RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 GPN1Q9HCN4 374 aaPredicted RBP6.9□□□□□ -1.3
SNHG1-215ENST00000540904 UBQLN2Q9UHD9 624 aa6.9□□□□□ -1.3
SNHG1-215ENST00000540904 U3KQK5 164 aa6.9□□□□□ -1.3
SNHG1-215ENST00000540904 DNAH3Q8TD57 4116 aa6.9□□□□□ -1.31
SNHG1-215ENST00000540904 IGKV1D-37A0A075B6S9 117 aa6.89□□□□□ -1.31
SNHG1-215ENST00000540904 A0A1W2PS18 150 aa6.89□□□□□ -1.31
SNHG1-215ENST00000540904 PRSS46E5RG02 174 aa6.89□□□□□ -1.31
SNHG1-215ENST00000540904 INMT-MINDY4F8WBC2 141 aa6.89□□□□□ -1.31
SNHG1-215ENST00000540904 METTL15P1P0C7V9 234 aa6.89□□□□□ -1.31
SNHG1-215ENST00000540904 PAX9P55771 341 aa6.89□□□□□ -1.31
SNHG1-215ENST00000540904 PAFAH1B2P68402 229 aa6.89□□□□□ -1.31
SNHG1-215ENST00000540904 AKR1C1Q04828 323 aa6.89□□□□□ -1.31
SNHG1-215ENST00000540904 USF2Q15853 346 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-215ENST00000540904 FAM90A2PQ658T7 463 aa6.89□□□□□ -1.31
SNHG1-215ENST00000540904 GSG1LQ6UXU4 331 aa6.89□□□□□ -1.31
SNHG1-215ENST00000540904 ACOT7LQ6ZUV0 252 aa6.89□□□□□ -1.31
SNHG1-215ENST00000540904 WFDC3Q8IUB2 231 aa6.89□□□□□ -1.31
SNHG1-215ENST00000540904 OR51G1Q8NGK1 321 aa6.89□□□□□ -1.31
SNHG1-215ENST00000540904 C2orf50Q96LR7 162 aa6.89□□□□□ -1.31
SNHG1-215ENST00000540904 PBDC1Q9BVG4 233 aa6.89□□□□□ -1.31
SNHG1-215ENST00000540904 RCL1Q9Y2P8 373 aaKnown RBP6.89□□□□□ -1.31
SNHG1-215ENST00000540904 LSM5Q9Y4Y9 91 aaKnown RBP6.89□□□□□ -1.31
SNHG1-215ENST00000540904 IGKV1OR2-108A0A075B7D4 117 aa6.88□□□□□ -1.31
SNHG1-215ENST00000540904 SMCO3A2RU48 225 aa6.88□□□□□ -1.31
SNHG1-215ENST00000540904 C7orf66A4D0T2 115 aa6.88□□□□□ -1.31
SNHG1-215ENST00000540904 RBMY1BA6NDE4 496 aaKnown RBP6.88□□□□□ -1.31
SNHG1-215ENST00000540904 RBMY1EA6NEQ0 496 aaKnown RBP6.88□□□□□ -1.31
SNHG1-215ENST00000540904 DNASE2O00115 360 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-215ENST00000540904 CCNKO75909 580 aa6.88□□□□□ -1.31
SNHG1-215ENST00000540904 CD5P06127 495 aa6.88□□□□□ -1.31
SNHG1-215ENST00000540904 FABP1P07148 127 aa6.88□□□□□ -1.31
SNHG1-215ENST00000540904 HNRNPCP07910 306 aaKnown RBP eCLIP6.88□□□□□ -1.31
SNHG1-215ENST00000540904 RBMY1DP0C7P1 496 aaKnown RBP6.88□□□□□ -1.31
SNHG1-215ENST00000540904 P2RY1P47900 373 aa6.88□□□□□ -1.31
SNHG1-215ENST00000540904 TAS2R30P59541 319 aa6.88□□□□□ -1.31
SNHG1-215ENST00000540904 RRAS2P62070 204 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-215ENST00000540904 OR2F1Q13607 317 aa6.88□□□□□ -1.31
SNHG1-215ENST00000540904 HAGHQ16775 308 aa6.88□□□□□ -1.31
SNHG1-215ENST00000540904 GRAMD2BQ96HH9 432 aa6.88□□□□□ -1.31
SNHG1-215ENST00000540904 TRGV9Q99603 122 aa6.88□□□□□ -1.31
SNHG1-215ENST00000540904 MARVELD1Q9BSK0 173 aa6.88□□□□□ -1.31
SNHG1-215ENST00000540904 MS4A6AQ9H2W1 248 aa6.88□□□□□ -1.31
SNHG1-215ENST00000540904 ZMAT4Q9H898 229 aa6.88□□□□□ -1.31
SNHG1-215ENST00000540904 RABAC1Q9UI14 185 aa6.88□□□□□ -1.31
SNHG1-215ENST00000540904 PMS2P5A8MQ11 134 aa6.87□□□□□ -1.31
SNHG1-215ENST00000540904 SNRPGP15A8MWD9 76 aa6.87□□□□□ -1.31
SNHG1-215ENST00000540904 K7EPK0 472 aa6.87□□□□□ -1.31
SNHG1-215ENST00000540904 L7N2F9 121 aa6.87□□□□□ -1.31
SNHG1-215ENST00000540904 GOSR2O14653 212 aa6.87□□□□□ -1.31
SNHG1-215ENST00000540904 PRAF2O60831 178 aa6.87□□□□□ -1.31
SNHG1-215ENST00000540904 TSC22D2O75157 780 aa6.87□□□□□ -1.31
SNHG1-215ENST00000540904 BCAP31P51572 246 aa6.87□□□□□ -1.31
SNHG1-215ENST00000540904 S100A10P60903 97 aa6.87□□□□□ -1.31
SNHG1-215ENST00000540904 LYZP61626 148 aa6.87□□□□□ -1.31
SNHG1-215ENST00000540904 VAMP2P63027 116 aa6.87□□□□□ -1.31
SNHG1-215ENST00000540904 ODF3L2Q3SX64 289 aa6.87□□□□□ -1.31
SNHG1-215ENST00000540904 TMEM14EPQ6UXP3 125 aa6.87□□□□□ -1.31
SNHG1-215ENST00000540904 LINC00322Q6ZN03 302 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-215ENST00000540904 APRG1Q8IVJ8 170 aa6.87□□□□□ -1.31
SNHG1-215ENST00000540904 THAP8Q8NA92 274 aa6.87□□□□□ -1.31
SNHG1-215ENST00000540904 STXBP6Q8NFX7 210 aa6.87□□□□□ -1.31
SNHG1-215ENST00000540904 OR10P1Q8NGE3 313 aa6.87□□□□□ -1.31
SNHG1-215ENST00000540904 RNF125Q96EQ8 232 aa6.87□□□□□ -1.31
SNHG1-215ENST00000540904 RCHY1Q96PM5 261 aa6.87□□□□□ -1.31
SNHG1-215ENST00000540904 CITED4Q96RK1 184 aa6.87□□□□□ -1.31
SNHG1-215ENST00000540904 TM2D3Q9BRN9 247 aa6.87□□□□□ -1.31
SNHG1-215ENST00000540904 U3KQE9 123 aa6.87□□□□□ -1.31
SNHG1-215ENST00000540904 LOC102724200A0A096LPH7 203 aaPredicted RBP6.86□□□□□ -1.31
SNHG1-215ENST00000540904 SIX6O95475 246 aa6.86□□□□□ -1.31
SNHG1-215ENST00000540904 EIF2B2P49770 351 aaKnown RBP6.86□□□□□ -1.31
SNHG1-215ENST00000540904 CAV2P51636 162 aa6.86□□□□□ -1.31
SNHG1-215ENST00000540904 RAB32Q13637 225 aa6.86□□□□□ -1.31
SNHG1-215ENST00000540904 C16orf54Q6UWD8 224 aa6.86□□□□□ -1.31
SNHG1-215ENST00000540904 TMEM144Q7Z5S9 345 aa6.86□□□□□ -1.31
SNHG1-215ENST00000540904 GLMPQ8WWB7 406 aa6.86□□□□□ -1.31
SNHG1-215ENST00000540904 FAM110AQ9BQ89 295 aa6.86□□□□□ -1.31
SNHG1-215ENST00000540904 SPATA25Q9BR10 227 aa6.86□□□□□ -1.31
SNHG1-215ENST00000540904 GGTLC1Q9BX51 225 aa6.86□□□□□ -1.31
SNHG1-215ENST00000540904 PFDN2Q9UHV9 154 aa6.86□□□□□ -1.31
SNHG1-215ENST00000540904 HELTA6NFD8 242 aa6.85□□□□□ -1.31
SNHG1-215ENST00000540904 BUB3O43684 328 aa6.85□□□□□ -1.31
SNHG1-215ENST00000540904 SSNA1O43805 119 aa6.85□□□□□ -1.31
SNHG1-215ENST00000540904 PVALBP20472 110 aaPredicted RBP6.85□□□□□ -1.31
SNHG1-215ENST00000540904 GATA2P23769 480 aaPredicted RBP6.85□□□□□ -1.31
SNHG1-215ENST00000540904 NUP62P37198 522 aaPredicted RBP6.85□□□□□ -1.31
SNHG1-215ENST00000540904 CMC4P56277 68 aaPredicted RBP6.85□□□□□ -1.31
SNHG1-215ENST00000540904 DLK1P80370 383 aa6.85□□□□□ -1.31
SNHG1-215ENST00000540904 ARL16Q0P5N6 197 aa6.85□□□□□ -1.31
SNHG1-215ENST00000540904 IL15RAQ13261 267 aa6.85□□□□□ -1.31
SNHG1-215ENST00000540904 ZNF124Q15973 351 aa6.85□□□□□ -1.31
SNHG1-215ENST00000540904 TMEM182Q6ZP80 229 aaPredicted RBP6.85□□□□□ -1.31
SNHG1-215ENST00000540904 FAM24BQ8N5W8 94 aa6.85□□□□□ -1.31
SNHG1-215ENST00000540904 PPP1R14BQ96C90 147 aa6.85□□□□□ -1.31
SNHG1-215ENST00000540904 WWC2-AS2Q96NR7 200 aa6.85□□□□□ -1.31
SNHG1-215ENST00000540904 MAP6D1Q9H9H5 199 aa6.85□□□□□ -1.31
SNHG1-215ENST00000540904 RETNQ9HD89 108 aa6.85□□□□□ -1.31
SNHG1-215ENST00000540904 MGAT4CQ9UBM8 478 aa6.85□□□□□ -1.31
SNHG1-215ENST00000540904 TRAV2A0A0B4J234 112 aa6.84□□□□□ -1.31
SNHG1-215ENST00000540904 FAM24AA6NFZ4 105 aa6.84□□□□□ -1.31
SNHG1-215ENST00000540904 K7EQG2 157 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms