RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 ZNF79Q15937 498 aa9.53□□□□□ -0.88
SEMA4D-223ENST00000540475 LGALS9CQ6DKI2 356 aa9.53□□□□□ -0.88
SEMA4D-223ENST00000540475 C11orf45Q8TAV5 145 aa9.53□□□□□ -0.88
SEMA4D-223ENST00000540475 SLC25A21Q9BQT8 299 aaPredicted RBP9.53□□□□□ -0.88
SEMA4D-223ENST00000540475 FAM90A26D6RGX4 464 aa9.52□□□□□ -0.89
SEMA4D-223ENST00000540475 LY6G6CO95867 125 aa9.52□□□□□ -0.89
SEMA4D-223ENST00000540475 IFNA10P01566 189 aa9.52□□□□□ -0.89
SEMA4D-223ENST00000540475 ZNF688P0C7X2 276 aa9.52□□□□□ -0.89
SEMA4D-223ENST00000540475 AP3S2P59780 193 aa9.52□□□□□ -0.89
SEMA4D-223ENST00000540475 DHRS2Q13268 280 aa9.52□□□□□ -0.89
SEMA4D-223ENST00000540475 GAMTQ14353 236 aa9.52□□□□□ -0.89
SEMA4D-223ENST00000540475 CCDC190Q86UF4 302 aa9.52□□□□□ -0.89
SEMA4D-223ENST00000540475 OR51G1Q8NGK1 321 aa9.52□□□□□ -0.89
SEMA4D-223ENST00000540475 ACY3Q96HD9 319 aa9.52□□□□□ -0.89
SEMA4D-223ENST00000540475 RAB40CQ96S21 281 aa9.52□□□□□ -0.89
SEMA4D-223ENST00000540475 DNAH17Q9UFH2 4485 aa9.52□□□□□ -0.89
SEMA4D-223ENST00000540475 HECTD4Q9Y4D8 3996 aa9.51□□□□□ -0.89
SEMA4D-223ENST00000540475 KNCNA6PVL3 124 aa9.51□□□□□ -0.89
SEMA4D-223ENST00000540475 MIFP14174 115 aa9.51□□□□□ -0.89
SEMA4D-223ENST00000540475 C4BPBP20851 252 aa9.51□□□□□ -0.89
SEMA4D-223ENST00000540475 TCTAP57738 103 aa9.51□□□□□ -0.89
SEMA4D-223ENST00000540475 NANOS2P60321 138 aaKnown RBP9.51□□□□□ -0.89
SEMA4D-223ENST00000540475 OR8G2PQ6IF36 304 aa9.51□□□□□ -0.89
SEMA4D-223ENST00000540475 TOMM5Q8N4H5 51 aa9.51□□□□□ -0.89
SEMA4D-223ENST00000540475 RNF125Q96EQ8 232 aa9.51□□□□□ -0.89
SEMA4D-223ENST00000540475 RBM38Q9H0Z9 239 aaKnown RBP9.51□□□□□ -0.89
SEMA4D-223ENST00000540475 NRN1Q9NPD7 142 aa9.51□□□□□ -0.89
SEMA4D-223ENST00000540475 TMED3Q9Y3Q3 217 aa9.51□□□□□ -0.89
SEMA4D-223ENST00000540475 X6R8D5 127 aa9.51□□□□□ -0.89
SEMA4D-223ENST00000540475 FAT2Q9NYQ8 4349 aa9.5□□□□□ -0.89
SEMA4D-223ENST00000540475 ZNF701M0R085 212 aaPredicted RBP9.5□□□□□ -0.89
SEMA4D-223ENST00000540475 RBMY1A1P0DJD3 496 aaKnown RBP9.5□□□□□ -0.89
SEMA4D-223ENST00000540475 RBMY1CP0DJD4 496 aa9.5□□□□□ -0.89
SEMA4D-223ENST00000540475 NUP62P37198 522 aaPredicted RBP9.5□□□□□ -0.89
SEMA4D-223ENST00000540475 RBMY1FQ15415 496 aaKnown RBP9.5□□□□□ -0.89
SEMA4D-223ENST00000540475 PYDC2Q56P42 97 aa9.5□□□□□ -0.89
SEMA4D-223ENST00000540475 ACTL10Q5JWF8 245 aa9.5□□□□□ -0.89
SEMA4D-223ENST00000540475 SIGLEC15Q6ZMC9 328 aa9.5□□□□□ -0.89
SEMA4D-223ENST00000540475 THAP8Q8NA92 274 aa9.5□□□□□ -0.89
SEMA4D-223ENST00000540475 OR1S1Q8NH92 325 aa9.5□□□□□ -0.89
SEMA4D-223ENST00000540475 IGKV1OR2-108A0A075B7D4 117 aa9.49□□□□□ -0.89
SEMA4D-223ENST00000540475 PRSS46E5RG02 174 aa9.49□□□□□ -0.89
SEMA4D-223ENST00000540475 H3BMM0 161 aa9.49□□□□□ -0.89
SEMA4D-223ENST00000540475 SFT2D2O95562 160 aa9.49□□□□□ -0.89
SEMA4D-223ENST00000540475 IFNA4P05014 189 aa9.49□□□□□ -0.89
SEMA4D-223ENST00000540475 NKX2-1P43699 371 aaPredicted RBP9.49□□□□□ -0.89
SEMA4D-223ENST00000540475 SNRPD3P62318 126 aaKnown RBP9.49□□□□□ -0.89
SEMA4D-223ENST00000540475 ZNF90Q03938 601 aa9.49□□□□□ -0.89
SEMA4D-223ENST00000540475 PSMG4Q5JS54 123 aa9.49□□□□□ -0.89
SEMA4D-223ENST00000540475 C1orf194Q5T5A4 169 aa9.49□□□□□ -0.89
SEMA4D-223ENST00000540475 TMED4Q7Z7H5 227 aa9.49□□□□□ -0.89
SEMA4D-223ENST00000540475 CLUHP3Q96NS8 147 aa9.49□□□□□ -0.89
SEMA4D-223ENST00000540475 TRGV9Q99603 122 aa9.49□□□□□ -0.89
SEMA4D-223ENST00000540475 IGHV4-28A0A0C4DH34 117 aa9.48□□□□□ -0.89
SEMA4D-223ENST00000540475 C11orf94C9JXX5 98 aa9.48□□□□□ -0.89
SEMA4D-223ENST00000540475 SOCS3O14543 225 aa9.48□□□□□ -0.89
SEMA4D-223ENST00000540475 DEFB4AO15263 64 aa9.48□□□□□ -0.89
SEMA4D-223ENST00000540475 MED6O75586 246 aa9.48□□□□□ -0.89
SEMA4D-223ENST00000540475 S100A5P33763 92 aa9.48□□□□□ -0.89
SEMA4D-223ENST00000540475 UBE2MP61081 183 aaKnown RBP9.48□□□□□ -0.89
SEMA4D-223ENST00000540475 RAB11AP62491 216 aa9.48□□□□□ -0.89
SEMA4D-223ENST00000540475 PPP1R1AQ13522 171 aa9.48□□□□□ -0.89
SEMA4D-223ENST00000540475 C2CD4CQ8TF44 421 aa9.48□□□□□ -0.89
SEMA4D-223ENST00000540475 SLC35E1Q96K37 410 aa9.48□□□□□ -0.89
SEMA4D-223ENST00000540475 PFDN2Q9UHV9 154 aa9.48□□□□□ -0.89
SEMA4D-223ENST00000540475 ELOA3CA0A087WX78 387 aaPredicted RBP9.47□□□□□ -0.89
SEMA4D-223ENST00000540475 ZFP92A6NM28 416 aa9.47□□□□□ -0.89
SEMA4D-223ENST00000540475 SNRPGP15A8MWD9 76 aa9.47□□□□□ -0.89
SEMA4D-223ENST00000540475 CFDP00746 253 aaPredicted RBP9.47□□□□□ -0.89
SEMA4D-223ENST00000540475 FABP1P07148 127 aa9.47□□□□□ -0.89
SEMA4D-223ENST00000540475 HLA-DRB4P13762 266 aa9.47□□□□□ -0.89
SEMA4D-223ENST00000540475 CIB3Q96Q77 187 aaPredicted RBP9.47□□□□□ -0.89
SEMA4D-223ENST00000540475 C1QTNF4Q9BXJ3 329 aa9.47□□□□□ -0.89
SEMA4D-223ENST00000540475 SRRQ9GZT4 340 aa9.47□□□□□ -0.89
SEMA4D-223ENST00000540475 FBXL17Q9UF56 701 aa9.47□□□□□ -0.89
SEMA4D-223ENST00000540475 TBC1D24Q9ULP9 559 aa9.47□□□□□ -0.89
SEMA4D-223ENST00000540475 HLA-DRB4X5D2U9 266 aa9.47□□□□□ -0.89
SEMA4D-223ENST00000540475 SYNGR2O43760 224 aa9.46□□□□□ -0.9
SEMA4D-223ENST00000540475 VAMP1P23763 118 aa9.46□□□□□ -0.9
SEMA4D-223ENST00000540475 NUTF2P61970 127 aaKnown RBP9.46□□□□□ -0.9
SEMA4D-223ENST00000540475 ID3Q02535 119 aa9.46□□□□□ -0.9
SEMA4D-223ENST00000540475 CENPSQ8N2Z9 138 aa9.46□□□□□ -0.9
SEMA4D-223ENST00000540475 NEU1Q99519 415 aa9.46□□□□□ -0.9
SEMA4D-223ENST00000540475 WDR12Q9GZL7 423 aaKnown RBP9.46□□□□□ -0.9
SEMA4D-223ENST00000540475 APLNQ9ULZ1 77 aa9.46□□□□□ -0.9
SEMA4D-223ENST00000540475 SLC45A2Q9UMX9 530 aa9.46□□□□□ -0.9
SEMA4D-223ENST00000540475 PSMB3P49720 205 aa9.45□□□□□ -0.9
SEMA4D-223ENST00000540475 RPP30P78346 268 aaKnown RBP9.45□□□□□ -0.9
SEMA4D-223ENST00000540475 GGNBP1Q5YKI7 109 aa9.45□□□□□ -0.9
SEMA4D-223ENST00000540475 ZNF705AQ6ZN79 300 aaPredicted RBP9.45□□□□□ -0.9
SEMA4D-223ENST00000540475 RPP25LQ8N5L8 163 aaKnown RBP9.45□□□□□ -0.9
SEMA4D-223ENST00000540475 SAV1Q9H4B6 383 aaPredicted RBP9.45□□□□□ -0.9
SEMA4D-223ENST00000540475 CLEC5AQ9NY25 188 aa9.45□□□□□ -0.9
SEMA4D-223ENST00000540475 C9orf170A2RU37 121 aa9.44□□□□□ -0.9
SEMA4D-223ENST00000540475 NAP1L6A6NFF2 107 aa9.44□□□□□ -0.9
SEMA4D-223ENST00000540475 NDUFB6O95139 128 aa9.44□□□□□ -0.9
SEMA4D-223ENST00000540475 IAPPP10997 89 aa9.44□□□□□ -0.9
SEMA4D-223ENST00000540475 HLA-DMBP28068 263 aa9.44□□□□□ -0.9
SEMA4D-223ENST00000540475 BAK1Q16611 211 aa9.44□□□□□ -0.9
SEMA4D-223ENST00000540475 SPANXN2Q5MJ10 180 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms