RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 ACOT7LQ6ZUV0 252 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 INO80EQ8NBZ0 244 aaPredicted RBP4.14□□□□□ -1.75
CPSF7-220ENST00000541963 VSTM2AQ8TAG5 236 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 SLC25A38Q96DW6 304 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 UBE2E2Q96LR5 201 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 PFDN5Q99471 154 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 FOXA2Q9Y261 457 aaPredicted RBP4.14□□□□□ -1.75
CPSF7-220ENST00000541963 VSIG4Q9Y279 399 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 KCNIP3Q9Y2W7 256 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 A0A0G2JLM5 398 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 MSGN1A6NI15 193 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 G3V318 75 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 G3V3Q6 166 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 H3BUA1 57 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 FCN1O00602 326 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 TAAR5O14804 337 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 ARPC1BO15143 372 aaKnown RBP4.13□□□□□ -1.75
CPSF7-220ENST00000541963 HRASP01112 189 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 PPYP01298 95 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 OR8U8P0C7N1 319 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 IGLL1P15814 213 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 S100GP29377 79 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 CRIP2P52943 208 aaPredicted RBP4.13□□□□□ -1.75
CPSF7-220ENST00000541963 PAX9P55771 341 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 UBE2MP61081 183 aaKnown RBP4.13□□□□□ -1.75
CPSF7-220ENST00000541963 UBE2KP61086 200 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 GNB1P62873 340 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 CATR1Q13166 79 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 KPRPQ5T749 579 aaPredicted RBP4.13□□□□□ -1.75
CPSF7-220ENST00000541963 DHRS11Q6UWP2 260 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 GVQW1Q8N7I0 195 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 ZNF491Q8N8L2 437 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 LFNGQ8NES3 379 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 BPIFCQ8NFQ6 507 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 OR1N2Q8NGR9 330 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 OR5H2Q8NGV7 314 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 OR4S2Q8NH73 311 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 CD300LFQ8TDQ1 290 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 C4orf3Q8WVX3 66 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 ARPC1AQ92747 370 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 CXorf58Q96LI9 332 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 PHB2Q99623 299 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 C2orf88Q9BSF0 95 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 HRASLSQ9HDD0 168 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 ZNF355PQ9NSJ1 428 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 TRRAPQ9Y4A5 3859 aa4.13□□□□□ -1.75
CPSF7-220ENST00000541963 PLXNB1O43157 2135 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 FXYD6-FXYD2A0A087WZ82 144 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 MEIS3P1A6NDR6 274 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 FAM74A7A6NL05 159 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 RAMP3O60896 148 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 GGCTO75223 188 aaKnown RBP4.12□□□□□ -1.75
CPSF7-220ENST00000541963 BRI3O95415 125 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 IGLV2-23P01705 113 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 PMP2P02689 132 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 TRGV3P03979 118 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 HSPB1P04792 205 aaKnown RBP4.12□□□□□ -1.75
CPSF7-220ENST00000541963 IFNA6P05013 189 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 EIF4EP06730 217 aaKnown RBP4.12□□□□□ -1.75
CPSF7-220ENST00000541963 FCER2P06734 321 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 CRYGBP07316 175 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 TBPP20226 339 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 MAS1LP35410 378 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 TPPP2P59282 170 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 TAS2R19P59542 299 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 FXYD4P59646 89 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 PKIAP61925 76 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 RUNX1Q01196 453 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 ZNF616Q08AN1 781 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 PJVKQ0ZLH3 352 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 TNXAQ16473 311 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 PRSS8Q16651 343 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 HAGHQ16775 308 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 FAM74A3Q4VXF1 159 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 RNASE10Q5GAN6 216 aaKnown RBP4.12□□□□□ -1.75
CPSF7-220ENST00000541963 C9orf66Q5T8R8 295 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 COX8CQ7Z4L0 72 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 ZNF546Q86UE3 836 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 SLC25A42Q86VD7 318 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 CMTM1Q8IZ96 169 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 PUSL1Q8N0Z8 303 aaKnown RBP4.12□□□□□ -1.75
CPSF7-220ENST00000541963 OR5T1Q8NG75 326 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 OR11H1Q8NG94 326 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 OR4A5Q8NH83 315 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 TMEM190Q8WZ59 177 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 RBMXL1Q96E39 390 aaKnown RBP4.12□□□□□ -1.75
CPSF7-220ENST00000541963 P2RX4Q99571 388 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 SPIN2AQ99865 258 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 SPIN2BQ9BPZ2 258 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 ZNF2Q9BSG1 426 aaPredicted RBP4.12□□□□□ -1.75
CPSF7-220ENST00000541963 FAM103A1Q9BTL3 118 aaKnown RBP4.12□□□□□ -1.75
CPSF7-220ENST00000541963 FXYD6Q9H0Q3 95 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 CCL28Q9NRJ3 127 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 EHFQ9NZC4 300 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 CMYA5Q8N3K9 4069 aa4.12□□□□□ -1.75
CPSF7-220ENST00000541963 TENM1Q9UKZ4 2725 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 FBN3Q75N90 2809 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 IGKV1D-13A0A0B4J2D9 117 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 C9orf170A2RU37 121 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 SRRM4A7MD48 611 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms