RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 FXYD7P58549 80 aa8.9□□□□□ -0.98
COPS7A-211ENST00000540408 TAS2R19P59542 299 aa8.9□□□□□ -0.98
COPS7A-211ENST00000540408 OXA1LQ15070 435 aa8.9□□□□□ -0.98
COPS7A-211ENST00000540408 FAM222AQ5U5X8 452 aa8.9□□□□□ -0.98
COPS7A-211ENST00000540408 EBLN2Q6P2I7 272 aa8.9□□□□□ -0.98
COPS7A-211ENST00000540408 FOXI2Q6ZQN5 318 aa8.9□□□□□ -0.98
COPS7A-211ENST00000540408 OR13C8Q8NGS7 320 aa8.9□□□□□ -0.98
COPS7A-211ENST00000540408 MARCH1Q8TCQ1 289 aa8.9□□□□□ -0.98
COPS7A-211ENST00000540408 RBPMSQ93062 196 aaKnown RBP8.9□□□□□ -0.98
COPS7A-211ENST00000540408 CLUHP3Q96NS8 147 aa8.9□□□□□ -0.98
COPS7A-211ENST00000540408 PBDC1Q9BVG4 233 aa8.9□□□□□ -0.98
COPS7A-211ENST00000540408 SAV1Q9H4B6 383 aaPredicted RBP8.9□□□□□ -0.98
COPS7A-211ENST00000540408 MTFP1Q9UDX5 166 aa8.9□□□□□ -0.98
COPS7A-211ENST00000540408 CACNG5Q9UF02 275 aa8.9□□□□□ -0.98
COPS7A-211ENST00000540408 TMED3Q9Y3Q3 217 aa8.9□□□□□ -0.98
COPS7A-211ENST00000540408 MUC4Q99102 2169 aa8.9□□□□□ -0.98
COPS7A-211ENST00000540408 RAB3DO95716 219 aa8.89□□□□□ -0.99
COPS7A-211ENST00000540408 PSG1P11464 419 aa8.89□□□□□ -0.99
COPS7A-211ENST00000540408 PSMB3P49720 205 aa8.89□□□□□ -0.99
COPS7A-211ENST00000540408 GSG1LQ6UXU4 331 aa8.89□□□□□ -0.99
COPS7A-211ENST00000540408 ZNF575Q86XF7 245 aa8.89□□□□□ -0.99
COPS7A-211ENST00000540408 TMEM229BQ8NBD8 167 aa8.89□□□□□ -0.99
COPS7A-211ENST00000540408 OR52I2Q8NH67 350 aa8.89□□□□□ -0.99
COPS7A-211ENST00000540408 GLYATL2Q8WU03 294 aa8.89□□□□□ -0.99
COPS7A-211ENST00000540408 AP3S1Q92572 193 aa8.89□□□□□ -0.99
COPS7A-211ENST00000540408 RNF125Q96EQ8 232 aa8.89□□□□□ -0.99
COPS7A-211ENST00000540408 FABP1P07148 127 aa8.88□□□□□ -0.99
COPS7A-211ENST00000540408 FAM3BP58499 235 aaPredicted RBP8.88□□□□□ -0.99
COPS7A-211ENST00000540408 VBP1P61758 197 aa8.88□□□□□ -0.99
COPS7A-211ENST00000540408 DAD1P61803 113 aa8.88□□□□□ -0.99
COPS7A-211ENST00000540408 NCS1P62166 190 aa8.88□□□□□ -0.99
COPS7A-211ENST00000540408 PSG9Q00887 426 aa8.88□□□□□ -0.99
COPS7A-211ENST00000540408 KLF9Q13886 244 aaPredicted RBP8.88□□□□□ -0.99
COPS7A-211ENST00000540408 RRN3P1Q2M238 152 aa8.88□□□□□ -0.99
COPS7A-211ENST00000540408 GDF5OSQ5U4N7 250 aa8.88□□□□□ -0.99
COPS7A-211ENST00000540408 SAMD13Q5VXD3 122 aa8.88□□□□□ -0.99
COPS7A-211ENST00000540408 TMEM268Q5VZI3 342 aa8.88□□□□□ -0.99
COPS7A-211ENST00000540408 OR8G2PQ6IF36 304 aa8.88□□□□□ -0.99
COPS7A-211ENST00000540408 SELENOHQ8IZQ5 122 aaKnown RBP8.88□□□□□ -0.99
COPS7A-211ENST00000540408 C15orf53Q8NAA6 179 aa8.88□□□□□ -0.99
COPS7A-211ENST00000540408 PPP1R14BQ96C90 147 aa8.88□□□□□ -0.99
COPS7A-211ENST00000540408 GPR146Q96CH1 333 aa8.88□□□□□ -0.99
COPS7A-211ENST00000540408 ATG101Q9BSB4 218 aa8.88□□□□□ -0.99
COPS7A-211ENST00000540408 MAGT1Q9H0U3 335 aa8.88□□□□□ -0.99
COPS7A-211ENST00000540408 NAA60Q9H7X0 242 aa8.88□□□□□ -0.99
COPS7A-211ENST00000540408 U3KQ87 197 aa8.88□□□□□ -0.99
COPS7A-211ENST00000540408 FAT2Q9NYQ8 4349 aa8.87□□□□□ -0.99
COPS7A-211ENST00000540408 LOC102723971A0A1B0GUV8 181 aa8.87□□□□□ -0.99
COPS7A-211ENST00000540408 ZFP92A6NM28 416 aa8.87□□□□□ -0.99
COPS7A-211ENST00000540408 GABARAPH6UMI1 98 aa8.87□□□□□ -0.99
COPS7A-211ENST00000540408 GABARAPO95166 117 aa8.87□□□□□ -0.99
COPS7A-211ENST00000540408 SULT1A3P0DMM9 295 aa8.87□□□□□ -0.99
COPS7A-211ENST00000540408 SULT1A4P0DMN0 295 aa8.87□□□□□ -0.99
COPS7A-211ENST00000540408 MEF2DQ14814 521 aa8.87□□□□□ -0.99
COPS7A-211ENST00000540408 C1orf194Q5T5A4 169 aa8.87□□□□□ -0.99
COPS7A-211ENST00000540408 STEAP1BQ6NZ63 245 aa8.87□□□□□ -0.99
COPS7A-211ENST00000540408 OR4D10Q8NGI6 311 aa8.87□□□□□ -0.99
COPS7A-211ENST00000540408 TMEM208Q9BTX3 173 aa8.87□□□□□ -0.99
COPS7A-211ENST00000540408 FUNDC2Q9BWH2 189 aa8.87□□□□□ -0.99
COPS7A-211ENST00000540408 SLC35B3Q9H1N7 401 aa8.87□□□□□ -0.99
COPS7A-211ENST00000540408 PLA2G2EQ9NZK7 142 aa8.87□□□□□ -0.99
COPS7A-211ENST00000540408 EXTL2Q9UBQ6 330 aa8.87□□□□□ -0.99
COPS7A-211ENST00000540408 KCNIP3Q9Y2W7 256 aa8.87□□□□□ -0.99
COPS7A-211ENST00000540408 YTHDF2Q9Y5A9 579 aaKnown RBP8.87□□□□□ -0.99
COPS7A-211ENST00000540408 DNAH2Q9P225 4427 aa8.87□□□□□ -0.99
COPS7A-211ENST00000540408 SNRPGP15A8MWD9 76 aa8.86□□□□□ -0.99
COPS7A-211ENST00000540408 DISC1C4P0D8 188 aa8.86□□□□□ -0.99
COPS7A-211ENST00000540408 ISLRO14498 428 aa8.86□□□□□ -0.99
COPS7A-211ENST00000540408 NXPH3O95157 252 aa8.86□□□□□ -0.99
COPS7A-211ENST00000540408 ATP5IP56385 69 aaPredicted RBP8.86□□□□□ -0.99
COPS7A-211ENST00000540408 DEFB1P60022 68 aa8.86□□□□□ -0.99
COPS7A-211ENST00000540408 SUPT4H1P63272 117 aaKnown RBP8.86□□□□□ -0.99
COPS7A-211ENST00000540408 SSBP1Q04837 148 aaKnown RBP8.86□□□□□ -0.99
COPS7A-211ENST00000540408 SURF2Q15527 256 aaPredicted RBP8.86□□□□□ -0.99
COPS7A-211ENST00000540408 ZNF79Q15937 498 aa8.86□□□□□ -0.99
COPS7A-211ENST00000540408 NMSQ5H8A3 153 aa8.86□□□□□ -0.99
COPS7A-211ENST00000540408 FAM78BQ5VT40 261 aa8.86□□□□□ -0.99
COPS7A-211ENST00000540408 GPR107Q5VW38 600 aa8.86□□□□□ -0.99
COPS7A-211ENST00000540408 TMEM88Q6PEY1 159 aa8.86□□□□□ -0.99
COPS7A-211ENST00000540408 ZNF709Q8N972 641 aa8.86□□□□□ -0.99
COPS7A-211ENST00000540408 LHFPL5Q8TAF8 219 aa8.86□□□□□ -0.99
COPS7A-211ENST00000540408 SLC35E1Q96K37 410 aa8.86□□□□□ -0.99
COPS7A-211ENST00000540408 RTBDNQ9BSG5 229 aaPredicted RBP8.86□□□□□ -0.99
COPS7A-211ENST00000540408 WDR12Q9GZL7 423 aaKnown RBP8.86□□□□□ -0.99
COPS7A-211ENST00000540408 RPRMQ9NS64 109 aa8.86□□□□□ -0.99
COPS7A-211ENST00000540408 PKHD1P08F94 4074 aa8.85□□□□□ -0.99
COPS7A-211ENST00000540408 C16orf90A8MZG2 172 aa8.85□□□□□ -0.99
COPS7A-211ENST00000540408 MEOX2P50222 304 aa8.85□□□□□ -0.99
COPS7A-211ENST00000540408 PAX9P55771 341 aa8.85□□□□□ -0.99
COPS7A-211ENST00000540408 LYZP61626 148 aa8.85□□□□□ -0.99
COPS7A-211ENST00000540408 OR8I2Q8N0Y5 310 aa8.85□□□□□ -0.99
COPS7A-211ENST00000540408 LGI3Q8N145 548 aa8.85□□□□□ -0.99
COPS7A-211ENST00000540408 DTD1Q8TEA8 209 aa8.85□□□□□ -0.99
COPS7A-211ENST00000540408 TMEM170AQ8WVE7 144 aa8.85□□□□□ -0.99
COPS7A-211ENST00000540408 TMEM56-RWDD3S4R434 201 aa8.85□□□□□ -0.99
COPS7A-211ENST00000540408 DNAH17Q9UFH2 4485 aa8.84□□□□□ -0.99
COPS7A-211ENST00000540408 A0A0J9YX75 114 aa8.84□□□□□ -0.99
COPS7A-211ENST00000540408 CRYM-AS1A6NIL9 109 aa8.84□□□□□ -0.99
COPS7A-211ENST00000540408 ZNF182P17025 639 aaPredicted RBP8.84□□□□□ -0.99
COPS7A-211ENST00000540408 GPX4P36969 197 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms