RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 SCGB2A1O75556 95 aa14.53□□□□□ -0.08
TNFRSF1A-213ENST00000540022 PSG1P11464 419 aa14.53□□□□□ -0.08
TNFRSF1A-213ENST00000540022 OR11H1Q8NG94 326 aa14.53□□□□□ -0.08
TNFRSF1A-213ENST00000540022 STOML3Q8TAV4 291 aa14.53□□□□□ -0.08
TNFRSF1A-213ENST00000540022 SH3BGRL3Q9H299 93 aa14.53□□□□□ -0.08
TNFRSF1A-213ENST00000540022 TOMM40O96008 361 aa14.52□□□□□ -0.08
TNFRSF1A-213ENST00000540022 LINC00869P0C866 280 aa14.52□□□□□ -0.08
TNFRSF1A-213ENST00000540022 RD3LP0DJH9 198 aa14.52□□□□□ -0.08
TNFRSF1A-213ENST00000540022 TPT1P13693 172 aaKnown RBP14.52□□□□□ -0.08
TNFRSF1A-213ENST00000540022 ZNF616Q08AN1 781 aa14.52□□□□□ -0.08
TNFRSF1A-213ENST00000540022 ZNF600Q6ZNG1 722 aa14.52□□□□□ -0.08
TNFRSF1A-213ENST00000540022 BAP18Q8IXM2 172 aa14.52□□□□□ -0.08
TNFRSF1A-213ENST00000540022 BPIFCQ8NFQ6 507 aa14.52□□□□□ -0.08
TNFRSF1A-213ENST00000540022 RPL29P47914 159 aaKnown RBP14.51□□□□□ -0.09
TNFRSF1A-213ENST00000540022 SELENOTP62341 195 aa14.51□□□□□ -0.09
TNFRSF1A-213ENST00000540022 EIF5AP63241 154 aaKnown RBP14.51□□□□□ -0.09
TNFRSF1A-213ENST00000540022 PRR20EP86478 221 aa14.51□□□□□ -0.09
TNFRSF1A-213ENST00000540022 PRR20CP86479 221 aa14.51□□□□□ -0.09
TNFRSF1A-213ENST00000540022 PRR20DP86480 221 aa14.51□□□□□ -0.09
TNFRSF1A-213ENST00000540022 PRR20BP86481 221 aa14.51□□□□□ -0.09
TNFRSF1A-213ENST00000540022 PRR20AP86496 221 aa14.51□□□□□ -0.09
TNFRSF1A-213ENST00000540022 STPG3Q8N7X2 389 aa14.51□□□□□ -0.09
TNFRSF1A-213ENST00000540022 ZNF709Q8N972 641 aa14.51□□□□□ -0.09
TNFRSF1A-213ENST00000540022 OR1N2Q8NGR9 330 aa14.51□□□□□ -0.09
TNFRSF1A-213ENST00000540022 ST8SIA2Q92186 375 aa14.51□□□□□ -0.09
TNFRSF1A-213ENST00000540022 RAX2Q96IS3 184 aa14.51□□□□□ -0.09
TNFRSF1A-213ENST00000540022 PUS1Q9Y606 427 aaKnown RBP eCLIP14.51□□□□□ -0.09
TNFRSF1A-213ENST00000540022 PXMP4Q9Y6I8 212 aa14.51□□□□□ -0.09
TNFRSF1A-213ENST00000540022 C17orf112F2Z3M2 114 aa14.51□□□□□ -0.09
TNFRSF1A-213ENST00000540022 LINC01619G3V211 115 aa14.51□□□□□ -0.09
TNFRSF1A-213ENST00000540022 FABP1P07148 127 aa14.51□□□□□ -0.09
TNFRSF1A-213ENST00000540022 RELQ04864 619 aaPredicted RBP14.51□□□□□ -0.09
TNFRSF1A-213ENST00000540022 Q8WTZ3 238 aa14.51□□□□□ -0.09
TNFRSF1A-213ENST00000540022 GNPNAT1Q96EK6 184 aaPredicted RBP14.51□□□□□ -0.09
TNFRSF1A-213ENST00000540022 SLC25A32Q9H2D1 315 aa14.51□□□□□ -0.09
TNFRSF1A-213ENST00000540022 TIMM9Q9Y5J7 89 aa14.51□□□□□ -0.09
TNFRSF1A-213ENST00000540022 HOXD3P31249 432 aaPredicted RBP14.5□□□□□ -0.09
TNFRSF1A-213ENST00000540022 B2MP61769 119 aa14.5□□□□□ -0.09
TNFRSF1A-213ENST00000540022 RPEL1Q2QD12 228 aa14.5□□□□□ -0.09
TNFRSF1A-213ENST00000540022 TOMM20LQ6UXN7 152 aa14.5□□□□□ -0.09
TNFRSF1A-213ENST00000540022 OR51G1Q8NGK1 321 aa14.5□□□□□ -0.09
TNFRSF1A-213ENST00000540022 DPF1Q92782 380 aa14.5□□□□□ -0.09
TNFRSF1A-213ENST00000540022 RCC1LQ96I51 464 aaKnown RBP14.5□□□□□ -0.09
TNFRSF1A-213ENST00000540022 PSMG3Q9BT73 122 aaPredicted RBP14.5□□□□□ -0.09
TNFRSF1A-213ENST00000540022 SLC39A9Q9NUM3 307 aa14.5□□□□□ -0.09
TNFRSF1A-213ENST00000540022 IGHV3OR16-8A0A075B7F1 116 aa14.49□□□□□ -0.09
TNFRSF1A-213ENST00000540022 CCL24O00175 119 aa14.49□□□□□ -0.09
TNFRSF1A-213ENST00000540022 YIF1AO95070 293 aa14.49□□□□□ -0.09
TNFRSF1A-213ENST00000540022 SPP1P10451 314 aa14.49□□□□□ -0.09
TNFRSF1A-213ENST00000540022 SLURP1P55000 103 aa14.49□□□□□ -0.09
TNFRSF1A-213ENST00000540022 UNQ9165/PRO28630Q6UXU0 137 aa14.49□□□□□ -0.09
TNFRSF1A-213ENST00000540022 ZFAND3Q9H8U3 227 aa14.49□□□□□ -0.09
TNFRSF1A-213ENST00000540022 WI2-2373I1.2A0A1W2PRP0 233 aa14.48□□□□□ -0.09
TNFRSF1A-213ENST00000540022 NDUFA4O00483 81 aa14.48□□□□□ -0.09
TNFRSF1A-213ENST00000540022 TSPAN15O95858 294 aa14.48□□□□□ -0.09
TNFRSF1A-213ENST00000540022 CFDP00746 253 aaPredicted RBP14.48□□□□□ -0.09
TNFRSF1A-213ENST00000540022 IL4P05112 153 aa14.48□□□□□ -0.09
TNFRSF1A-213ENST00000540022 ZP3P21754 424 aa14.48□□□□□ -0.09
TNFRSF1A-213ENST00000540022 FHL3Q13643 280 aa14.48□□□□□ -0.09
TNFRSF1A-213ENST00000540022 GPHB5Q86YW7 130 aa14.48□□□□□ -0.09
TNFRSF1A-213ENST00000540022 OR2G3Q8NGZ4 309 aa14.48□□□□□ -0.09
TNFRSF1A-213ENST00000540022 KCNIP2Q9NS61 270 aa14.48□□□□□ -0.09
TNFRSF1A-213ENST00000540022 SEC11BP0C7V7 166 aa14.47□□□□□ -0.09
TNFRSF1A-213ENST00000540022 ELLP55199 621 aaPredicted RBP14.47□□□□□ -0.09
TNFRSF1A-213ENST00000540022 LYZP61626 148 aa14.47□□□□□ -0.09
TNFRSF1A-213ENST00000540022 USF2Q15853 346 aaPredicted RBP14.47□□□□□ -0.09
TNFRSF1A-213ENST00000540022 GCSAMLQ5JQS6 135 aa14.47□□□□□ -0.09
TNFRSF1A-213ENST00000540022 FFAR4Q5NUL3 377 aa14.47□□□□□ -0.09
TNFRSF1A-213ENST00000540022 TMED6Q8WW62 240 aa14.47□□□□□ -0.09
TNFRSF1A-213ENST00000540022 RNF125Q96EQ8 232 aa14.47□□□□□ -0.09
TNFRSF1A-213ENST00000540022 PLA2G2EQ9NZK7 142 aa14.47□□□□□ -0.09
TNFRSF1A-213ENST00000540022 DOK5Q9P104 306 aa14.47□□□□□ -0.09
TNFRSF1A-213ENST00000540022 PLP1P60201 277 aa14.46□□□□□ -0.09
TNFRSF1A-213ENST00000540022 KLF5Q13887 457 aaPredicted RBP14.46□□□□□ -0.09
TNFRSF1A-213ENST00000540022 FAM106AQ4KMX7 169 aa14.46□□□□□ -0.09
TNFRSF1A-213ENST00000540022 PRR31Q5SQ13 230 aa14.46□□□□□ -0.09
TNFRSF1A-213ENST00000540022 Q6ZRG5 221 aa14.46□□□□□ -0.09
TNFRSF1A-213ENST00000540022 TMEM190Q8WZ59 177 aa14.46□□□□□ -0.09
TNFRSF1A-213ENST00000540022 PBDC1Q9BVG4 233 aa14.46□□□□□ -0.09
TNFRSF1A-213ENST00000540022 VSIRQ9H7M9 311 aa14.46□□□□□ -0.09
TNFRSF1A-213ENST00000540022 ZNF320A2RRD8 509 aa14.46□□□□□ -0.1
TNFRSF1A-213ENST00000540022 ORM2P19652 201 aa14.46□□□□□ -0.1
TNFRSF1A-213ENST00000540022 SYNJ2BPP57105 145 aa14.46□□□□□ -0.1
TNFRSF1A-213ENST00000540022 SERF2P84101 59 aa14.46□□□□□ -0.1
TNFRSF1A-213ENST00000540022 PATE2Q6UY27 113 aa14.46□□□□□ -0.1
TNFRSF1A-213ENST00000540022 OR1B1Q8NGR6 318 aa14.46□□□□□ -0.1
TNFRSF1A-213ENST00000540022 C20orf24Q9BUV8 137 aa14.46□□□□□ -0.1
TNFRSF1A-213ENST00000540022 MYCNOSP40205 109 aa14.45□□□□□ -0.1
TNFRSF1A-213ENST00000540022 C1QL4Q86Z23 238 aa14.45□□□□□ -0.1
TNFRSF1A-213ENST00000540022 TMEM37Q8WXS4 190 aa14.45□□□□□ -0.1
TNFRSF1A-213ENST00000540022 DLX4Q92988 240 aaPredicted RBP14.45□□□□□ -0.1
TNFRSF1A-213ENST00000540022 VWFP04275 2813 aa14.44□□□□□ -0.1
TNFRSF1A-213ENST00000540022 ZNF207O43670 478 aaKnown RBP14.44□□□□□ -0.1
TNFRSF1A-213ENST00000540022 OR5G3P0C626 314 aa14.44□□□□□ -0.1
TNFRSF1A-213ENST00000540022 ALKAL2Q6UX46 152 aa14.44□□□□□ -0.1
TNFRSF1A-213ENST00000540022 MRPL27Q9P0M9 148 aaKnown RBP14.44□□□□□ -0.1
TNFRSF1A-213ENST00000540022 LGALS9O00182 355 aa14.43□□□□□ -0.1
TNFRSF1A-213ENST00000540022 HYPMO75409 117 aa14.43□□□□□ -0.1
TNFRSF1A-213ENST00000540022 RAB2AP61019 212 aa14.43□□□□□ -0.1
TNFRSF1A-213ENST00000540022 PXDC1Q5TGL8 231 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms