RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 KRTAP10-11P60412 298 aa6.59□□□□□ -1.35
CHD4-208ENST00000540960 PRR20EP86478 221 aa6.59□□□□□ -1.35
CHD4-208ENST00000540960 PRR20CP86479 221 aa6.59□□□□□ -1.35
CHD4-208ENST00000540960 PRR20DP86480 221 aa6.59□□□□□ -1.35
CHD4-208ENST00000540960 PRR20BP86481 221 aa6.59□□□□□ -1.35
CHD4-208ENST00000540960 PRR20AP86496 221 aa6.59□□□□□ -1.35
CHD4-208ENST00000540960 MEF2BQ02080 365 aaPredicted RBP6.59□□□□□ -1.35
CHD4-208ENST00000540960 WT1-ASQ06250 92 aa6.59□□□□□ -1.35
CHD4-208ENST00000540960 ACSM6Q6P461 480 aa6.59□□□□□ -1.35
CHD4-208ENST00000540960 CYP2G1PQ6ZSU1 146 aa6.59□□□□□ -1.35
CHD4-208ENST00000540960 Q8N6K4 173 aa6.59□□□□□ -1.35
CHD4-208ENST00000540960 STPG3Q8N7X2 389 aa6.59□□□□□ -1.35
CHD4-208ENST00000540960 ARPC1AQ92747 370 aa6.59□□□□□ -1.35
CHD4-208ENST00000540960 ATP6V0BQ99437 205 aa6.59□□□□□ -1.35
CHD4-208ENST00000540960 MGST2Q99735 147 aa6.59□□□□□ -1.35
CHD4-208ENST00000540960 TXN2Q99757 166 aa6.59□□□□□ -1.35
CHD4-208ENST00000540960 FBXL15Q9H469 300 aa6.59□□□□□ -1.35
CHD4-208ENST00000540960 DNAJC4Q9NNZ3 241 aa6.59□□□□□ -1.35
CHD4-208ENST00000540960 SMCO4Q9NRQ5 59 aa6.59□□□□□ -1.35
CHD4-208ENST00000540960 COX7A2P2O60397 106 aa6.58□□□□□ -1.36
CHD4-208ENST00000540960 STAG3L2P0CL84 134 aa6.58□□□□□ -1.36
CHD4-208ENST00000540960 STAG3L3P0CL85 134 aa6.58□□□□□ -1.36
CHD4-208ENST00000540960 IGHV4-38-2P0DP08 117 aa6.58□□□□□ -1.36
CHD4-208ENST00000540960 OR10J1P30954 320 aa6.58□□□□□ -1.36
CHD4-208ENST00000540960 SAA4P35542 130 aa6.58□□□□□ -1.36
CHD4-208ENST00000540960 HAGHQ16775 308 aa6.58□□□□□ -1.36
CHD4-208ENST00000540960 FAM209BQ5JX69 171 aa6.58□□□□□ -1.36
CHD4-208ENST00000540960 TTC9CQ8N5M4 171 aa6.58□□□□□ -1.36
CHD4-208ENST00000540960 CLRN3Q8NCR9 226 aa6.58□□□□□ -1.36
CHD4-208ENST00000540960 OR10W1Q8NGF6 305 aa6.58□□□□□ -1.36
CHD4-208ENST00000540960 OR4X1Q8NH49 305 aa6.58□□□□□ -1.36
CHD4-208ENST00000540960 TMEM170AQ8WVE7 144 aa6.58□□□□□ -1.36
CHD4-208ENST00000540960 SSMEM1Q8WWF3 244 aa6.58□□□□□ -1.36
CHD4-208ENST00000540960 TVP23CQ96ET8 276 aa6.58□□□□□ -1.36
CHD4-208ENST00000540960 MISP3Q96FF7 219 aa6.58□□□□□ -1.36
CHD4-208ENST00000540960 ACY3Q96HD9 319 aa6.58□□□□□ -1.36
CHD4-208ENST00000540960 BTF3L4Q96K17 158 aa6.58□□□□□ -1.36
CHD4-208ENST00000540960 SSX3Q99909 188 aa6.58□□□□□ -1.36
CHD4-208ENST00000540960 MEGF9Q9H1U4 602 aa6.58□□□□□ -1.36
CHD4-208ENST00000540960 TUBA4BQ9H853 241 aa6.58□□□□□ -1.36
CHD4-208ENST00000540960 FUT9Q9Y231 359 aa6.58□□□□□ -1.36
CHD4-208ENST00000540960 DSCAML1Q8TD84 2053 aa6.57□□□□□ -1.36
CHD4-208ENST00000540960 ABCA13Q86UQ4 5058 aa6.57□□□□□ -1.36
CHD4-208ENST00000540960 A0A087WWC5 75 aa6.57□□□□□ -1.36
CHD4-208ENST00000540960 CENPVL3A0A0U1RRI6 287 aa6.57□□□□□ -1.36
CHD4-208ENST00000540960 CXorf65A6NEN9 183 aa6.57□□□□□ -1.36
CHD4-208ENST00000540960 TEX22C9J3V5 150 aa6.57□□□□□ -1.36
CHD4-208ENST00000540960 M0R036 132 aa6.57□□□□□ -1.36
CHD4-208ENST00000540960 SRP19P09132 144 aaKnown RBP6.57□□□□□ -1.36
CHD4-208ENST00000540960 C8orf88P0DMB2 117 aa6.57□□□□□ -1.36
CHD4-208ENST00000540960 CTRB1P17538 263 aa6.57□□□□□ -1.36
CHD4-208ENST00000540960 PAX6P26367 422 aa6.57□□□□□ -1.36
CHD4-208ENST00000540960 MFAP4P55083 255 aa6.57□□□□□ -1.36
CHD4-208ENST00000540960 KLRD1Q13241 179 aa6.57□□□□□ -1.36
CHD4-208ENST00000540960 ICAM4Q14773 271 aa6.57□□□□□ -1.36
CHD4-208ENST00000540960 C10orf113Q5VZT2 155 aa6.57□□□□□ -1.36
CHD4-208ENST00000540960 MIC13Q5XKP0 118 aa6.57□□□□□ -1.36
CHD4-208ENST00000540960 ZFAND6Q6FIF0 208 aa6.57□□□□□ -1.36
CHD4-208ENST00000540960 CTRB2Q6GPI1 263 aa6.57□□□□□ -1.36
CHD4-208ENST00000540960 LHFPL4Q7Z7J7 247 aa6.57□□□□□ -1.36
CHD4-208ENST00000540960 IQCF2Q8IXL9 164 aa6.57□□□□□ -1.36
CHD4-208ENST00000540960 VN1R17PQ8TDU5 208 aa6.57□□□□□ -1.36
CHD4-208ENST00000540960 RXFP4Q8TDU9 374 aa6.57□□□□□ -1.36
CHD4-208ENST00000540960 WNT10AQ9GZT5 417 aa6.57□□□□□ -1.36
CHD4-208ENST00000540960 CTDSP1Q9GZU7 261 aa6.57□□□□□ -1.36
CHD4-208ENST00000540960 SLC25A22Q9H936 323 aa6.57□□□□□ -1.36
CHD4-208ENST00000540960 MOB4Q9Y3A3 225 aa6.57□□□□□ -1.36
CHD4-208ENST00000540960 A0A1W2PRD5 423 aa6.56□□□□□ -1.36
CHD4-208ENST00000540960 A0A1W2PRF3 423 aa6.56□□□□□ -1.36
CHD4-208ENST00000540960 A0A1W2PRM7 423 aa6.56□□□□□ -1.36
CHD4-208ENST00000540960 HYPMO75409 117 aa6.56□□□□□ -1.36
CHD4-208ENST00000540960 OR5G3P0C626 314 aa6.56□□□□□ -1.36
CHD4-208ENST00000540960 LINC00869P0C866 280 aa6.56□□□□□ -1.36
CHD4-208ENST00000540960 AREGP15514 252 aa6.56□□□□□ -1.36
CHD4-208ENST00000540960 IGLL1P15814 213 aa6.56□□□□□ -1.36
CHD4-208ENST00000540960 FCGR2BP31994 310 aaPredicted RBP6.56□□□□□ -1.36
CHD4-208ENST00000540960 RND2P52198 227 aa6.56□□□□□ -1.36
CHD4-208ENST00000540960 PLP1P60201 277 aa6.56□□□□□ -1.36
CHD4-208ENST00000540960 CX3CL1P78423 397 aa6.56□□□□□ -1.36
CHD4-208ENST00000540960 CCL20P78556 96 aa6.56□□□□□ -1.36
CHD4-208ENST00000540960 ZNF726P1Q15940 193 aa6.56□□□□□ -1.36
CHD4-208ENST00000540960 DEFB112Q30KQ8 113 aa6.56□□□□□ -1.36
CHD4-208ENST00000540960 FAM78BQ5VT40 261 aa6.56□□□□□ -1.36
CHD4-208ENST00000540960 C11orf44Q8N8P7 122 aa6.56□□□□□ -1.36
CHD4-208ENST00000540960 OR5R1Q8NH85 324 aa6.56□□□□□ -1.36
CHD4-208ENST00000540960 NPIPB3Q92617 1050 aa6.56□□□□□ -1.36
CHD4-208ENST00000540960 RITA1Q96K30 269 aa6.56□□□□□ -1.36
CHD4-208ENST00000540960 SCRT1Q9BWW7 348 aa6.56□□□□□ -1.36
CHD4-208ENST00000540960 TMEM231Q9H6L2 316 aa6.56□□□□□ -1.36
CHD4-208ENST00000540960 TMEM242Q9NWH2 141 aa6.56□□□□□ -1.36
CHD4-208ENST00000540960 UBR4Q5T4S7 5183 aa6.55□□□□□ -1.36
CHD4-208ENST00000540960 STARD9Q9P2P6 4700 aa6.55□□□□□ -1.36
CHD4-208ENST00000540960 A0A1B0GV50 99 aa6.55□□□□□ -1.36
CHD4-208ENST00000540960 A0A1W2PRE2 83 aa6.55□□□□□ -1.36
CHD4-208ENST00000540960 CGB1A6NKQ9 187 aa6.55□□□□□ -1.36
CHD4-208ENST00000540960 ZNF727A8MUV8 499 aa6.55□□□□□ -1.36
CHD4-208ENST00000540960 C11orf94C9JXX5 98 aa6.55□□□□□ -1.36
CHD4-208ENST00000540960 H3BQ15 152 aa6.55□□□□□ -1.36
CHD4-208ENST00000540960 H3BUA1 57 aa6.55□□□□□ -1.36
CHD4-208ENST00000540960 TGOLN2O43493 480 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms