RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 ANAPC10Q9UM13 185 aa8.44□□□□□ -1.06
YBX3-207ENST00000539204 LINC00588Q9Y4M8 146 aa8.44□□□□□ -1.06
YBX3-207ENST00000539204 ALG5Q9Y673 324 aa8.44□□□□□ -1.06
YBX3-207ENST00000539204 HMCN2Q8NDA2 5059 aa8.44□□□□□ -1.06
YBX3-207ENST00000539204 CCNKO75909 580 aa8.43□□□□□ -1.06
YBX3-207ENST00000539204 NDUFB6O95139 128 aa8.43□□□□□ -1.06
YBX3-207ENST00000539204 TBPP20226 339 aa8.43□□□□□ -1.06
YBX3-207ENST00000539204 CBX5P45973 191 aa8.43□□□□□ -1.06
YBX3-207ENST00000539204 CCR6P51684 374 aa8.43□□□□□ -1.06
YBX3-207ENST00000539204 AP2S1P53680 142 aaPredicted RBP8.43□□□□□ -1.06
YBX3-207ENST00000539204 SNRPD3P62318 126 aaKnown RBP8.43□□□□□ -1.06
YBX3-207ENST00000539204 STEAP1BQ6NZ63 245 aa8.43□□□□□ -1.06
YBX3-207ENST00000539204 PINX1Q96BK5 328 aaKnown RBP8.43□□□□□ -1.06
YBX3-207ENST00000539204 NARS2Q96I59 477 aaKnown RBP8.43□□□□□ -1.06
YBX3-207ENST00000539204 ST6GAL2Q96JF0 529 aa8.43□□□□□ -1.06
YBX3-207ENST00000539204 C17orf77Q96MU5 243 aa8.43□□□□□ -1.06
YBX3-207ENST00000539204 NUDT15Q9NV35 164 aa8.43□□□□□ -1.06
YBX3-207ENST00000539204 FKBP11Q9NYL4 201 aa8.43□□□□□ -1.06
YBX3-207ENST00000539204 NSG2Q9Y328 171 aa8.43□□□□□ -1.06
YBX3-207ENST00000539204 YTHDF2Q9Y5A9 579 aaKnown RBP8.43□□□□□ -1.06
YBX3-207ENST00000539204 A0A1B0GU03 582 aa8.42□□□□□ -1.06
YBX3-207ENST00000539204 TMEM235A6NFC5 223 aa8.42□□□□□ -1.06
YBX3-207ENST00000539204 MARCH11A6NNE9 402 aa8.42□□□□□ -1.06
YBX3-207ENST00000539204 IL5P05113 134 aa8.42□□□□□ -1.06
YBX3-207ENST00000539204 CRYBB3P26998 211 aa8.42□□□□□ -1.06
YBX3-207ENST00000539204 HOXA1P49639 335 aaPredicted RBP8.42□□□□□ -1.06
YBX3-207ENST00000539204 RRAS2P62070 204 aaPredicted RBP8.42□□□□□ -1.06
YBX3-207ENST00000539204 CD300CQ08708 224 aa8.42□□□□□ -1.06
YBX3-207ENST00000539204 MEF2DQ14814 521 aa8.42□□□□□ -1.06
YBX3-207ENST00000539204 TTC32Q5I0X7 151 aa8.42□□□□□ -1.06
YBX3-207ENST00000539204 SYT8Q8NBV8 401 aa8.42□□□□□ -1.06
YBX3-207ENST00000539204 OR4C16Q8NGL9 310 aa8.42□□□□□ -1.06
YBX3-207ENST00000539204 COMMD9Q9P000 198 aa8.42□□□□□ -1.06
YBX3-207ENST00000539204 ANXA10Q9UJ72 324 aa8.42□□□□□ -1.06
YBX3-207ENST00000539204 LOC102723971A0A1B0GUV8 181 aa8.41□□□□□ -1.06
YBX3-207ENST00000539204 RAB3DO95716 219 aa8.41□□□□□ -1.06
YBX3-207ENST00000539204 TMEM50AO95807 157 aa8.41□□□□□ -1.06
YBX3-207ENST00000539204 HBE1P02100 147 aa8.41□□□□□ -1.06
YBX3-207ENST00000539204 CD3DP04234 171 aa8.41□□□□□ -1.06
YBX3-207ENST00000539204 FCGR2CP31995 323 aa8.41□□□□□ -1.06
YBX3-207ENST00000539204 FXYD7P58549 80 aa8.41□□□□□ -1.06
YBX3-207ENST00000539204 ARPC4P59998 168 aa8.41□□□□□ -1.06
YBX3-207ENST00000539204 USF2Q15853 346 aaPredicted RBP8.41□□□□□ -1.06
YBX3-207ENST00000539204 SSX7Q7RTT5 188 aa8.41□□□□□ -1.06
YBX3-207ENST00000539204 TCTE3Q8IZS6 198 aa8.41□□□□□ -1.06
YBX3-207ENST00000539204 OR51H1Q8NH63 302 aa8.41□□□□□ -1.06
YBX3-207ENST00000539204 SLC25A21Q9BQT8 299 aaPredicted RBP8.41□□□□□ -1.06
YBX3-207ENST00000539204 C20orf85Q9H1P6 137 aa8.41□□□□□ -1.06
YBX3-207ENST00000539204 PRNDQ9UKY0 176 aa8.41□□□□□ -1.06
YBX3-207ENST00000539204 TRAV6A0A075B6T7 132 aa8.4□□□□□ -1.06
YBX3-207ENST00000539204 SNRPGP15A8MWD9 76 aa8.4□□□□□ -1.06
YBX3-207ENST00000539204 EREGO14944 169 aa8.4□□□□□ -1.06
YBX3-207ENST00000539204 SSX5O60225 188 aa8.4□□□□□ -1.06
YBX3-207ENST00000539204 KRASP01116 189 aa8.4□□□□□ -1.06
YBX3-207ENST00000539204 IFNA5P01569 189 aa8.4□□□□□ -1.06
YBX3-207ENST00000539204 HLA-DRB4P13762 266 aa8.4□□□□□ -1.06
YBX3-207ENST00000539204 GNG2P59768 71 aa8.4□□□□□ -1.06
YBX3-207ENST00000539204 CLINT1Q14677 625 aa8.4□□□□□ -1.06
YBX3-207ENST00000539204 AADACL3Q5VUY0 350 aa8.4□□□□□ -1.06
YBX3-207ENST00000539204 Q6ZSN1 163 aa8.4□□□□□ -1.06
YBX3-207ENST00000539204 TMEM230Q96A57 120 aa8.4□□□□□ -1.06
YBX3-207ENST00000539204 SLC5A7Q9GZV3 580 aa8.4□□□□□ -1.06
YBX3-207ENST00000539204 MED28Q9H204 178 aa8.4□□□□□ -1.06
YBX3-207ENST00000539204 SEPSECSQ9HD40 501 aaKnown RBP8.4□□□□□ -1.06
YBX3-207ENST00000539204 MCUBQ9NWR8 336 aa8.4□□□□□ -1.06
YBX3-207ENST00000539204 SCP2D1Q9UJQ7 156 aa8.4□□□□□ -1.06
YBX3-207ENST00000539204 GOLT1BQ9Y3E0 138 aa8.4□□□□□ -1.06
YBX3-207ENST00000539204 HLA-DRB4X5D2U9 266 aa8.4□□□□□ -1.06
YBX3-207ENST00000539204 DISC1C4P0D8 188 aa8.39□□□□□ -1.07
YBX3-207ENST00000539204 F5H768 121 aa8.39□□□□□ -1.07
YBX3-207ENST00000539204 IGKV3-20P01619 116 aa8.39□□□□□ -1.07
YBX3-207ENST00000539204 FUSP35637 526 aaKnown RBP eCLIP8.39□□□□□ -1.07
YBX3-207ENST00000539204 RRN3P1Q2M238 152 aa8.39□□□□□ -1.07
YBX3-207ENST00000539204 CDPF1Q6NVV7 123 aa8.39□□□□□ -1.07
YBX3-207ENST00000539204 ZNF114Q8NC26 417 aa8.39□□□□□ -1.07
YBX3-207ENST00000539204 OR4D10Q8NGI6 311 aa8.39□□□□□ -1.07
YBX3-207ENST00000539204 OR51S1Q8NGJ8 323 aa8.39□□□□□ -1.07
YBX3-207ENST00000539204 PRRT1Q99946 306 aa8.39□□□□□ -1.07
YBX3-207ENST00000539204 KRTAP1-5Q9BYS1 174 aa8.39□□□□□ -1.07
YBX3-207ENST00000539204 Q9H3A6 140 aa8.39□□□□□ -1.07
YBX3-207ENST00000539204 GPN1Q9HCN4 374 aaPredicted RBP8.39□□□□□ -1.07
YBX3-207ENST00000539204 IFT46Q9NQC8 304 aa8.39□□□□□ -1.07
YBX3-207ENST00000539204 A0A1W2PPQ1 181 aa8.38□□□□□ -1.07
YBX3-207ENST00000539204 MEIS3P1A6NDR6 274 aa8.38□□□□□ -1.07
YBX3-207ENST00000539204 FAM90A26D6RGX4 464 aa8.38□□□□□ -1.07
YBX3-207ENST00000539204 PPYP01298 95 aa8.38□□□□□ -1.07
YBX3-207ENST00000539204 G6PCP35575 357 aa8.38□□□□□ -1.07
YBX3-207ENST00000539204 LPAR6P43657 344 aa8.38□□□□□ -1.07
YBX3-207ENST00000539204 ERHP84090 104 aaKnown RBP8.38□□□□□ -1.07
YBX3-207ENST00000539204 RNASE10Q5GAN6 216 aaKnown RBP8.38□□□□□ -1.07
YBX3-207ENST00000539204 ZNF818PQ6ZRF7 136 aa8.38□□□□□ -1.07
YBX3-207ENST00000539204 HOGA1Q86XE5 327 aa8.38□□□□□ -1.07
YBX3-207ENST00000539204 NUDCD2Q8WVJ2 157 aa8.38□□□□□ -1.07
YBX3-207ENST00000539204 FLVCR2Q9UPI3 526 aa8.38□□□□□ -1.07
YBX3-207ENST00000539204 DBX1A6NMT0 343 aa8.37□□□□□ -1.07
YBX3-207ENST00000539204 KRTAP29-1A8MX34 341 aaPredicted RBP8.37□□□□□ -1.07
YBX3-207ENST00000539204 C1QBP02746 253 aa8.37□□□□□ -1.07
YBX3-207ENST00000539204 SULT1A3P0DMM9 295 aa8.37□□□□□ -1.07
YBX3-207ENST00000539204 SULT1A4P0DMN0 295 aa8.37□□□□□ -1.07
YBX3-207ENST00000539204 DEFB130BP0DP73 79 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms