RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 C20orf144Q9BQM9 153 aa13.42□□□□□ -0.26
COPS3-212ENST00000539941 F8P00451 2351 aa13.42□□□□□ -0.26
COPS3-212ENST00000539941 PLXNB1O43157 2135 aa13.41□□□□□ -0.26
COPS3-212ENST00000539941 LOC102723971A0A1B0GUV8 181 aa13.41□□□□□ -0.26
COPS3-212ENST00000539941 NCBP2LA6PVI3 153 aaKnown RBP13.41□□□□□ -0.26
COPS3-212ENST00000539941 CORTO00230 105 aa13.41□□□□□ -0.26
COPS3-212ENST00000539941 NPSP0C0P6 89 aa13.41□□□□□ -0.26
COPS3-212ENST00000539941 IGHV4-38-2P0DP08 117 aa13.41□□□□□ -0.26
COPS3-212ENST00000539941 BPIFB3P59826 476 aa13.41□□□□□ -0.26
COPS3-212ENST00000539941 FBLN7Q53RD9 439 aa13.41□□□□□ -0.26
COPS3-212ENST00000539941 TMEM144Q7Z5S9 345 aa13.41□□□□□ -0.26
COPS3-212ENST00000539941 KRTAP1-3Q8IUG1 177 aa13.41□□□□□ -0.26
COPS3-212ENST00000539941 RPRMQ9NS64 109 aa13.41□□□□□ -0.26
COPS3-212ENST00000539941 OPRK1P41145 380 aa13.4□□□□□ -0.26
COPS3-212ENST00000539941 FXYD3Q14802 87 aa13.4□□□□□ -0.26
COPS3-212ENST00000539941 COL5A1-AS1Q5SY13 56 aa13.4□□□□□ -0.26
COPS3-212ENST00000539941 FAM120AOSQ5T036 256 aa13.4□□□□□ -0.26
COPS3-212ENST00000539941 C22orf15Q8WYQ4 148 aa13.4□□□□□ -0.26
COPS3-212ENST00000539941 SLC35E1Q96K37 410 aa13.4□□□□□ -0.26
COPS3-212ENST00000539941 Q96MF0 132 aa13.4□□□□□ -0.26
COPS3-212ENST00000539941 IGHV3OR16-10A0A075B7F0 116 aa13.4□□□□□ -0.26
COPS3-212ENST00000539941 HLA-DRB1P01911 266 aa13.4□□□□□ -0.26
COPS3-212ENST00000539941 IGHV4-31P0DP07 118 aa13.4□□□□□ -0.26
COPS3-212ENST00000539941 AREGP15514 252 aa13.4□□□□□ -0.26
COPS3-212ENST00000539941 TMEM249Q2WGJ8 235 aa13.4□□□□□ -0.26
COPS3-212ENST00000539941 FFAR4Q5NUL3 377 aa13.4□□□□□ -0.26
COPS3-212ENST00000539941 ETFRF1Q6IPR1 90 aa13.4□□□□□ -0.26
COPS3-212ENST00000539941 BRD3OSQ6XYD6 125 aa13.4□□□□□ -0.26
COPS3-212ENST00000539941 Q8N9W7 124 aa13.4□□□□□ -0.26
COPS3-212ENST00000539941 OR1L6Q8NGR2 347 aa13.4□□□□□ -0.26
COPS3-212ENST00000539941 SSMEM1Q8WWF3 244 aa13.4□□□□□ -0.26
COPS3-212ENST00000539941 MGST2Q99735 147 aa13.4□□□□□ -0.26
COPS3-212ENST00000539941 MIEN1Q9BRT3 115 aa13.4□□□□□ -0.26
COPS3-212ENST00000539941 GGTLC1Q9BX51 225 aa13.4□□□□□ -0.26
COPS3-212ENST00000539941 ZFP30Q9Y2G7 519 aa13.4□□□□□ -0.26
COPS3-212ENST00000539941 F11RQ9Y624 299 aaKnown RBP13.4□□□□□ -0.26
COPS3-212ENST00000539941 TGFAP01135 160 aa13.39□□□□□ -0.27
COPS3-212ENST00000539941 ELLP55199 621 aaPredicted RBP13.39□□□□□ -0.27
COPS3-212ENST00000539941 ACSM6Q6P461 480 aa13.39□□□□□ -0.27
COPS3-212ENST00000539941 MBD3L1Q8WWY6 194 aa13.39□□□□□ -0.27
COPS3-212ENST00000539941 OR5B12Q96R08 314 aa13.39□□□□□ -0.27
COPS3-212ENST00000539941 SDF2L1Q9HCN8 221 aa13.39□□□□□ -0.27
COPS3-212ENST00000539941 NAGKQ9UJ70 344 aa13.39□□□□□ -0.27
COPS3-212ENST00000539941 VPS13CQ709C8 3753 aa13.39□□□□□ -0.27
COPS3-212ENST00000539941 ZNF469Q96JG9 3925 aaPredicted RBP13.38□□□□□ -0.27
COPS3-212ENST00000539941 PRRC2AP48634 2157 aaKnown RBP13.38□□□□□ -0.27
COPS3-212ENST00000539941 A0A0U1RQK1 487 aa13.38□□□□□ -0.27
COPS3-212ENST00000539941 REG1AP05451 166 aa13.38□□□□□ -0.27
COPS3-212ENST00000539941 CX3CL1P78423 397 aa13.38□□□□□ -0.27
COPS3-212ENST00000539941 KLF17Q5JT82 389 aaPredicted RBP13.38□□□□□ -0.27
COPS3-212ENST00000539941 ARPC1AQ92747 370 aa13.38□□□□□ -0.27
COPS3-212ENST00000539941 GSX1Q9H4S2 264 aaPredicted RBP13.38□□□□□ -0.27
COPS3-212ENST00000539941 VSIRQ9H7M9 311 aa13.38□□□□□ -0.27
COPS3-212ENST00000539941 NAV3Q8IVL0 2385 aa13.38□□□□□ -0.27
COPS3-212ENST00000539941 AVPP01185 164 aa13.37□□□□□ -0.27
COPS3-212ENST00000539941 IFNA1P01562 189 aa13.37□□□□□ -0.27
COPS3-212ENST00000539941 CDKN1BP46527 198 aa13.37□□□□□ -0.27
COPS3-212ENST00000539941 RPL29P47914 159 aaKnown RBP13.37□□□□□ -0.27
COPS3-212ENST00000539941 CEBPGP53567 150 aa13.37□□□□□ -0.27
COPS3-212ENST00000539941 CCL20P78556 96 aa13.37□□□□□ -0.27
COPS3-212ENST00000539941 PMS2P11Q13670 270 aa13.37□□□□□ -0.27
COPS3-212ENST00000539941 RASL11BQ9BPW5 248 aa13.37□□□□□ -0.27
COPS3-212ENST00000539941 ITPR3Q14573 2671 aa13.37□□□□□ -0.27
COPS3-212ENST00000539941 CR1P17927 2039 aa13.37□□□□□ -0.27
COPS3-212ENST00000539941 CRYGCP07315 174 aa13.37□□□□□ -0.27
COPS3-212ENST00000539941 TEX38Q6PEX7 206 aa13.37□□□□□ -0.27
COPS3-212ENST00000539941 GBGT1Q8N5D6 347 aa13.37□□□□□ -0.27
COPS3-212ENST00000539941 OR10G9Q8NGN4 311 aa13.37□□□□□ -0.27
COPS3-212ENST00000539941 OR10G7Q8NGN6 311 aa13.37□□□□□ -0.27
COPS3-212ENST00000539941 FNDC4Q9H6D8 234 aaPredicted RBP13.37□□□□□ -0.27
COPS3-212ENST00000539941 PXMP4Q9Y6I8 212 aa13.37□□□□□ -0.27
COPS3-212ENST00000539941 SCGB1D1O95968 90 aa13.36□□□□□ -0.27
COPS3-212ENST00000539941 TYMSP04818 313 aa13.36□□□□□ -0.27
COPS3-212ENST00000539941 MFAP2P55001 183 aa13.36□□□□□ -0.27
COPS3-212ENST00000539941 DMRTA1Q5VZB9 504 aa13.36□□□□□ -0.27
COPS3-212ENST00000539941 FAM90A2PQ658T7 463 aa13.36□□□□□ -0.27
COPS3-212ENST00000539941 SSX7Q7RTT5 188 aa13.36□□□□□ -0.27
COPS3-212ENST00000539941 RPP25LQ8N5L8 163 aaKnown RBP13.36□□□□□ -0.27
COPS3-212ENST00000539941 MAPK1IP1LQ8NDC0 245 aa13.36□□□□□ -0.27
COPS3-212ENST00000539941 MOB4Q9Y3A3 225 aa13.36□□□□□ -0.27
COPS3-212ENST00000539941 IGHV7-81A0A0B4J1V7 117 aa13.35□□□□□ -0.27
COPS3-212ENST00000539941 CTXND1A0A1B0GTU2 59 aa13.35□□□□□ -0.27
COPS3-212ENST00000539941 NPIPB5A8MRT5 1133 aa13.35□□□□□ -0.27
COPS3-212ENST00000539941 PFN1P07737 140 aaKnown RBP13.35□□□□□ -0.27
COPS3-212ENST00000539941 ZNF726P1Q15940 193 aa13.35□□□□□ -0.27
COPS3-212ENST00000539941 ZNF705AQ6ZN79 300 aaPredicted RBP13.35□□□□□ -0.27
COPS3-212ENST00000539941 PIFOQ8TCI5 191 aa13.35□□□□□ -0.27
COPS3-212ENST00000539941 NAT8Q9UHE5 227 aa13.35□□□□□ -0.27
COPS3-212ENST00000539941 SLC45A2Q9UMX9 530 aa13.35□□□□□ -0.27
COPS3-212ENST00000539941 APELAP0DMC3 54 aa13.34□□□□□ -0.27
COPS3-212ENST00000539941 BCL2P10415 239 aa13.34□□□□□ -0.27
COPS3-212ENST00000539941 SRP14P37108 136 aaKnown RBP13.34□□□□□ -0.27
COPS3-212ENST00000539941 PRR20EP86478 221 aa13.34□□□□□ -0.27
COPS3-212ENST00000539941 PRR20CP86479 221 aa13.34□□□□□ -0.27
COPS3-212ENST00000539941 PRR20DP86480 221 aa13.34□□□□□ -0.27
COPS3-212ENST00000539941 PRR20BP86481 221 aa13.34□□□□□ -0.27
COPS3-212ENST00000539941 PRR20AP86496 221 aa13.34□□□□□ -0.27
COPS3-212ENST00000539941 MLANAQ16655 118 aa13.34□□□□□ -0.27
COPS3-212ENST00000539941 TMEM183BQ1AE95 376 aa13.34□□□□□ -0.27
COPS3-212ENST00000539941 ACTL10Q5JWF8 245 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms