RNA–Protein interactions for RNA: ENST00000540424.5

GABARAPL1-208, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 2

Gene GABARAPL1, Length 2,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-208ENST00000540424 H1FXQ92522 213 aaKnown RBP12.34□□□□□ -0.43
GABARAPL1-208ENST00000540424 MS4A5Q9H3V2 200 aa12.34□□□□□ -0.43
GABARAPL1-208ENST00000540424 GCM1Q9NP62 436 aa12.34□□□□□ -0.43
GABARAPL1-208ENST00000540424 URB1O60287 2271 aaKnown RBP12.34□□□□□ -0.43
GABARAPL1-208ENST00000540424 PROP1O75360 226 aa12.33□□□□□ -0.44
GABARAPL1-208ENST00000540424 FOXH1O75593 365 aa12.33□□□□□ -0.44
GABARAPL1-208ENST00000540424 CGB3P0DN86 165 aa12.33□□□□□ -0.44
GABARAPL1-208ENST00000540424 CGB7P0DN87 165 aa12.33□□□□□ -0.44
GABARAPL1-208ENST00000540424 LINC00205P59089 165 aa12.33□□□□□ -0.44
GABARAPL1-208ENST00000540424 CD300EQ496F6 205 aaPredicted RBP12.33□□□□□ -0.44
GABARAPL1-208ENST00000540424 SPINK9Q5DT21 86 aa12.33□□□□□ -0.44
GABARAPL1-208ENST00000540424 LINC00173Q6ZV60 143 aa12.33□□□□□ -0.44
GABARAPL1-208ENST00000540424 FAM231DQ6ZW35 169 aa12.33□□□□□ -0.44
GABARAPL1-208ENST00000540424 ATP5L2Q7Z4Y8 100 aa12.33□□□□□ -0.44
GABARAPL1-208ENST00000540424 Q8TCH9 128 aa12.33□□□□□ -0.44
GABARAPL1-208ENST00000540424 GRAMD2BQ96HH9 432 aa12.33□□□□□ -0.44
GABARAPL1-208ENST00000540424 HEYLQ9NQ87 328 aaPredicted RBP12.33□□□□□ -0.44
GABARAPL1-208ENST00000540424 THYN1Q9P016 225 aa12.33□□□□□ -0.44
GABARAPL1-208ENST00000540424 SPCS1Q9Y6A9 102 aa12.33□□□□□ -0.44
GABARAPL1-208ENST00000540424 CELSR3Q9NYQ7 3312 aa12.33□□□□□ -0.44
GABARAPL1-208ENST00000540424 INTS1Q8N201 2190 aaKnown RBP12.33□□□□□ -0.44
GABARAPL1-208ENST00000540424 A0A1W2PPM0 123 aa12.33□□□□□ -0.44
GABARAPL1-208ENST00000540424 PRRG2O14669 202 aa12.33□□□□□ -0.44
GABARAPL1-208ENST00000540424 IGHV1-46P01743 117 aa12.33□□□□□ -0.44
GABARAPL1-208ENST00000540424 RPL39P5Q59GN2 51 aa12.33□□□□□ -0.44
GABARAPL1-208ENST00000540424 PLPPR2Q96GM1 343 aa12.33□□□□□ -0.44
GABARAPL1-208ENST00000540424 LSM4Q9Y4Z0 139 aaKnown RBP12.33□□□□□ -0.44
GABARAPL1-208ENST00000540424 SH2D7A6NKC9 451 aaPredicted RBP12.32□□□□□ -0.44
GABARAPL1-208ENST00000540424 PRSS46E5RG02 174 aa12.32□□□□□ -0.44
GABARAPL1-208ENST00000540424 LIPFP07098 398 aa12.32□□□□□ -0.44
GABARAPL1-208ENST00000540424 FAM27E3Q08E93 113 aa12.32□□□□□ -0.44
GABARAPL1-208ENST00000540424 C17orf58Q2M2W7 97 aa12.32□□□□□ -0.44
GABARAPL1-208ENST00000540424 SPRNQ5BIV9 151 aa12.32□□□□□ -0.44
GABARAPL1-208ENST00000540424 NUP35Q8NFH5 326 aa12.32□□□□□ -0.44
GABARAPL1-208ENST00000540424 TMEM140Q9NV12 185 aa12.32□□□□□ -0.44
GABARAPL1-208ENST00000540424 TRAV26-1A0A087WT03 109 aa12.32□□□□□ -0.44
GABARAPL1-208ENST00000540424 CA1P00915 261 aaPredicted RBP12.32□□□□□ -0.44
GABARAPL1-208ENST00000540424 UQCRFS1P47985 274 aa12.32□□□□□ -0.44
GABARAPL1-208ENST00000540424 ZNF134P52741 427 aa12.32□□□□□ -0.44
GABARAPL1-208ENST00000540424 CRYBA4P53673 196 aa12.32□□□□□ -0.44
GABARAPL1-208ENST00000540424 KIR3DS1Q14943 382 aa12.32□□□□□ -0.44
GABARAPL1-208ENST00000540424 FA2HQ7L5A8 372 aa12.32□□□□□ -0.44
GABARAPL1-208ENST00000540424 DDB2Q92466 427 aa12.32□□□□□ -0.44
GABARAPL1-208ENST00000540424 DPF1Q92782 380 aa12.32□□□□□ -0.44
GABARAPL1-208ENST00000540424 TRGV8A0A0C4DH27 118 aa12.31□□□□□ -0.44
GABARAPL1-208ENST00000540424 TEX48A0A1B0GUV7 120 aa12.31□□□□□ -0.44
GABARAPL1-208ENST00000540424 GAGE12HA6NDE8 117 aa12.31□□□□□ -0.44
GABARAPL1-208ENST00000540424 LINC01545Q5VT33 79 aa12.31□□□□□ -0.44
GABARAPL1-208ENST00000540424 NHLRC2Q8NBF2 726 aa12.31□□□□□ -0.44
GABARAPL1-208ENST00000540424 FAM168AQ92567 244 aa12.31□□□□□ -0.44
GABARAPL1-208ENST00000540424 CNOT1A5YKK6 2376 aaKnown RBP12.31□□□□□ -0.44
GABARAPL1-208ENST00000540424 C16orf97H3BN30 126 aa12.31□□□□□ -0.44
GABARAPL1-208ENST00000540424 TNFRSF1AP19438 455 aa12.31□□□□□ -0.44
GABARAPL1-208ENST00000540424 STPG3Q8N7X2 389 aa12.31□□□□□ -0.44
GABARAPL1-208ENST00000540424 PERPQ96FX8 193 aa12.31□□□□□ -0.44
GABARAPL1-208ENST00000540424 SPATA25Q9BR10 227 aa12.31□□□□□ -0.44
GABARAPL1-208ENST00000540424 IDI2-AS1Q9NZ38 188 aa12.31□□□□□ -0.44
GABARAPL1-208ENST00000540424 HSPB8Q9UJY1 196 aa12.31□□□□□ -0.44
GABARAPL1-208ENST00000540424 A0A1B0GXF2 115 aa12.3□□□□□ -0.44
GABARAPL1-208ENST00000540424 VDAC2P45880 294 aaPredicted RBP12.3□□□□□ -0.44
GABARAPL1-208ENST00000540424 RPL24P83731 157 aaKnown RBP12.3□□□□□ -0.44
GABARAPL1-208ENST00000540424 TMEM95Q3KNT9 176 aa12.3□□□□□ -0.44
GABARAPL1-208ENST00000540424 CT45A1Q5HYN5 189 aa12.3□□□□□ -0.44
GABARAPL1-208ENST00000540424 STXBP6Q8NFX7 210 aa12.3□□□□□ -0.44
GABARAPL1-208ENST00000540424 CT45A3Q8NHU0 189 aa12.3□□□□□ -0.44
GABARAPL1-208ENST00000540424 SSMEM1Q8WWF3 244 aa12.3□□□□□ -0.44
GABARAPL1-208ENST00000540424 GAFA1Q96PS6 74 aa12.3□□□□□ -0.44
GABARAPL1-208ENST00000540424 LINC00574Q9H8X3 128 aa12.3□□□□□ -0.44
GABARAPL1-208ENST00000540424 ENY2Q9NPA8 101 aa12.3□□□□□ -0.44
GABARAPL1-208ENST00000540424 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.29□□□□□ -0.44
GABARAPL1-208ENST00000540424 A0A1W2PRE2 83 aa12.29□□□□□ -0.44
GABARAPL1-208ENST00000540424 K7EM74 188 aa12.29□□□□□ -0.44
GABARAPL1-208ENST00000540424 FOXE3Q13461 319 aa12.29□□□□□ -0.44
GABARAPL1-208ENST00000540424 PSG5Q15238 335 aa12.29□□□□□ -0.44
GABARAPL1-208ENST00000540424 TEX36Q5VZQ5 186 aa12.29□□□□□ -0.44
GABARAPL1-208ENST00000540424 ZNF788Q6ZQV5 615 aa12.29□□□□□ -0.44
GABARAPL1-208ENST00000540424 SSBP3Q9BWW4 388 aaPredicted RBP12.29□□□□□ -0.44
GABARAPL1-208ENST00000540424 hADV38S2A0JD32 116 aa12.29□□□□□ -0.44
GABARAPL1-208ENST00000540424 C15orf61A6NNL5 157 aa12.29□□□□□ -0.44
GABARAPL1-208ENST00000540424 IGHV3-7P01780 117 aa12.29□□□□□ -0.44
GABARAPL1-208ENST00000540424 SAA2P0DJI9 122 aaPredicted RBP12.29□□□□□ -0.44
GABARAPL1-208ENST00000540424 FGF6P10767 208 aa12.29□□□□□ -0.44
GABARAPL1-208ENST00000540424 MEF2CQ06413 473 aaPredicted RBP12.29□□□□□ -0.44
GABARAPL1-208ENST00000540424 FAM201AQ5SY85 155 aa12.29□□□□□ -0.44
GABARAPL1-208ENST00000540424 FOXI2Q6ZQN5 318 aa12.29□□□□□ -0.44
GABARAPL1-208ENST00000540424 C1orf159Q96HA4 380 aa12.29□□□□□ -0.44
GABARAPL1-208ENST00000540424 HEATR1Q9H583 2144 aaKnown RBP12.29□□□□□ -0.44
GABARAPL1-208ENST00000540424 TCF19Q9Y242 345 aa12.29□□□□□ -0.44
GABARAPL1-208ENST00000540424 FOXA2Q9Y261 457 aaPredicted RBP12.29□□□□□ -0.44
GABARAPL1-208ENST00000540424 ZNF257Q9Y2Q1 563 aa12.29□□□□□ -0.44
GABARAPL1-208ENST00000540424 TSSC4Q9Y5U2 329 aaPredicted RBP12.29□□□□□ -0.44
GABARAPL1-208ENST00000540424 VSTM5A8MXK1 200 aa12.28□□□□□ -0.44
GABARAPL1-208ENST00000540424 J3QR89 54 aa12.28□□□□□ -0.44
GABARAPL1-208ENST00000540424 FABP2P12104 132 aa12.28□□□□□ -0.44
GABARAPL1-208ENST00000540424 RTL8BQ17RB0 113 aa12.28□□□□□ -0.44
GABARAPL1-208ENST00000540424 CCDC144NLQ6NUI1 221 aa12.28□□□□□ -0.44
GABARAPL1-208ENST00000540424 VKORC1L1Q8N0U8 176 aa12.28□□□□□ -0.44
GABARAPL1-208ENST00000540424 MTURNQ8N3F0 131 aa12.28□□□□□ -0.44
GABARAPL1-208ENST00000540424 DEFB108BQ8NET1 73 aa12.28□□□□□ -0.44
GABARAPL1-208ENST00000540424 ZNF207O43670 478 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms