa13.21□□□□□ -0.29
FAM60A-208ENST00000543615 NRN1Q9NPD7 142 aa13.21□□□□□ -0.29
FAM60A-208ENST00000543615 FBXL17Q9UF56 701 aa13.21□□□□□ -0.29
FAM60A-208ENST00000543615 NAP1L6A6NFF2 107 aa13.2□□□□□ -0.3
FAM60A-208ENST00000543615 NXPH3O95157 252 aa13.2□□□□□ -0.3
FAM60A-208ENST00000543615 ZNF688P0C7X2 276 aa13.2□□□□□ -0.3
FAM60A-208ENST00000543615 VAMP1P23763 118 aa13.2□□□□□ -0.3
FAM60A-208ENST00000543615 NUTF2P61970 127 aaKnown RBP13.2□□□□□ -0.3
FAM60A-208ENST00000543615 EWSR1Q01844 656 aaKnown RBP eCLIP13.2□□□□□ -0.31e-6■■□□□ 13.2
FAM60A-208ENST00000543615 SAMD13Q5VXD3 122 aa13.2□□□□□ -0.3
FAM60A-208ENST00000543615 SIGLEC15Q6ZMC9 328 aa13.2□□□□□ -0.3
FAM60A-208ENST00000543615 CENPSQ8N2Z9 138 aa13.2□□□□□ -0.3
FAM60A-208ENST00000543615 FAM24BQ8N5W8 94 aa13.2□□□□□ -0.3
FAM60A-208ENST00000543615 C1QTNF4Q9BXJ3 329 aa13.2□□□□□ -0.3
FAM60A-208ENST00000543615 RBM38Q9H0Z9 239 aaKnown RBP13.2□□□□□ -0.3
FAM60A-208ENST00000543615 HRH4Q9H3N8 390 aa13.2□□□□□ -0.3
FAM60A-208ENST00000543615 PRR13Q9NZ81 148 aa13.2□□□□□ -0.3
FAM60A-208ENST00000543615 ZFP92A6NM28 416 aa13.19□□□□□ -0.3
FAM60A-208ENST00000543615 SFT2D2O95562 160 aa13.19□□□□□ -0.3
FAM60A-208ENST00000543615 PSG1P11464 419 aa13.19□□□□□ -0.3
FAM60A-208ENST00000543615 MIFP14174 115 aa13.19□□□□□ -0.3
FAM60A-208ENST00000543615 S100A7P31151 101 aa13.19□□□□□ -0.3
FAM60A-208ENST00000543615 C1orf194Q5T5A4 169 aa13.19□□□□□ -0.3
FAM60A-208ENST00000543615 C11orf45Q8TAV5 145 aa13.19□□□□□ -0.3
FAM60A-208ENST00000543615 PHLDA1Q8WV24 401 aaPredicted RBP13.19□□□□□ -0.3
FAM60A-208ENST00000543615 ALMS1Q8TCU4 4167 aa13.18□□□□□ -0.3
FAM60A-208ENST00000543615 TRGV9Q99603 122 aa13.18□□□□□ -0.3
FAM60A-208ENST00000543615 ZNF705EA8MWA4 302 aaPredicted RBP13.17□□□□□ -0.3
FAM60A-208ENST00000543615 INPP1P49441 399 aa13.17□□□□□ -0.3
FAM60A-208ENST00000543615 GAMTQ14353 236 aa13.17□□□□□ -0.3
FAM60A-208ENST00000543615 SLC45A2Q9UMX9 530 aa13.17□□□□□ -0.3
FAM60A-208ENST00000543615 SNRPGP15A8MWD9 76 aa13.16□□□□□ -0.3
FAM60A-208ENST00000543615 C11orf94C9JXX5 98 aa13.16□□□□□ -0.3
FAM60A-208ENST00000543615 NKX2-1P43699 371 aaPredicted RBP13.16□□□□□ -0.3
FAM60A-208ENST00000543615 PPP1R1AQ13522 171 aa13.16□□□□□ -0.3
FAM60A-208ENST00000543615 CNPY1Q3B7I2 92 aa13.16□□□□□ -0.3
FAM60A-208ENST00000543615 PSMG4Q5JS54 123 aa13.16□□□□□ -0.3
FAM60A-208ENST00000543615 THAP8Q8NA92 274 aa13.16□□□□□ -0.3
FAM60A-208ENST00000543615 SRRQ9GZT4 340 aa13.16□□□□□ -0.3
FAM60A-208ENST00000543615 PLECQ15149 4684 aaKnown RBP13.15□□□□□ -0.3
FAM60A-208ENST00000543615 SYNGR2O43760 224 aa13.15□□□□□ -0.3
FAM60A-208ENST00000543615 ID1P41134 155 aa13.15□□□□□ -0.3
FAM60A-208ENST00000543615 ACTL10Q5JWF8 245 aa13.15□□□□□ -0.3
FAM60A-208ENST00000543615 SPATA31B1PQ5VZV4 182 aa13.15□□□□□ -0.3
FAM60A-208ENST00000543615 GGNBP1Q5YKI7 109 aa13.15□□□□□ -0.3
FAM60A-208ENST00000543615 TRIQKQ629K1 86 aa13.15□□□□□ -0.3
FAM60A-208ENST00000543615 Q8NAQ8 132 aa13.15□□□□□ -0.3
FAM60A-208ENST00000543615 RAB40CQ96S21 281 aa13.15□□□□□ -0.3
FAM60A-208ENST00000543615 C7orf50Q9BRJ6 194 aaKnown RBP13.15□□□□□ -0.3
FAM60A-208ENST00000543615 IGKV1D-37A0A075B6S9 117 aa13.14□□□□□ -0.31
FAM60A-208ENST00000543615 LY6G6CO95867 125 aa13.14□□□□□ -0.31
FAM60A-208ENST00000543615 MEOX2P50222 304 aa13.14□□□□□ -0.31
FAM60A-208ENST00000543615 LGALS9CQ6DKI2 356 aa13.14□□□□□ -0.31
FAM60A-208ENST00000543615 CLUHP3Q96NS8 147 aa13.14□□□□□ -0.31
FAM60A-208ENST00000543615 CENPXA8MT69 81 aa13.13□□□□□ -0.31
FAM60A-208ENST00000543615 NDUFB6O95139 128 aa13.13□□□□□ -0.31
FAM60A-208ENST00000543615 GIG44P09565 113 aaPredicted RBP13.13□□□□□ -0.31
FAM60A-208ENST00000543615 HLA-DRB4P13762 266 aa13.13□□□□□ -0.31
FAM60A-208ENST00000543615 PSMB3P49720 205 aa13.13□□□□□ -0.31
FAM60A-208ENST00000543615 COQ8AQ8NI60 647 aa13.13□□□□□ -0.31
FAM60A-208ENST00000543615 PBDC1Q9BVG4 233 aa13.13□□□□□ -0.31
FAM60A-208ENST00000543615 HLA-DRB4X5D2U9 266 aa13.13□□□□□ -0.31
FAM60A-208ENST00000543615 KNCNA6PVL3 124 aa13.12□□□□□ -0.31
FAM60A-208ENST00000543615 IAPPP10997 89 aa13.12□□□□□ -0.31
FAM60A-208ENST00000543615 C4BPBP20851 252 aa13.12□□□□□ -0.31
FAM60A-208ENST00000543615 C2CD4CQ8TF44 421 aa13.12□□□□□ -0.31
FAM60A-208ENST00000543615 TBC1D24Q9ULP9 559 aa13.12□□□□□ -0.31
FAM60A-208ENST00000543615 PRSS46E5RG02 174 aa13.11□□□□□ -0.31
FAM60A-208ENST00000543615 H3BMM0 161 aa13.11□□□□□ -0.31
FAM60A-208ENST00000543615 ISLRO14498 428 aa13.11□□□□□ -0.31
FAM60A-208ENST00000543615 IFNA21P01568 189 aa13.11□□□□□ -0.31
FAM60A-208ENST00000543615 HOXB5P09067 269 aa13.11□□□□□ -0.31
FAM60A-208ENST00000543615 LYZP61626 148 aa13.11□□□□□ -0.31
FAM60A-208ENST00000543615 ZNF90Q03938 601 aa13.11□□□□□ -0.31
FAM60A-208ENST00000543615 CSNK1G2-AS1Q8NCQ2 148 aa13.11□□□□□ -0.31
FAM60A-208ENST00000543615 GPR82Q96P67 336 aa13.11□□□□□ -0.31
FAM60A-208ENST00000543615 STRAPQ9Y3F4 350 aaKnown RBP13.11□□□□□ -0.31
FAM60A-208ENST00000543615 IGHV4-28A0A0C4DH34 117 aa13.1□□□□□ -0.31
FAM60A-208ENST00000543615 C9orf170A2RU37 121 aa13.1□□□□□ -0.31
FAM60A-208ENST00000543615 NANOS2P60321 138 aaKnown RBP13.1□□□□□ -0.31
FAM60A-208ENST00000543615 ID3Q02535 119 aa13.1□□□□□ -0.31
FAM60A-208ENST00000543615 FOXI2Q6ZQN5 318 aa13.1□□□□□ -0.31
FAM60A-208ENST00000543615 S100A7AQ86SG5 101 aa13.1□□□□□ -0.31
FAM60A-208ENST00000543615 BPIFCQ8NFQ6 507 aa13.1□□□□□ -0.31
FAM60A-208ENST00000543615 OR4D5Q8NGN0 318 aa13.1□□□□□ -0.31
FAM60A-208ENST00000543615 PPP1R14BQ96C90 147 aa13.1□□□□□ -0.31
FAM60A-208ENST00000543615 PAIP2BQ9ULR5 123 aaKnown RBP13.1□□□□□ -0.31
FAM60A-208ENST00000543615 X6R8D5 127 aa13.1□□□□□ -0.31
FAM60A-208ENST00000543615 WRBO00258 174 aa13.09□□□□□ -0.31
FAM60A-208ENST00000543615 GALR1P47211 349 aa13.09□□□□□ -0.31
FAM60A-208ENST00000543615 OR8I2Q8N0Y5 310 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms