RNA–Protein interactions for RNA: ENST00000542129.5

DDX11-218, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 1,561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-218ENST00000542129 OR5B12Q96R08 314 aa12.94□□□□□ -0.34
DDX11-218ENST00000542129 ANKRD34BA5PLL1 514 aa12.93□□□□□ -0.34
DDX11-218ENST00000542129 HMGB3O15347 200 aaKnown RBP12.93□□□□□ -0.34
DDX11-218ENST00000542129 SCGB2A1O75556 95 aa12.93□□□□□ -0.34
DDX11-218ENST00000542129 NDUFA7O95182 113 aa12.93□□□□□ -0.34
DDX11-218ENST00000542129 FABP1P07148 127 aa12.93□□□□□ -0.34
DDX11-218ENST00000542129 YPEL3P61236 119 aaPredicted RBP12.93□□□□□ -0.34
DDX11-218ENST00000542129 LYZP61626 148 aa12.93□□□□□ -0.34
DDX11-218ENST00000542129 SPATA31B1PQ5VZV4 182 aa12.93□□□□□ -0.34
DDX11-218ENST00000542129 ZNF491Q8N8L2 437 aa12.93□□□□□ -0.34
DDX11-218ENST00000542129 MYOZ3Q8TDC0 251 aa12.93□□□□□ -0.34
DDX11-218ENST00000542129 HRH4Q9H3N8 390 aa12.93□□□□□ -0.34
DDX11-218ENST00000542129 GAR1Q9NY12 217 aaKnown RBP12.93□□□□□ -0.34
DDX11-218ENST00000542129 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.92□□□□□ -0.34
DDX11-218ENST00000542129 ORM2P19652 201 aa12.92□□□□□ -0.34
DDX11-218ENST00000542129 CDC34P49427 236 aaPredicted RBP12.92□□□□□ -0.34
DDX11-218ENST00000542129 HIST2H2BDQ6DRA6 164 aa12.92□□□□□ -0.34
DDX11-218ENST00000542129 ZNF343Q6P1L6 599 aa12.92□□□□□ -0.34
DDX11-218ENST00000542129 PATE2Q6UY27 113 aa12.92□□□□□ -0.34
DDX11-218ENST00000542129 RNF152Q8N8N0 203 aa12.92□□□□□ -0.34
DDX11-218ENST00000542129 OR1B1Q8NGR6 318 aa12.92□□□□□ -0.34
DDX11-218ENST00000542129 TMEM37Q8WXS4 190 aa12.92□□□□□ -0.34
DDX11-218ENST00000542129 ZNF414Q96IQ9 312 aa12.92□□□□□ -0.34
DDX11-218ENST00000542129 PBDC1Q9BVG4 233 aa12.92□□□□□ -0.34
DDX11-218ENST00000542129 ACTR3CQ9C0K3 210 aaPredicted RBP12.92□□□□□ -0.34
DDX11-218ENST00000542129 COX7A2P2O60397 106 aa12.91□□□□□ -0.34
DDX11-218ENST00000542129 H2AFB1P0C5Y9 115 aa12.91□□□□□ -0.34
DDX11-218ENST00000542129 OR5G3P0C626 314 aa12.91□□□□□ -0.34
DDX11-218ENST00000542129 ARL3P36405 182 aa12.91□□□□□ -0.34
DDX11-218ENST00000542129 TCTEX1D4Q5JR98 221 aa12.91□□□□□ -0.34
DDX11-218ENST00000542129 LCN15Q6UWW0 184 aa12.91□□□□□ -0.34
DDX11-218ENST00000542129 COMMD1Q8N668 190 aa12.91□□□□□ -0.34
DDX11-218ENST00000542129 OR51G1Q8NGK1 321 aa12.91□□□□□ -0.34
DDX11-218ENST00000542129 WIPF2Q8TF74 440 aaPredicted RBP12.91□□□□□ -0.34
DDX11-218ENST00000542129 SEPSECSQ9HD40 501 aaKnown RBP12.91□□□□□ -0.34
DDX11-218ENST00000542129 CTXND1A0A1B0GTU2 59 aa12.9□□□□□ -0.34
DDX11-218ENST00000542129 A0A1W2PPV4 95 aa12.9□□□□□ -0.34
DDX11-218ENST00000542129 SEC14L6B5MCN3 397 aa12.9□□□□□ -0.34
DDX11-218ENST00000542129 HAX1O00165 279 aa12.9□□□□□ -0.34
DDX11-218ENST00000542129 IL4P05112 153 aa12.9□□□□□ -0.34
DDX11-218ENST00000542129 FGF8P55075 233 aaPredicted RBP12.9□□□□□ -0.34
DDX11-218ENST00000542129 FAM78BQ5VT40 261 aa12.9□□□□□ -0.34
DDX11-218ENST00000542129 OR1L4Q8NGR5 311 aa12.9□□□□□ -0.34
DDX11-218ENST00000542129 Q8WTZ3 238 aa12.9□□□□□ -0.34
DDX11-218ENST00000542129 SFT2D1Q8WV19 159 aa12.9□□□□□ -0.34
DDX11-218ENST00000542129 RAB24Q969Q5 203 aa12.9□□□□□ -0.34
DDX11-218ENST00000542129 UHRF2Q96PU4 802 aa12.9□□□□□ -0.34
DDX11-218ENST00000542129 ATP6V0BQ99437 205 aa12.9□□□□□ -0.34
DDX11-218ENST00000542129 PUS1Q9Y606 427 aaKnown RBP eCLIP12.9□□□□□ -0.34
DDX11-218ENST00000542129 NF1P21359 2839 aa12.9□□□□□ -0.34
DDX11-218ENST00000542129 IGHV3OR16-8A0A075B7F1 116 aa12.9□□□□□ -0.35
DDX11-218ENST00000542129 MAP1LC3B2A6NCE7 125 aa12.9□□□□□ -0.35
DDX11-218ENST00000542129 PLP1P60201 277 aa12.9□□□□□ -0.35
DDX11-218ENST00000542129 C10orf113Q5VZT2 155 aa12.9□□□□□ -0.35
DDX11-218ENST00000542129 SPSB3Q6PJ21 355 aa12.9□□□□□ -0.35
DDX11-218ENST00000542129 ZNF600Q6ZNG1 722 aa12.9□□□□□ -0.35
DDX11-218ENST00000542129 MIR17HGQ75NE6 70 aa12.9□□□□□ -0.35
DDX11-218ENST00000542129 OR4F5Q8NH21 305 aa12.9□□□□□ -0.35
DDX11-218ENST00000542129 RNF125Q96EQ8 232 aa12.9□□□□□ -0.35
DDX11-218ENST00000542129 PFDN5Q99471 154 aa12.9□□□□□ -0.35
DDX11-218ENST00000542129 MAP1LC3BQ9GZQ8 125 aa12.9□□□□□ -0.35
DDX11-218ENST00000542129 DNAJC4Q9NNZ3 241 aa12.9□□□□□ -0.35
DDX11-218ENST00000542129 RNF114Q9Y508 228 aa12.9□□□□□ -0.35
DDX11-218ENST00000542129 WI2-2373I1.2A0A1W2PRP0 233 aa12.89□□□□□ -0.35
DDX11-218ENST00000542129 HYPMO75409 117 aa12.89□□□□□ -0.35
DDX11-218ENST00000542129 RHOBP62745 196 aa12.89□□□□□ -0.35
DDX11-218ENST00000542129 KHDC1LQ5JSQ8 128 aa12.89□□□□□ -0.35
DDX11-218ENST00000542129 MORN5Q5VZ52 161 aa12.89□□□□□ -0.35
DDX11-218ENST00000542129 C18orf65Q6ZTR6 163 aa12.89□□□□□ -0.35
DDX11-218ENST00000542129 C11orf44Q8N8P7 122 aa12.89□□□□□ -0.35
DDX11-218ENST00000542129 GATAD1Q8WUU5 269 aa12.89□□□□□ -0.35
DDX11-218ENST00000542129 MBD3L1Q8WWY6 194 aa12.89□□□□□ -0.35
DDX11-218ENST00000542129 UBE2E2Q96LR5 201 aa12.89□□□□□ -0.35
DDX11-218ENST00000542129 FUT9Q9Y231 359 aa12.89□□□□□ -0.35
DDX11-218ENST00000542129 LINC00862A6NCI5 91 aa12.88□□□□□ -0.35
DDX11-218ENST00000542129 BMPR1BO00238 502 aa12.88□□□□□ -0.35
DDX11-218ENST00000542129 OR2C1O95371 312 aa12.88□□□□□ -0.35
DDX11-218ENST00000542129 LGALS1P09382 135 aaKnown RBP12.88□□□□□ -0.35
DDX11-218ENST00000542129 USF2Q15853 346 aaPredicted RBP12.88□□□□□ -0.35
DDX11-218ENST00000542129 TOMM20LQ6UXN7 152 aa12.88□□□□□ -0.35
DDX11-218ENST00000542129 SLC7A5P1Q8MH63 180 aa12.88□□□□□ -0.35
DDX11-218ENST00000542129 LYPD6BQ8NI32 183 aa12.88□□□□□ -0.35
DDX11-218ENST00000542129 PEF1Q9UBV8 284 aaKnown RBP12.88□□□□□ -0.35
DDX11-218ENST00000542129 HIGD1AQ9Y241 93 aa12.88□□□□□ -0.35
DDX11-218ENST00000542129 ELOA3CA0A087WX78 387 aaPredicted RBP12.87□□□□□ -0.35
DDX11-218ENST00000542129 CLPSL1A2RUU4 121 aa12.87□□□□□ -0.35
DDX11-218ENST00000542129 CD28P10747 220 aa12.87□□□□□ -0.35
DDX11-218ENST00000542129 CCL20P78556 96 aa12.87□□□□□ -0.35
DDX11-218ENST00000542129 RELQ04864 619 aaPredicted RBP12.87□□□□□ -0.35
DDX11-218ENST00000542129 LINC00305Q7Z4B0 112 aa12.87□□□□□ -0.35
DDX11-218ENST00000542129 RNF2Q99496 336 aa12.87□□□□□ -0.35
DDX11-218ENST00000542129 C19orf24Q9BVV8 132 aa12.87□□□□□ -0.35
DDX11-218ENST00000542129 ZFAND3Q9H8U3 227 aa12.87□□□□□ -0.35
DDX11-218ENST00000542129 MRPL27Q9P0M9 148 aaKnown RBP12.87□□□□□ -0.35
DDX11-218ENST00000542129 C2CD3Q4AC94 2353 aa12.86□□□□□ -0.35
DDX11-218ENST00000542129 TRAV5A0A0B4J249 113 aa12.86□□□□□ -0.35
DDX11-218ENST00000542129 PROK1P58294 105 aa12.86□□□□□ -0.35
DDX11-218ENST00000542129 COMMD7Q86VX2 200 aa12.86□□□□□ -0.35
DDX11-218ENST00000542129 MRPL32Q9BYC8 188 aaKnown RBP12.86□□□□□ -0.35
DDX11-218ENST00000542129 PFDN2Q9UHV9 154 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms