RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 OR4C46A6NHA9 309 aa10.39□□□□□ -0.75
DDX11-223ENST00000542838 A8MWL6 223 aa10.39□□□□□ -0.75
DDX11-223ENST00000542838 NBEAP1P0C6P0 100 aa10.39□□□□□ -0.75
DDX11-223ENST00000542838 MEF2CQ06413 473 aaPredicted RBP10.39□□□□□ -0.75
DDX11-223ENST00000542838 UBE2V1Q13404 147 aa10.39□□□□□ -0.75
DDX11-223ENST00000542838 DEFB109BQ30KR1 87 aa10.39□□□□□ -0.75
DDX11-223ENST00000542838 KLF12Q9Y4X4 402 aa10.39□□□□□ -0.75
DDX11-223ENST00000542838 PLXNB1O43157 2135 aa10.39□□□□□ -0.75
DDX11-223ENST00000542838 IGHV1-69-2A0A0G2JMI3 117 aa10.39□□□□□ -0.75
DDX11-223ENST00000542838 C22orf46C9J442 243 aa10.39□□□□□ -0.75
DDX11-223ENST00000542838 TOMM40O96008 361 aa10.39□□□□□ -0.75
DDX11-223ENST00000542838 P01737 135 aa10.39□□□□□ -0.75
DDX11-223ENST00000542838 ZCCHC24Q8N2G6 241 aaKnown RBP10.39□□□□□ -0.75
DDX11-223ENST00000542838 H1FXQ92522 213 aaKnown RBP10.39□□□□□ -0.75
DDX11-223ENST00000542838 SMIM12Q96EX1 92 aa10.39□□□□□ -0.75
DDX11-223ENST00000542838 MLST8Q9BVC4 326 aa10.39□□□□□ -0.75
DDX11-223ENST00000542838 A0A1W2PPI3 338 aa10.39□□□□□ -0.75
DDX11-223ENST00000542838 SLC25A17O43808 307 aa10.39□□□□□ -0.75
DDX11-223ENST00000542838 IGLV2-23P01705 113 aa10.39□□□□□ -0.75
DDX11-223ENST00000542838 RUSC1-AS1Q66K80 236 aa10.39□□□□□ -0.75
DDX11-223ENST00000542838 TMEM200BQ69YZ2 307 aa10.39□□□□□ -0.75
DDX11-223ENST00000542838 HCP5Q6MZN7 132 aa10.39□□□□□ -0.75
DDX11-223ENST00000542838 C22orf34Q6ZV56 151 aa10.39□□□□□ -0.75
DDX11-223ENST00000542838 TPSG1Q9NRR2 321 aa10.39□□□□□ -0.75
DDX11-223ENST00000542838 H3BTX0 84 aa10.38□□□□□ -0.75
DDX11-223ENST00000542838 FAM120AOSQ5T036 256 aa10.38□□□□□ -0.75
DDX11-223ENST00000542838 GTSF1Q8WW33 167 aa10.38□□□□□ -0.75
DDX11-223ENST00000542838 DAZAP1Q96EP5 407 aaKnown RBP10.38□□□□□ -0.75
DDX11-223ENST00000542838 WASHC3Q9Y3C0 194 aa10.38□□□□□ -0.75
DDX11-223ENST00000542838 FAM215AQ9Y5M1 114 aa10.38□□□□□ -0.75
DDX11-223ENST00000542838 CD40P25942 277 aa10.38□□□□□ -0.75
DDX11-223ENST00000542838 ZNF137PP52743 207 aa10.38□□□□□ -0.75
DDX11-223ENST00000542838 FAM27E3Q08E93 113 aa10.38□□□□□ -0.75
DDX11-223ENST00000542838 VMA21Q3ZAQ7 101 aa10.38□□□□□ -0.75
DDX11-223ENST00000542838 LINC00173Q6ZV60 143 aa10.38□□□□□ -0.75
DDX11-223ENST00000542838 RNASE8Q8TDE3 154 aaKnown RBP10.38□□□□□ -0.75
DDX11-223ENST00000542838 PRSS22Q9GZN4 317 aa10.38□□□□□ -0.75
DDX11-223ENST00000542838 TP73-AS1Q9UF72 201 aa10.38□□□□□ -0.75
DDX11-223ENST00000542838 IGHV1-24A0A0C4DH33 117 aa10.37□□□□□ -0.75
DDX11-223ENST00000542838 LEPROTL1O95214 131 aa10.37□□□□□ -0.75
DDX11-223ENST00000542838 ETFRF1Q6IPR1 90 aa10.37□□□□□ -0.75
DDX11-223ENST00000542838 C5orf17Q8NAS9 161 aa10.37□□□□□ -0.75
DDX11-223ENST00000542838 TMEM186Q96B77 213 aa10.37□□□□□ -0.75
DDX11-223ENST00000542838 FMC1Q96HJ9 113 aa10.37□□□□□ -0.75
DDX11-223ENST00000542838 IGHV3-21A0A0B4J1V1 117 aa10.37□□□□□ -0.75
DDX11-223ENST00000542838 SYS1-DBNDD2H3BUS1 97 aa10.37□□□□□ -0.75
DDX11-223ENST00000542838 TNFRSF1AP19438 455 aa10.37□□□□□ -0.75
DDX11-223ENST00000542838 CHCHD1Q96BP2 118 aaKnown RBP10.37□□□□□ -0.75
DDX11-223ENST00000542838 ZNF835Q9Y2P0 537 aa10.37□□□□□ -0.75
DDX11-223ENST00000542838 SOX21Q9Y651 276 aaPredicted RBP10.37□□□□□ -0.75
DDX11-223ENST00000542838 C19orf71A6NCJ1 209 aa10.37□□□□□ -0.75
DDX11-223ENST00000542838 FCN3O75636 299 aa10.37□□□□□ -0.75
DDX11-223ENST00000542838 FAM87AP0C7U9 286 aa10.37□□□□□ -0.75
DDX11-223ENST00000542838 CT83Q5H943 113 aa10.37□□□□□ -0.75
DDX11-223ENST00000542838 RITA1Q96K30 269 aa10.37□□□□□ -0.75
DDX11-223ENST00000542838 Q9H3A6 140 aa10.37□□□□□ -0.75
DDX11-223ENST00000542838 ZNF492Q9P255 531 aa10.37□□□□□ -0.75
DDX11-223ENST00000542838 hDV102S1A0JD36 115 aa10.36□□□□□ -0.75
DDX11-223ENST00000542838 CRXO43186 299 aaPredicted RBP10.36□□□□□ -0.75
DDX11-223ENST00000542838 ENSAO43768 121 aaKnown RBP10.36□□□□□ -0.75
DDX11-223ENST00000542838 LTAP01374 205 aa10.36□□□□□ -0.75
DDX11-223ENST00000542838 ZADH2Q8N4Q0 377 aa10.36□□□□□ -0.75
DDX11-223ENST00000542838 TRGV9Q99603 122 aa10.36□□□□□ -0.75
DDX11-223ENST00000542838 ST20Q9HBF5 79 aa10.36□□□□□ -0.75
DDX11-223ENST00000542838 CHEK1O14757 476 aa10.36□□□□□ -0.75
DDX11-223ENST00000542838 TCRAP04437 139 aa10.36□□□□□ -0.75
DDX11-223ENST00000542838 APELAP0DMC3 54 aa10.36□□□□□ -0.75
DDX11-223ENST00000542838 FBLN7Q53RD9 439 aa10.36□□□□□ -0.75
DDX11-223ENST00000542838 C1orf185Q5T7R7 199 aa10.36□□□□□ -0.75
DDX11-223ENST00000542838 RBPMS2Q6ZRY4 209 aaKnown RBP10.36□□□□□ -0.75
DDX11-223ENST00000542838 C22orf15Q8WYQ4 148 aa10.36□□□□□ -0.75
DDX11-223ENST00000542838 ZFHX4Q86UP3 3567 aa10.35□□□□□ -0.75
DDX11-223ENST00000542838 MPV17L2Q567V2 206 aa10.35□□□□□ -0.75
DDX11-223ENST00000542838 FAM71F2Q6NXP2 309 aa10.35□□□□□ -0.75
DDX11-223ENST00000542838 C1RLQ9NZP8 487 aa10.35□□□□□ -0.75
DDX11-223ENST00000542838 IGHV3-72A0A0B4J1Y9 119 aa10.35□□□□□ -0.75
DDX11-223ENST00000542838 M0R296 226 aa10.35□□□□□ -0.75
DDX11-223ENST00000542838 CRYGCP07315 174 aa10.35□□□□□ -0.75
DDX11-223ENST00000542838 GP9P14770 177 aa10.35□□□□□ -0.75
DDX11-223ENST00000542838 PPIAL4EA0A075B759 164 aa10.35□□□□□ -0.75
DDX11-223ENST00000542838 PPIAL4DF5H284 164 aa10.35□□□□□ -0.75
DDX11-223ENST00000542838 PPIAL4FP0DN26 164 aa10.35□□□□□ -0.75
DDX11-223ENST00000542838 OR4C5Q8NGB2 326 aa10.35□□□□□ -0.75
DDX11-223ENST00000542838 GFRA4Q9GZZ7 299 aa10.35□□□□□ -0.75
DDX11-223ENST00000542838 TMEM191AQ9H0A3 160 aa10.35□□□□□ -0.75
DDX11-223ENST00000542838 LOC102724200A0A096LPH7 203 aaPredicted RBP10.34□□□□□ -0.75
DDX11-223ENST00000542838 C17orf100A8MU93 164 aa10.34□□□□□ -0.75
DDX11-223ENST00000542838 COL8A1P27658 744 aa10.34□□□□□ -0.75
DDX11-223ENST00000542838 MRGPRG-AS1Q2M3A8 158 aa10.34□□□□□ -0.75
DDX11-223ENST00000542838 LYPD2Q6UXB3 125 aa10.34□□□□□ -0.75
DDX11-223ENST00000542838 LINC00311Q8N616 119 aa10.34□□□□□ -0.75
DDX11-223ENST00000542838 LOC105371242A0A075B767 164 aa10.34□□□□□ -0.75
DDX11-223ENST00000542838 IGHV2-70DA0A0C4DH43 119 aa10.34□□□□□ -0.75
DDX11-223ENST00000542838 HSBP1L1C9JCN9 74 aa10.34□□□□□ -0.75
DDX11-223ENST00000542838 NDUFB3O43676 98 aa10.34□□□□□ -0.75
DDX11-223ENST00000542838 VAMP3Q15836 100 aa10.34□□□□□ -0.75
DDX11-223ENST00000542838 ERASQ7Z444 233 aa10.34□□□□□ -0.75
DDX11-223ENST00000542838 GSX1Q9H4S2 264 aaPredicted RBP10.34□□□□□ -0.75
DDX11-223ENST00000542838 TRAV8-1A0A0A6YYK1 113 aa10.33□□□□□ -0.76
DDX11-223ENST00000542838 H0Y8G0 127 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms