RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 RPP25LQ8N5L8 163 aaKnown RBP12.51□□□□□ -0.41
TRAF3-204ENST00000539721 OR51G1Q8NGK1 321 aa12.51□□□□□ -0.41
TRAF3-204ENST00000539721 Q8WTZ3 238 aa12.51□□□□□ -0.41
TRAF3-204ENST00000539721 ANKRD34BA5PLL1 514 aa12.5□□□□□ -0.41
TRAF3-204ENST00000539721 PPP5D1E7EU14 171 aa12.5□□□□□ -0.41
TRAF3-204ENST00000539721 COX7A2P2O60397 106 aa12.5□□□□□ -0.41
TRAF3-204ENST00000539721 ARL3P36405 182 aa12.5□□□□□ -0.41
TRAF3-204ENST00000539721 LYZP61626 148 aa12.5□□□□□ -0.41
TRAF3-204ENST00000539721 PXDC1Q5TGL8 231 aa12.5□□□□□ -0.41
TRAF3-204ENST00000539721 OR1L4Q8NGR5 311 aa12.5□□□□□ -0.41
TRAF3-204ENST00000539721 MYOZ3Q8TDC0 251 aa12.5□□□□□ -0.41
TRAF3-204ENST00000539721 RCC1LQ96I51 464 aaKnown RBP12.5□□□□□ -0.41
TRAF3-204ENST00000539721 OR5B12Q96R08 314 aa12.5□□□□□ -0.41
TRAF3-204ENST00000539721 ACTR3CQ9C0K3 210 aaPredicted RBP12.5□□□□□ -0.41
TRAF3-204ENST00000539721 SLC25A22Q9H936 323 aa12.5□□□□□ -0.41
TRAF3-204ENST00000539721 A0A1W2PPV4 95 aa12.49□□□□□ -0.41
TRAF3-204ENST00000539721 H2AFB1P0C5Y9 115 aa12.49□□□□□ -0.41
TRAF3-204ENST00000539721 ORM2P19652 201 aa12.49□□□□□ -0.41
TRAF3-204ENST00000539721 CDC34P49427 236 aaPredicted RBP12.49□□□□□ -0.41
TRAF3-204ENST00000539721 ZNF726P1Q15940 193 aa12.49□□□□□ -0.41
TRAF3-204ENST00000539721 ZNF600Q6ZNG1 722 aa12.49□□□□□ -0.41
TRAF3-204ENST00000539721 OR1B1Q8NGR6 318 aa12.49□□□□□ -0.41
TRAF3-204ENST00000539721 PFDN5Q99471 154 aa12.49□□□□□ -0.41
TRAF3-204ENST00000539721 IGHV3-35A0A0C4DH35 117 aa12.48□□□□□ -0.41
TRAF3-204ENST00000539721 CTXND1A0A1B0GTU2 59 aa12.48□□□□□ -0.41
TRAF3-204ENST00000539721 TRBV12-3P01733 135 aa12.48□□□□□ -0.41
TRAF3-204ENST00000539721 IL4P05112 153 aa12.48□□□□□ -0.41
TRAF3-204ENST00000539721 OR5G3P0C626 314 aa12.48□□□□□ -0.41
TRAF3-204ENST00000539721 RHOBP62745 196 aa12.48□□□□□ -0.41
TRAF3-204ENST00000539721 FAM209BQ5JX69 171 aa12.48□□□□□ -0.41
TRAF3-204ENST00000539721 SSX7Q7RTT5 188 aa12.48□□□□□ -0.41
TRAF3-204ENST00000539721 WIPF2Q8TF74 440 aaPredicted RBP12.48□□□□□ -0.41
TRAF3-204ENST00000539721 TMEM37Q8WXS4 190 aa12.48□□□□□ -0.41
TRAF3-204ENST00000539721 UBE2E2Q96LR5 201 aa12.48□□□□□ -0.41
TRAF3-204ENST00000539721 PBDC1Q9BVG4 233 aa12.48□□□□□ -0.41
TRAF3-204ENST00000539721 C19orf24Q9BVV8 132 aa12.48□□□□□ -0.41
TRAF3-204ENST00000539721 DNAJC4Q9NNZ3 241 aa12.48□□□□□ -0.41
TRAF3-204ENST00000539721 RNF114Q9Y508 228 aa12.48□□□□□ -0.41
TRAF3-204ENST00000539721 NF1P21359 2839 aa12.48□□□□□ -0.41
TRAF3-204ENST00000539721 CLPSL1A2RUU4 121 aa12.48□□□□□ -0.41
TRAF3-204ENST00000539721 SEC14L6B5MCN3 397 aa12.48□□□□□ -0.41
TRAF3-204ENST00000539721 HAX1O00165 279 aa12.48□□□□□ -0.41
TRAF3-204ENST00000539721 HYPMO75409 117 aa12.48□□□□□ -0.41
TRAF3-204ENST00000539721 EIF3GO75821 320 aaKnown RBP eCLIP12.48□□□□□ -0.41
TRAF3-204ENST00000539721 PLP1P60201 277 aa12.48□□□□□ -0.41
TRAF3-204ENST00000539721 RELQ04864 619 aaPredicted RBP12.48□□□□□ -0.41
TRAF3-204ENST00000539721 FAM78BQ5VT40 261 aa12.48□□□□□ -0.41
TRAF3-204ENST00000539721 C10orf113Q5VZT2 155 aa12.48□□□□□ -0.41
TRAF3-204ENST00000539721 LCN15Q6UWW0 184 aa12.48□□□□□ -0.41
TRAF3-204ENST00000539721 PATE2Q6UY27 113 aa12.48□□□□□ -0.41
TRAF3-204ENST00000539721 GATAD1Q8WUU5 269 aa12.48□□□□□ -0.41
TRAF3-204ENST00000539721 SFT2D1Q8WV19 159 aa12.48□□□□□ -0.41
TRAF3-204ENST00000539721 RAB24Q969Q5 203 aa12.48□□□□□ -0.41
TRAF3-204ENST00000539721 RNF125Q96EQ8 232 aa12.48□□□□□ -0.41
TRAF3-204ENST00000539721 HRH4Q9H3N8 390 aa12.48□□□□□ -0.41
TRAF3-204ENST00000539721 PEF1Q9UBV8 284 aaKnown RBP12.48□□□□□ -0.41
TRAF3-204ENST00000539721 PUS1Q9Y606 427 aaKnown RBP eCLIP12.48□□□□□ -0.41
TRAF3-204ENST00000539721 ELOA3CA0A087WX78 387 aaPredicted RBP12.47□□□□□ -0.41
TRAF3-204ENST00000539721 A0A1B0GV50 99 aa12.47□□□□□ -0.41
TRAF3-204ENST00000539721 WI2-2373I1.2A0A1W2PRP0 233 aa12.47□□□□□ -0.41
TRAF3-204ENST00000539721 OR2C1O95371 312 aa12.47□□□□□ -0.41
TRAF3-204ENST00000539721 TCTEX1D4Q5JR98 221 aa12.47□□□□□ -0.41
TRAF3-204ENST00000539721 KHDC1LQ5JSQ8 128 aa12.47□□□□□ -0.41
TRAF3-204ENST00000539721 SPATA31B1PQ5VZV4 182 aa12.47□□□□□ -0.41
TRAF3-204ENST00000539721 RNF2Q99496 336 aa12.47□□□□□ -0.41
TRAF3-204ENST00000539721 SEPSECSQ9HD40 501 aaKnown RBP12.47□□□□□ -0.41
TRAF3-204ENST00000539721 FUT9Q9Y231 359 aa12.47□□□□□ -0.41
TRAF3-204ENST00000539721 MAP1LC3B2A6NCE7 125 aa12.46□□□□□ -0.41
TRAF3-204ENST00000539721 HMGB3O15347 200 aaKnown RBP12.46□□□□□ -0.41
TRAF3-204ENST00000539721 LGALS1P09382 135 aaKnown RBP12.46□□□□□ -0.41
TRAF3-204ENST00000539721 MBD3L1Q8WWY6 194 aa12.46□□□□□ -0.41
TRAF3-204ENST00000539721 MRPL32Q9BYC8 188 aaKnown RBP12.46□□□□□ -0.41
TRAF3-204ENST00000539721 MAP1LC3BQ9GZQ8 125 aa12.46□□□□□ -0.41
TRAF3-204ENST00000539721 HIGD1AQ9Y241 93 aa12.46□□□□□ -0.41
TRAF3-204ENST00000539721 HBE1P02100 147 aa12.46□□□□□ -0.42
TRAF3-204ENST00000539721 MIR17HGQ75NE6 70 aa12.46□□□□□ -0.42
TRAF3-204ENST00000539721 ZNF414Q96IQ9 312 aa12.46□□□□□ -0.42
TRAF3-204ENST00000539721 UHRF2Q96PU4 802 aa12.46□□□□□ -0.42
TRAF3-204ENST00000539721 MAST4O15021 2626 aa12.45□□□□□ -0.42
TRAF3-204ENST00000539721 TEX46H3BTG2 121 aa12.45□□□□□ -0.42
TRAF3-204ENST00000539721 BMPR1BO00238 502 aa12.45□□□□□ -0.42
TRAF3-204ENST00000539721 GGCTO75223 188 aaKnown RBP12.45□□□□□ -0.42
TRAF3-204ENST00000539721 CDX1P47902 265 aaPredicted RBP12.45□□□□□ -0.42
TRAF3-204ENST00000539721 FGF8P55075 233 aaPredicted RBP12.45□□□□□ -0.42
TRAF3-204ENST00000539721 PROK1P58294 105 aa12.45□□□□□ -0.42
TRAF3-204ENST00000539721 USF2Q15853 346 aaPredicted RBP12.45□□□□□ -0.42
TRAF3-204ENST00000539721 TOMM20LQ6UXN7 152 aa12.45□□□□□ -0.42
TRAF3-204ENST00000539721 LINC00305Q7Z4B0 112 aa12.45□□□□□ -0.42
TRAF3-204ENST00000539721 PFDN2Q9UHV9 154 aa12.45□□□□□ -0.42
TRAF3-204ENST00000539721 CD28P10747 220 aa12.44□□□□□ -0.42
TRAF3-204ENST00000539721 C11orf44Q8N8P7 122 aa12.44□□□□□ -0.42
TRAF3-204ENST00000539721 LYPD6BQ8NI32 183 aa12.44□□□□□ -0.42
TRAF3-204ENST00000539721 ZFAND3Q9H8U3 227 aa12.44□□□□□ -0.42
TRAF3-204ENST00000539721 MRPL27Q9P0M9 148 aaKnown RBP12.44□□□□□ -0.42
TRAF3-204ENST00000539721 IGHV3OR16-8A0A075B7F1 116 aa12.43□□□□□ -0.42
TRAF3-204ENST00000539721 LINC00862A6NCI5 91 aa12.43□□□□□ -0.42
TRAF3-204ENST00000539721 STAG3L2P0CL84 134 aa12.43□□□□□ -0.42
TRAF3-204ENST00000539721 STAG3L3P0CL85 134 aa12.43□□□□□ -0.42
TRAF3-204ENST00000539721 C18orf65Q6ZTR6 163 aa12.43□□□□□ -0.42
TRAF3-204ENST00000539721 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms