RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 C5orf49A4QMS7 147 aa9.09□□□□□ -0.95
CDH3-203ENST00000542274 NPFFO15130 113 aa9.09□□□□□ -0.95
CDH3-203ENST00000542274 IGHV3-7P01780 117 aa9.09□□□□□ -0.95
CDH3-203ENST00000542274 HRCT1Q6UXD1 115 aa9.09□□□□□ -0.95
CDH3-203ENST00000542274 RASL10AQ92737 203 aa9.09□□□□□ -0.95
CDH3-203ENST00000542274 LSM10Q969L4 123 aaKnown RBP9.09□□□□□ -0.95
CDH3-203ENST00000542274 FGF23Q9GZV9 251 aaPredicted RBP9.09□□□□□ -0.95
CDH3-203ENST00000542274 ARHGAP21Q5T5U3 1957 aa9.08□□□□□ -0.96
CDH3-203ENST00000542274 C2orf70A6NJV1 201 aa9.08□□□□□ -0.96
CDH3-203ENST00000542274 SYS1-DBNDD2H3BUS1 97 aa9.08□□□□□ -0.96
CDH3-203ENST00000542274 SLC25A5P05141 298 aaKnown RBP9.08□□□□□ -0.96
CDH3-203ENST00000542274 RBMXP38159 391 aaKnown RBP9.08□□□□□ -0.96
CDH3-203ENST00000542274 CXorf66Q5JRM2 361 aaPredicted RBP9.08□□□□□ -0.96
CDH3-203ENST00000542274 ZDHHC16Q969W1 377 aa9.08□□□□□ -0.96
CDH3-203ENST00000542274 MRPL24Q96A35 216 aaKnown RBP9.08□□□□□ -0.96
CDH3-203ENST00000542274 BORCS8Q96FH0 119 aa9.08□□□□□ -0.96
CDH3-203ENST00000542274 A0A1B0GWB2 263 aa9.08□□□□□ -0.96
CDH3-203ENST00000542274 H3BMG7 143 aa9.08□□□□□ -0.96
CDH3-203ENST00000542274 K7EM74 188 aa9.08□□□□□ -0.96
CDH3-203ENST00000542274 KRTAP27-1Q3LI81 207 aa9.08□□□□□ -0.96
CDH3-203ENST00000542274 Q6ZSR3 168 aa9.08□□□□□ -0.96
CDH3-203ENST00000542274 ZNF502Q8TBZ5 544 aa9.08□□□□□ -0.96
CDH3-203ENST00000542274 MBD3L1Q8WWY6 194 aa9.08□□□□□ -0.96
CDH3-203ENST00000542274 Q96M66 194 aa9.08□□□□□ -0.96
CDH3-203ENST00000542274 C18orf15Q96N68 181 aa9.08□□□□□ -0.96
CDH3-203ENST00000542274 LIME1Q9H400 295 aa9.08□□□□□ -0.96
CDH3-203ENST00000542274 PKIGQ9Y2B9 76 aa9.08□□□□□ -0.96
CDH3-203ENST00000542274 PTPRQQ9UMZ3 2332 aa9.07□□□□□ -0.96
CDH3-203ENST00000542274 IGKV3D-15A0A087WSY6 115 aa9.07□□□□□ -0.96
CDH3-203ENST00000542274 TRAV5A0A0B4J249 113 aa9.07□□□□□ -0.96
CDH3-203ENST00000542274 PITX3O75364 302 aa9.07□□□□□ -0.96
CDH3-203ENST00000542274 TIRAPP58753 221 aa9.07□□□□□ -0.96
CDH3-203ENST00000542274 TMEM171Q8WVE6 324 aa9.07□□□□□ -0.96
CDH3-203ENST00000542274 IL36RNQ9UBH0 155 aa9.07□□□□□ -0.96
CDH3-203ENST00000542274 DOCK11Q5JSL3 2073 aa9.07□□□□□ -0.96
CDH3-203ENST00000542274 TRGV5A0A0B4J1U4 118 aa9.07□□□□□ -0.96
CDH3-203ENST00000542274 IGHG3P01860 377 aa9.07□□□□□ -0.96
CDH3-203ENST00000542274 IGLC6P0CF74 106 aa9.07□□□□□ -0.96
CDH3-203ENST00000542274 MYOD1P15172 320 aa9.07□□□□□ -0.96
CDH3-203ENST00000542274 ORM2P19652 201 aa9.07□□□□□ -0.96
CDH3-203ENST00000542274 C4orf26Q17RF5 130 aa9.07□□□□□ -0.96
CDH3-203ENST00000542274 GAGE13Q4V321 117 aa9.07□□□□□ -0.96
CDH3-203ENST00000542274 Q6ZPA2 131 aa9.07□□□□□ -0.96
CDH3-203ENST00000542274 KIR3DL3Q8N743 410 aa9.07□□□□□ -0.96
CDH3-203ENST00000542274 TMEM70Q9BUB7 260 aa9.07□□□□□ -0.96
CDH3-203ENST00000542274 ANAPC10Q9UM13 185 aa9.07□□□□□ -0.96
CDH3-203ENST00000542274 CHD8Q9HCK8 2581 aa9.07□□□□□ -0.96
CDH3-203ENST00000542274 OR9G9P0C7N8 305 aa9.06□□□□□ -0.96
CDH3-203ENST00000542274 ZNF90Q03938 601 aa9.06□□□□□ -0.96
CDH3-203ENST00000542274 ZNF415Q09FC8 603 aa9.06□□□□□ -0.96
CDH3-203ENST00000542274 DAZAP2Q15038 168 aaPredicted RBP9.06□□□□□ -0.96
CDH3-203ENST00000542274 TBC1D28Q2M2D7 210 aa9.06□□□□□ -0.96
CDH3-203ENST00000542274 IBA57Q5T440 356 aaKnown RBP9.06□□□□□ -0.96
CDH3-203ENST00000542274 SHANK1Q9Y566 2161 aa9.06□□□□□ -0.96
CDH3-203ENST00000542274 IGHV3-64DA0A0J9YX35 117 aa9.06□□□□□ -0.96
CDH3-203ENST00000542274 A0A1B0GX51 115 aa9.06□□□□□ -0.96
CDH3-203ENST00000542274 FRMD6-AS1P0C7T7 363 aa9.06□□□□□ -0.96
CDH3-203ENST00000542274 GLI4P10075 376 aa9.06□□□□□ -0.96
CDH3-203ENST00000542274 SLC35B1P78383 322 aa9.06□□□□□ -0.96
CDH3-203ENST00000542274 PRR30Q53SZ7 412 aaPredicted RBP9.06□□□□□ -0.96
CDH3-203ENST00000542274 ZNF695Q8IW36 515 aa9.06□□□□□ -0.96
CDH3-203ENST00000542274 FGFRL1Q8N441 504 aa9.06□□□□□ -0.96
CDH3-203ENST00000542274 PMCHL2Q9BQD1 86 aa9.06□□□□□ -0.96
CDH3-203ENST00000542274 MDFICQ9P1T7 246 aa9.06□□□□□ -0.96
CDH3-203ENST00000542274 FAM90A26D6RGX4 464 aa9.05□□□□□ -0.96
CDH3-203ENST00000542274 HSPB6O14558 160 aa9.05□□□□□ -0.96
CDH3-203ENST00000542274 NXPH3O95157 252 aa9.05□□□□□ -0.96
CDH3-203ENST00000542274 COX8AP10176 69 aa9.05□□□□□ -0.96
CDH3-203ENST00000542274 TESK1Q15569 626 aa9.05□□□□□ -0.96
CDH3-203ENST00000542274 OR1L1Q8NH94 360 aa9.05□□□□□ -0.96
CDH3-203ENST00000542274 IDI2-AS1Q9NZ38 188 aa9.05□□□□□ -0.96
CDH3-203ENST00000542274 NCOR2Q9Y618 2525 aa9.05□□□□□ -0.96
CDH3-203ENST00000542274 CEACAM18A8MTB9 384 aa9.05□□□□□ -0.96
CDH3-203ENST00000542274 HSBP1O75506 76 aa9.05□□□□□ -0.96
CDH3-203ENST00000542274 C8orf88P0DMB2 117 aa9.05□□□□□ -0.96
CDH3-203ENST00000542274 PCBD1P61457 104 aa9.05□□□□□ -0.96
CDH3-203ENST00000542274 MALLQ13021 153 aa9.05□□□□□ -0.96
CDH3-203ENST00000542274 NMSQ5H8A3 153 aa9.05□□□□□ -0.96
CDH3-203ENST00000542274 IGFL2Q6UWQ7 119 aa9.05□□□□□ -0.96
CDH3-203ENST00000542274 OCC1Q8TAD7 63 aa9.05□□□□□ -0.96
CDH3-203ENST00000542274 SCGB3A2Q96PL1 93 aa9.05□□□□□ -0.96
CDH3-203ENST00000542274 C1QTNF5Q9BXJ0 243 aa9.05□□□□□ -0.96
CDH3-203ENST00000542274 RELNP78509 3460 aa9.05□□□□□ -0.96
CDH3-203ENST00000542274 RBP4P02753 201 aa9.04□□□□□ -0.96
CDH3-203ENST00000542274 ZNF726P1Q15940 193 aa9.04□□□□□ -0.96
CDH3-203ENST00000542274 PPP1R27Q86WC6 154 aa9.04□□□□□ -0.96
CDH3-203ENST00000542274 LHFPL1Q86WI0 220 aa9.04□□□□□ -0.96
CDH3-203ENST00000542274 GTSF1Q8WW33 167 aa9.04□□□□□ -0.96
CDH3-203ENST00000542274 RPRMQ9NS64 109 aa9.04□□□□□ -0.96
CDH3-203ENST00000542274 RABAC1Q9UI14 185 aa9.04□□□□□ -0.96
CDH3-203ENST00000542274 PRO0461Q9UI25 63 aa9.04□□□□□ -0.96
CDH3-203ENST00000542274 MPC1Q9Y5U8 109 aa9.04□□□□□ -0.96
CDH3-203ENST00000542274 TRAV17A0A0B4J275 112 aa9.04□□□□□ -0.96
CDH3-203ENST00000542274 NBR2O15453 112 aa9.04□□□□□ -0.96
CDH3-203ENST00000542274 OR5C1Q8NGR4 320 aa9.04□□□□□ -0.96
CDH3-203ENST00000542274 C10orf35Q96D05 121 aa9.04□□□□□ -0.96
CDH3-203ENST00000542274 PRO0628Q9UI54 55 aa9.04□□□□□ -0.96
CDH3-203ENST00000542274 ZNF785A8K8V0 405 aa9.03□□□□□ -0.96
CDH3-203ENST00000542274 PHF1O43189 567 aaPredicted RBP9.03□□□□□ -0.96
CDH3-203ENST00000542274 SMIM13P0DJ93 91 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms