RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 CRPP02741 224 aa2.22□□□□□ -2.05
TRAV11-201ENST00000539512 PPBPP02775 128 aa2.22□□□□□ -2.05
TRAV11-201ENST00000539512 ZNF705DP0CH99 300 aaPredicted RBP2.22□□□□□ -2.05
TRAV11-201ENST00000539512 ZNF705BP0CI00 300 aaPredicted RBP2.22□□□□□ -2.05
TRAV11-201ENST00000539512 ARL14EPLP0DKL9 152 aa2.22□□□□□ -2.05
TRAV11-201ENST00000539512 UBE2IP63279 158 aaKnown RBP2.22□□□□□ -2.05
TRAV11-201ENST00000539512 PTRHD1Q6GMV3 140 aaKnown RBP2.22□□□□□ -2.05
TRAV11-201ENST00000539512 LOC285556D6RIA3 1793 aa2.22□□□□□ -2.05
TRAV11-201ENST00000539512 CENPEQ02224 2701 aa2.22□□□□□ -2.05
TRAV11-201ENST00000539512 ITPR2Q14571 2701 aa2.22□□□□□ -2.05
TRAV11-201ENST00000539512 SORL1Q92673 2214 aa2.22□□□□□ -2.05
TRAV11-201ENST00000539512 ARAP2Q8WZ64 1704 aa2.22□□□□□ -2.05
TRAV11-201ENST00000539512 MGAQ8IWI9 3026 aa2.22□□□□□ -2.05
TRAV11-201ENST00000539512 SIP14410 1827 aa2.21□□□□□ -2.05
TRAV11-201ENST00000539512 PHIPQ8WWQ0 1821 aa2.21□□□□□ -2.05
TRAV11-201ENST00000539512 ANKRD36CQ5JPF3 1778 aa2.21□□□□□ -2.06
TRAV11-201ENST00000539512 A0A1B0GV50 99 aa2.21□□□□□ -2.06
TRAV11-201ENST00000539512 ACOX3O15254 700 aa2.21□□□□□ -2.06
TRAV11-201ENST00000539512 NSA2O95478 260 aaKnown RBP2.21□□□□□ -2.06
TRAV11-201ENST00000539512 ANGP03950 147 aaKnown RBP2.21□□□□□ -2.06
TRAV11-201ENST00000539512 MSMBP08118 114 aa2.21□□□□□ -2.06
TRAV11-201ENST00000539512 CCR7P32248 378 aa2.21□□□□□ -2.06
TRAV11-201ENST00000539512 MAP2K4P45985 399 aa2.21□□□□□ -2.06
TRAV11-201ENST00000539512 EMX1Q04741 257 aaPredicted RBP2.21□□□□□ -2.06
TRAV11-201ENST00000539512 ITGB3BPQ13352 177 aaPredicted RBP2.21□□□□□ -2.06
TRAV11-201ENST00000539512 ATRQ13535 2644 aa2.21□□□□□ -2.06
TRAV11-201ENST00000539512 TNFAIP8L3Q5GJ75 292 aa2.21□□□□□ -2.06
TRAV11-201ENST00000539512 CDKL4Q5MAI5 379 aa2.21□□□□□ -2.06
TRAV11-201ENST00000539512 GLT8D1Q68CQ7 371 aa2.21□□□□□ -2.06
TRAV11-201ENST00000539512 ANKRD7Q92527 254 aa2.21□□□□□ -2.06
TRAV11-201ENST00000539512 MRPS26Q9BYN8 205 aaKnown RBP2.21□□□□□ -2.06
TRAV11-201ENST00000539512 CHST6Q9GZX3 395 aa2.21□□□□□ -2.06
TRAV11-201ENST00000539512 LSM5Q9Y4Y9 91 aaKnown RBP2.21□□□□□ -2.06
TRAV11-201ENST00000539512 CELSR1Q9NYQ6 3014 aa2.21□□□□□ -2.06
TRAV11-201ENST00000539512 USP9YO00507 2555 aaPredicted RBP2.21□□□□□ -2.06
TRAV11-201ENST00000539512 NUP98P52948 1817 aa2.21□□□□□ -2.06
TRAV11-201ENST00000539512 CRYBG3Q68DQ2 2970 aa2.21□□□□□ -2.06
TRAV11-201ENST00000539512 PDZD2O15018 2839 aa2.21□□□□□ -2.06
TRAV11-201ENST00000539512 ROBO3Q96MS0 1386 aa2.21□□□□□ -2.06
TRAV11-201ENST00000539512 MYO7AQ13402 2215 aa2.21□□□□□ -2.06
TRAV11-201ENST00000539512 LAMA1P25391 3075 aa2.21□□□□□ -2.06
TRAV11-201ENST00000539512 DOPEY2Q9Y3R5 2298 aa2.2□□□□□ -2.06
TRAV11-201ENST00000539512 PSME4Q14997 1843 aa2.2□□□□□ -2.06
TRAV11-201ENST00000539512 A0A0D9SEW6 157 aa2.2□□□□□ -2.06
TRAV11-201ENST00000539512 LST1O00453 97 aa2.2□□□□□ -2.06
TRAV11-201ENST00000539512 LEPROTO15243 131 aa2.2□□□□□ -2.06
TRAV11-201ENST00000539512 NOS1APO75052 506 aaPredicted RBP2.2□□□□□ -2.06
TRAV11-201ENST00000539512 ISG15P05161 165 aa2.2□□□□□ -2.06
TRAV11-201ENST00000539512 TRGC1P0CF51 173 aa2.2□□□□□ -2.06
TRAV11-201ENST00000539512 DEFA4P12838 97 aa2.2□□□□□ -2.06
TRAV11-201ENST00000539512 REG1BP48304 166 aa2.2□□□□□ -2.06
TRAV11-201ENST00000539512 PAIP2Q9BPZ3 127 aaKnown RBP2.2□□□□□ -2.06
TRAV11-201ENST00000539512 PAQR5Q9NXK6 330 aaPredicted RBP2.2□□□□□ -2.06
TRAV11-201ENST00000539512 TIMM22Q9Y584 194 aa2.2□□□□□ -2.06
TRAV11-201ENST00000539512 APC2O95996 2303 aa2.2□□□□□ -2.06
TRAV11-201ENST00000539512 TRPM6Q9BX84 2022 aa2.2□□□□□ -2.06
TRAV11-201ENST00000539512 KIF20BQ96Q89 1820 aa2.19□□□□□ -2.06
TRAV11-201ENST00000539512 NIPBLQ6KC79 2804 aaeCLIP2.19□□□□□ -2.06
TRAV11-201ENST00000539512 NBEAL2Q6ZNJ1 2754 aa2.19□□□□□ -2.06
TRAV11-201ENST00000539512 F8P00451 2351 aa2.19□□□□□ -2.06
TRAV11-201ENST00000539512 TRBV6-5A0A0K0K1A5 114 aa2.19□□□□□ -2.06
TRAV11-201ENST00000539512 C21orf140B9A014 251 aa2.19□□□□□ -2.06
TRAV11-201ENST00000539512 SRP19P09132 144 aaKnown RBP2.19□□□□□ -2.06
TRAV11-201ENST00000539512 GPX2P18283 190 aa2.19□□□□□ -2.06
TRAV11-201ENST00000539512 CCL1P22362 96 aa2.19□□□□□ -2.06
TRAV11-201ENST00000539512 MARCKSL1P49006 195 aa2.19□□□□□ -2.06
TRAV11-201ENST00000539512 AQP4P55087 323 aa2.19□□□□□ -2.06
TRAV11-201ENST00000539512 NAA20P61599 178 aa2.19□□□□□ -2.06
TRAV11-201ENST00000539512 NDUFA5Q16718 116 aa2.19□□□□□ -2.06
TRAV11-201ENST00000539512 ACSM3Q53FZ2 586 aa2.19□□□□□ -2.06
TRAV11-201ENST00000539512 COQ5Q5HYK3 327 aa2.19□□□□□ -2.06
TRAV11-201ENST00000539512 C7orf65Q6ZTY9 151 aa2.19□□□□□ -2.06
TRAV11-201ENST00000539512 ZNF550Q7Z398 422 aa2.19□□□□□ -2.06
TRAV11-201ENST00000539512 ZNF565Q8N9K5 539 aa2.19□□□□□ -2.06
TRAV11-201ENST00000539512 C8orf76Q96K31 380 aa2.19□□□□□ -2.06
TRAV11-201ENST00000539512 CDK5RAP2Q96SN8 1893 aa2.18□□□□□ -2.06
TRAV11-201ENST00000539512 HIVEP1P15822 2718 aa2.18□□□□□ -2.06
TRAV11-201ENST00000539512 EVPLLA8MZ36 301 aa2.18□□□□□ -2.06
TRAV11-201ENST00000539512 SLC22A1O15245 554 aa2.18□□□□□ -2.06
TRAV11-201ENST00000539512 SULT1A3P0DMM9 295 aa2.18□□□□□ -2.06
TRAV11-201ENST00000539512 SULT1A4P0DMN0 295 aa2.18□□□□□ -2.06
TRAV11-201ENST00000539512 TCL1AP56279 114 aa2.18□□□□□ -2.06
TRAV11-201ENST00000539512 MAGOHP61326 146 aaKnown RBP2.18□□□□□ -2.06
TRAV11-201ENST00000539512 TNFAIP6P98066 277 aaPredicted RBP2.18□□□□□ -2.06
TRAV11-201ENST00000539512 ELOBQ15370 118 aa2.18□□□□□ -2.06
TRAV11-201ENST00000539512 NNATQ16517 81 aa2.18□□□□□ -2.06
TRAV11-201ENST00000539512 LPCAT4Q643R3 524 aa2.18□□□□□ -2.06
TRAV11-201ENST00000539512 OR1M1Q8NGA1 313 aa2.18□□□□□ -2.06
TRAV11-201ENST00000539512 MBD3L1Q8WWY6 194 aa2.18□□□□□ -2.06
TRAV11-201ENST00000539512 ITFG2Q969R8 447 aa2.18□□□□□ -2.06
TRAV11-201ENST00000539512 CSMD2Q7Z408 3487 aa2.18□□□□□ -2.06
TRAV11-201ENST00000539512 STAB1Q9NY15 2570 aa2.18□□□□□ -2.06
TRAV11-201ENST00000539512 CELSR2Q9HCU4 2923 aa2.18□□□□□ -2.06
TRAV11-201ENST00000539512 ANKHD1Q8IWZ3 2542 aaKnown RBP2.17□□□□□ -2.06
TRAV11-201ENST00000539512 FLNAP21333 2647 aaKnown RBP2.17□□□□□ -2.06
TRAV11-201ENST00000539512 MEIS3P1A6NDR6 274 aa2.17□□□□□ -2.06
TRAV11-201ENST00000539512 DCTN3O75935 186 aa2.17□□□□□ -2.06
TRAV11-201ENST00000539512 CIAO1O76071 339 aa2.17□□□□□ -2.06
TRAV11-201ENST00000539512 CD200R1LQ6Q8B3 271 aa2.17□□□□□ -2.06
TRAV11-201ENST00000539512 C10orf67Q8IYJ2 551 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms